BAC Information

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BAC

Clone NameB6Ng01-068F16
Chromosome9 (Build37)
Map Location 13,802,758 - 13,963,771
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665285, LOC100039729, LOC100039758, Maml2, Mtmr2, Cep57, 2810485I05Rik, LOC665329
Downstream geneSesn3, Endod1, LOC665351, EG547035, Jmjd2d, 0610040D20Rik, Amotl1, EG665374, Piwil4, Fut4, 1700012B09Rik, Ankrd49, Mre11a, LOC100040259, Gpr83, Folr4, Panx1, Hephl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068F16.bB6Ng01-068F16.g
ACCDH886967DH886968
length618852
definitionDH886967|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F16, 5' end.DH886968|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,963,154 - 13,963,771)(13,802,758 - 13,803,611)
sequence
gaattctctagtattttctttcctaaaatgaggtaggacaatgatgcagt
cttccagagaatttaatttagatttgaggaaaattgaaaatgttgatgtc
tagagaaaggccaggaagttggtcagtcccagatgtaaaataagcaaaca
taggcaaggattgtttattccttagtagaggacccagagcagggagacag
caagtctctcttcagggtcttagagagaccttagacacaccttcccttct
attctaaatttccttgacacacaggaggtgctcagcagagattttgttaa
agaaattaattgttcttggtgtattcagtaatcgtgaaagaatataacgc
tcagacgttatctgtgtggaaaacaagtaggtatggggatgggaacataa
acaggggctctaaggggcaggagaagtggttgctcctggggagagagctg
gtgtcctgtgcacagccaggtctgtcatcctgtgttctctggggacaaag
cctgaacccttactctgacgctaagcacctattttaggaaacattgtctg
actaggaatcagcagctgtctaccgtccagggcagcaccactgagggcag
gggtggggtggggtgggt
gaattcactagagggaagcatgcctgttaagtaagacgttgtgggctatc
tagggtcattgtactttccttcttttgaggaattacccttcttttatagg
aattctcatacaacccgtggcggaatcattttcactgaccttagggctgg
gctggtttagccttgtggatcagagtcccccacacctgatgctaaagtac
tctctgtacagatgatcatgacatacacgttaggtttcacagtctttcga
aggcttcatcactgctagttgtggctatatttaaaaagtgtggggtggct
tttcaatcaatcttaaacatcagaaacagttgaattgaggagttatgatt
tgtaactgtaaatttcacagctaacactcagtttgatatagtctttccta
atcttcagagttgattgttttaagttccctgtcccttgtagtaatccaat
ccccacatagctacatctactaaaaggagactccaaaccttatctggtac
gaattctaaattcttagagtgagtcaaattcaaacacaactccacgtgac
acggaggaagatcccctacgtctttctgggtaagaaagagtagatgaggg
agggagggaggtgccaacagtaagccatgtatgtgccctgctgtcacagt
gagattttatgcatcccctaggttcctttcagacctaagacaaactcatt
tataaaaacagaagttgggtacaactgactcaaggctggcctaaaactct
cgagatagctgaggataaccttgaatgtcttctttcctgcctcaggcttg
ggaaatacaaacacgccaccttctccagttaaaattggctttaaatcttt
tt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_13963154_13963771
seq2: B6Ng01-068F16.b_49_666 (reverse)

seq1  ACCCACCCCACCCCACCCCTGCCCTCAGTGGTGCTGCCCTGGACGGTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACCCCACCCCACCCCTGCCCTCAGTGGTGCTGCCCTGGACGGTAGA  50

seq1  CAGCTGCTGATTCCTAGTCAGACAATGTTTCCTAAAATAGGTGCTTAGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCTGATTCCTAGTCAGACAATGTTTCCTAAAATAGGTGCTTAGCG  100

seq1  TCAGAGTAAGGGTTCAGGCTTTGTCCCCAGAGAACACAGGATGACAGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGTAAGGGTTCAGGCTTTGTCCCCAGAGAACACAGGATGACAGACC  150

seq1  TGGCTGTGCACAGGACACCAGCTCTCTCCCCAGGAGCAACCACTTCTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTGCACAGGACACCAGCTCTCTCCCCAGGAGCAACCACTTCTCCT  200

seq1  GCCCCTTAGAGCCCCTGTTTATGTTCCCATCCCCATACCTACTTGTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTTAGAGCCCCTGTTTATGTTCCCATCCCCATACCTACTTGTTTTC  250

seq1  CACACAGATAACGTCTGAGCGTTATATTCTTTCACGATTACTGAATACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGATAACGTCTGAGCGTTATATTCTTTCACGATTACTGAATACAC  300

seq1  CAAGAACAATTAATTTCTTTAACAAAATCTCTGCTGAGCACCTCCTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACAATTAATTTCTTTAACAAAATCTCTGCTGAGCACCTCCTGTGT  350

seq1  GTCAAGGAAATTTAGAATAGAAGGGAAGGTGTGTCTAAGGTCTCTCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGAAATTTAGAATAGAAGGGAAGGTGTGTCTAAGGTCTCTCTAAG  400

