BAC Information

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BAC

Clone NameB6Ng01-073G23
Chromosome9 (Build37)
Map Location 64,154,149 - 64,355,489
singlet/doubletdoublet
Overlap geneDis3l, Megf11
Upstream geneMap2k5, 2300009A05Rik, Iqch, LOC621763, 2310007F21Rik, Smad3, LOC100040009, Smad6, 2600006L11Rik, Lctl, Zwilch, Rpl4, Snapc5, Map2k1, Uchl4, Tipin
Downstream geneRab11a, AI115600, F730015K02Rik, Slc24a1, 2010321M09Rik, Ptplad1, Dpp8, Nope, Punc, Parp16, Cilp, Clpx, Pdcd7, Gm514, 5430433E21Rik, Rasl12, Ostb, Mtfmt, Spg21, Ankdd1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073G23.bB6Ng01-073G23.g
ACCDH890568DH890569
length1,069614
definitionDH890568|Mus musculus domesticus DNA, BAC clone: B6Ng01-073G23, 5' end.DH890569|Mus musculus domesticus DNA, BAC clone: B6Ng01-073G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,354,405 - 64,355,489)(64,154,149 - 64,154,761)
sequence
gaattcaaacccagatcagtcaaattgcaaagctaccaggtcctacccta
atgcctggtaccagttctctctggtggctctctggcctttcagagcattt
ctgaaagagtaaggcaggaggggctggtgtgaggactgagactttaggag
gagtcaaagggggcattgataagaaaagcccccgtcactggcagtgccgc
agatccaagatggccattagaaacagaagaaacgacaaggaccttgaagg
cagagccctttctgttcctctacataccacagggctgcccttgtctcctc
ctctgtggagaatagaaaggctggagtcctttcagcctgcttcacacgga
atcctgggctgggttgggaggctagtccttcagccgcagtctggacaacc
ctctcaaatctttaaaattctcacctcatgacaaacgacaatgatggcct
catgggaaatctgtgatatttgggaatgcgttaagctaaggtcattctac
tttgtcaaaagcctgtaatgggtaagctggcctcacaagaagctacttcc
cacacacaggaaagcaggccctggcctggaagtgtgtgtgtgtgtgtgta
tgtagctctcagataaaaaatgattcatagttgacacagaagtcactggg
ccatgggaagtccctgctacacgggaagactcccaagtctttcagatagg
gagggagagaaaacttacacgctgatacatcacatgagagggaccgccat
tgctcctgactcccctagccttgtgtgcccccattgtagggagctggaca
ggtagtccctggggccaggctgctctgggggaggatgctggaccaagcta
ctacagcccagagacgatggtgccgctgtcagcatggcactccaggtcat
caaaaagctccccgagatccatcatttagccaattatcagtcctggaaac
agcctatttaataagcagcctctcctcccctgccccagggtaatgaacgc
tgtgtacctctctagaaaagtggcccccctttggaaccaactcggtctgg
gtcagcatacaagagatca
gaattcaagggtgggaagagactttgaggtaagacatagggtgcagccca
ctactcttatgtcttcagctggtgccagaataattgggcaagtgtaaatt
aacatgaagtaagaattttggagaaggtaggcaggactgtcttacctaaa
atggctaaaattttacctaatgtcagaggaactcaagtgtgtctgtaaaa
tttacaaaagtaaacttcatttgagctagacagtggcagcacatgcctct
aatcccagcacctgggggcggaggcaggcagatctcttgagtttgagcca
gcctgatacgctgagtaagttgcagaacagccagggatacatagtgaaag
cctgtcttgaaacaccaaaaccaaccaaccaaacttcatttgaaagaatc
aatttgagccaagtgtggtggcatatatctttaatcccaacagtctgaag
acagaggcaagaggtgtttaaaaaaaaaaaaaagctgggcgtggtggcac
acacctttaaccccagcacttgggaggcagaggtgggcggatttcttaat
tcaaggacagtctggtttacatagtgagttccaggacagcaagggctaca
cagataaaaccctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_64354405_64355489
seq2: B6Ng01-073G23.b_45_1113 (reverse)

seq1  TGATCTCTTGTATTCTTGAGCCAGAACCGAGTTTGTTCCAAAGTGTGGCT  50
      ||||||||||||| | ||| |||| |||||||| ||||||||| | ||| 
seq2  TGATCTCTTGTATGC-TGACCCAG-ACCGAGTTGGTTCCAAAGGGGGGC-  47

seq1  CCATTGTCTTGGGAGGCTACACAGCCTTCCATTACCCTGGGGCCGGGTGA  100
      |  || ||| | |||| |||||||| || |||||||||||||| ||  | 
seq2  CACTTTTCTAGAGAGG-TACACAGCGTT-CATTACCCTGGGGCAGG--GG  93

