BAC Information

Click to search

BAC

Clone NameB6Ng01-067C18
Chromosome9 (Build37)
Map Location 101,578,838 - 101,579,313
singlet/doubletsinglet
Overlap genenone
Upstream geneStag1, LOC100040990, Pccb, LOC100041013, LOC100040707, Msl2l1, 3222402P14Rik, LOC100041065, EG382099
Downstream geneEphb1, 9630041A04Rik, Ky, LOC664843, Cep63, Anapc13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067C18.bB6Ng01-067C18.g
ACCDH886142DH886143
length4701,163
definitionDH886142|Mus musculus domesticus DNA, BAC clone: B6Ng01-067C18, 5' end.DH886143|Mus musculus domesticus DNA, BAC clone: B6Ng01-067C18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
caatgagttccaatacatttattattcactgagagagaaagtgcttcctt
ttatgtctggaactaaacctggatcacatttggcaggatatccctagtca
cagacttggggatttggtaagtctatggctgtggacccacaaaattgtgt
gatccctcacctctcagcctttcagacaacacccatttatctgctcgtct
cagaatctttacctcttgagtcttttaggaatgtagcacccaggacatcc
ttcaaccaccgtgcttcatagaaaaatcaagattgttttctgtaagggaa
gaaagactcctgcttataggatatgatcacgtggtgtgacaacacacggt
atctagctgagacactatatggagaaatcctgcatctgaaaccccttatg
tttgtgggccttgtctatggatgaccagatgattaacacagaagaatgga
ggggttgggggagaggggag
gaattctctcctgaggaatatggaatggctgagaagcacctgaaaaaatg
ctcagcatcctcaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagacagaatggctaagataaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcacgcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactataggaggatactgcaatacctctcctggga
atatatccagaagatgtcccaaccagtaagaaggacacatgctccactat
gttcttagcagccttatttataatagccagaagctggaaagaacccagat
gcccccaaacagaggaatggataccaaaaatttggtacatttacacaatg
gaatactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
agaactcaaatgatatgtactcactaagtggatattagcccagaaactta
gcatacctgagatataagatacaatttgcaaaatacatgaaactgaagaa
gaacgaagaccaaagtgtggacactttgactcttcttagaattggaaaca
atcacccatggaaggagttacagagacaaagtttggagctgagacaaaag
gctggaccatctagagactgccatatccagagatccattccataattagc
ctctaaacgatgacaccattgcatacactagcaagattttgctgaaagga
ccctggtatagctgtctcttgtgagactaggccggggcctagcaaacaca
taagtagatgctcacagtcagctattggatggagcacagggctcccagtg
gaggagctagagaaagtatccaaggactaagagatttgcaccctgtagtg
caacaacattatgaactaaccagtacccggactcttgactctagctgcat
ttgtatcaaagataactagtcggcatcactggaaaggaagctatggactt
gcaacttttatgcctattacagggaatgtcagggccaaaatggaatgggt
gtgcaagggaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_101578838_101579313
seq2: B6Ng01-067C18.b_44_519

seq1  GAATTCCAATGAGTTCCAATACATTTATTATTCACTGAGAGAGAAAGTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATGAGTTCCAATACATTTATTATTCACTGAGAGAGAAAGTGC  50

seq1  TTCCTTTTATGTCTGGAACTAAACCTGGATCACATTTGGCAGGATATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTATGTCTGGAACTAAACCTGGATCACATTTGGCAGGATATCCC  100

seq1  TAGTCACAGACTTGGGGATTTGGTAAGTCTATGGCTGTGGACCCACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACAGACTTGGGGATTTGGTAAGTCTATGGCTGTGGACCCACAAAA  150

seq1  TTGTGTGATCCCTCACCTCTCAGCCTTTCAGACAACACCCATTTATCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGATCCCTCACCTCTCAGCCTTTCAGACAACACCCATTTATCTGC  200

seq1  TCGTCTCAGAATCTTTACCTCTTGAGTCTTTTAGGAATGTAGCACCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCTCAGAATCTTTACCTCTTGAGTCTTTTAGGAATGTAGCACCCAGG  250

seq1  ACATCCTTCAACCACCGTGCTTCATAGAAAAATCAAGATTGTTTTCTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTTCAACCACCGTGCTTCATAGAAAAATCAAGATTGTTTTCTGTA  300

seq1  AGGGAAGAAAGACTCCTGCTTATAGGATATGATCACGTGGTGTGACAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGAAAGACTCCTGCTTATAGGATATGATCACGTGGTGTGACAACA  350

seq1  CACGGTATCTAGCTGAGACACTATATGGAGAAATCCTGCATCTGAAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTATCTAGCTGAGACACTATATGGAGAAATCCTGCATCTGAAACCC  400

seq1  CTTATGTTTGTGGGCCTTGTCTATGGATGACCAGATGATTAACACAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATGTTTGTGGGCCTTGTCTATGGATGACCAGATGATTAACACAGAAG  450

seq1  AATGGAGGGGTTGGGGGAGAGGGGAG  476
      ||||||||||||||||||||||||||
seq2  AATGGAGGGGTTGGGGGAGAGGGGAG  476