seq1  ACCCTGAAGAGAGACTTGCTGTCTCCCTGCTCTGGGTCCTCTACTAAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGAAGAGAGACTTGCTGTCTCCCTGCTCTGGGTCCTCTACTAAGGA  450

seq1  ATAAACAATCCTTGCCTATGTTTGCTTATTTTACATCTGGGACTGACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACAATCCTTGCCTATGTTTGCTTATTTTACATCTGGGACTGACCAA  500

seq1  CTTCCTGGCCTTTCTCTAGACATCAACATTTTCAATTTTCCTCAAATCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGCCTTTCTCTAGACATCAACATTTTCAATTTTCCTCAAATCTA  550

seq1  AATTAAATTCTCTGGAAGACTGCATCATTGTCCTACCACATTTTAGGAAA  600
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AATTAAATTCTCTGGAAGACTGCATCATTGTCCTACCTCATTTTAGGAAA  600

seq1  GAAAATACTAGAGAATTC  618
      ||||||||||||||||||
seq2  GAAAATACTAGAGAATTC  618

seq1: chr9_13802758_13803611
seq2: B6Ng01-068F16.g_70_921

seq1  GAATTCACTAGAGGGAAGCATGCCTGTTAAGTAAGACGTTGTGGGCTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAGAGGGAAGCATGCCTGTTAAGTAAGACGTTGTGGGCTATC  50

seq1  TAGGGTCATTGTACTTTCCTTCTTTTGAGGAATTACCCTTCTTTTATAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGTCATTGTACTTTCCTTCTTTTGAGGAATTACCCTTCTTTTATAGG  100

seq1  AATTCTCATACAACCCGTGGCGGAATCATTTTCACTGACCTTAGGGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCATACAACCCGTGGCGGAATCATTTTCACTGACCTTAGGGCTGG  150

seq1  GCTGGTTTAGCCTTGTGGATCAGAGTCCCCCACACCTGATGCTAAAGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTTAGCCTTGTGGATCAGAGTCCCCCACACCTGATGCTAAAGTAC  200

seq1  TCTCTGTACAGATGATCATGACATACACGTTAGGTTTCACAGTCTTTCGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTACAGATGATCATGACATACACGTTAGGTTTCACAGTCTTTCGA  250

seq1  AGGCTTCATCACTGCTAGTTGTGGCTATATTTAAAAAGTGTGGGGTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTCATCACTGCTAGTTGTGGCTATATTTAAAAAGTGTGGGGTGGCT  300

seq1  TTTCAATCAATCTTAAACATCAGAAACAGTTGAATTGAGGAGTTATGATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATCAATCTTAAACATCAGAAACAGTTGAATTGAGGAGTTATGATT  350

seq1  TGTAACTGTAAATTTCACAGCTAACACTCAGTTTGATATAGTCTTTCCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTGTAAATTTCACAGCTAACACTCAGTTTGATATAGTCTTTCCTA  400

seq1  ATCTTCAGAGTTGATTGTTTTAAGTTCCCTGTCCCTTGTAGTAATCCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCAGAGTTGATTGTTTTAAGTTCCCTGTCCCTTGTAGTAATCCAAT  450

seq1  CCCCACATAGCTACATCTACTAAAAGGAGACTCCAAACCTTATCTGGTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACATAGCTACATCTACTAAAAGGAGACTCCAAACCTTATCTGGTAC  500

seq1  GAATTCTAAATTCTTAGAGTGAGTCAAATTCAAACACAACTCCACGTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAATTCTTAGAGTGAGTCAAATTCAAACACAACTCCACGTGAC  550

seq1  ACGGAGGAAGATCCCCTACGTCTTTCTGGGTAAGAAAGAGTAGATGAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAGGAAGATCCCCTACGTCTTTCTGGGTAAGAAAGAGTAGATGAGGG  600

seq1  AGGGAGGGAGGTGCCAACAGTAAGCCATGTATGTGCCCTGCTGTCACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGAGGTGCCAACAGTAAGCCATGTATGTGCCCTGCTGTCACAGT  650

seq1  GAGATTTTATGCATCCCCTAGGTTCCTTTCAGACCTAAGACAAACTCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTTATGCATCCCCTAGGTTCCTTTCAGACCTAAGACAAACTCATT  700

seq1  TAT-AAAACAGAAGTTGGGTACAACTGACTCAAGGCTGGCCTAGAACTCT  749
      ||| ||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATAAAAACAGAAGTTGGGTACAACTGACTCAAGGCTGGCCTAAAACTCT  750

seq1  CGAGATAGCTGAGGATAACCTTGAATGTCTTCTTTCCCTGCCTCAGGCTT  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CGAGATAGCTGAGGATAACCTTGAATGTCTTCTTT-CCTGCCTCAGGCTT  799

seq1  GGGAATTACAAACACGCCACCATCTCCAGTTTAAATTGCCTTTTAGAGTC  849
      ||||| ||||||||||||||| ||||||||| |||||| ||||   | ||
seq2  GGGAAATACAAACACGCCACCTTCTCCAGTTAAAATTGGCTTT--AAATC  847

seq1  TTTTT  854
      |||||
seq2  TTTTT  852