seq1  ATGAGAGGCTGCTTATTAAAATAGGCTGTGTTCCTGGAACGTGAGTAATT  150
      | ||||||||||||||| ||||||||||| |||| |||   ||| ||| |
seq2  AGGAGAGGCTGCTTATT-AAATAGGCTGT-TTCCAGGA--CTGA-TAA-T  137

seq1  TTGCTAAATTATTGAGTCTCTGTGGAGCTTTCTTGATGACCTGGAGTGTG  200
      | ||||||| || || |||| | |||||||| ||||||||||||||||  
seq2  TGGCTAAATGATGGA-TCTC-GGGGAGCTTT-TTGATGACCTGGAGTG-C  183

seq1  CATGCTGACAGCGGCACCATCCGTCTCTGGGCTGTAGTAGCTTGGTCCAG  250
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CATGCTGACAGCGGCACCAT-CGTCTCTGGGCTGTAGTAGCTTGGTCCAG  232

seq1  CATCCT-CCCCAGAGCAGCCTGGCCCCAGGGACTACCTGTCCAGCTCCCT  299
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTCCCCCAGAGCAGCCTGGCCCCAGGGACTACCTGTCCAGCTCCCT  282

seq1  ACAATGGGGGCACACAAGGCTAGGGGAGTCAGGAGCAATGGCGGTCCCTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGGGGCACACAAGGCTAGGGGAGTCAGGAGCAATGGCGGTCCCTC  332

seq1  TCCTGTGATGTATCAGCGTGTAAGTTTTCTCTCCCTCCCTATCTG-AAGA  398
      || |||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCATGTGATGTATCAGCGTGTAAGTTTTCTCTCCCTCCCTATCTGAAAGA  382

seq1  CTTGGGAGTCTTCCCGTGTAGCAGGGACTTCCCATGGCCCAGTGACTTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGAGTCTTCCCGTGTAGCAGGGACTTCCCATGGCCCAGTGACTTCT  432

seq1  GTGTCAACTATGAATCATTTTTTATCTGAGAGCTACATACACACACACAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAACTATGAATCATTTTTTATCTGAGAGCTACATACACACACACAC  482

seq1  ACACACTTCCAGGCCAGGGCCTGCTTTCCTGTGTGTGGGAAGTAGCTTCT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTTCCAGGCCAGGGCCTGCTTTCCTGTGTGTGGGAAGTAGCTTCT  532

seq1  TGTGAGGCCAGCTTACCCATTACAGGCTTTTGACAAAGTAGAATGACCTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGCCAGCTTACCCATTACAGGCTTTTGACAAAGTAGAATGACCTT  582

seq1  AGCTTAACGCATTCCCAAATATCACAGATTTCCCATGAGGCCATCATTGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAACGCATTCCCAAATATCACAGATTTCCCATGAGGCCATCATTGT  632

seq1  CGTTTGTCATGAGGTGAGAATTTTAAAGATTTGAGAGGGTTGTCCAGACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTGTCATGAGGTGAGAATTTTAAAGATTTGAGAGGGTTGTCCAGACT  682

seq1  GCGGCTGAAGGACTAGCCTCCCAACCCAGCCCAGGATTCCGTGTGAAGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGCTGAAGGACTAGCCTCCCAACCCAGCCCAGGATTCCGTGTGAAGCA  732

seq1  GGCTGAAAGGACTCCAGCCTTTCTATTCTCCACAGAGGAGGAGACAAGGG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAAAGGACTCCAGCCTTTCTATTCTCCACAGAGGAGGAGACAAGGG  782

seq1  CAGCCCTGTGGTATGTAGAGGAACAGAAAGGGCTCTGCCTTCAAGGTCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTGTGGTATGTAGAGGAACAGAAAGGGCTCTGCCTTCAAGGTCCT  832

seq1  TGTCGTTTCTTCTGTTTCTAATGGCCATCTTGGATCTGCGGCACTGCCAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGTTTCTTCTGTTTCTAATGGCCATCTTGGATCTGCGGCACTGCCAG  882

seq1  TGACGGGGGCTTTTCTTATCAATGCCCCCTTTGACTCCTCCTAAAGTCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGGGGGCTTTTCTTATCAATGCCCCCTTTGACTCCTCCTAAAGTCTC  932

seq1  AGTCCTCACACCAGCCCCTCCTGCCTTACTCTTTCAGAAATGCTCTGAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCACACCAGCCCCTCCTGCCTTACTCTTTCAGAAATGCTCTGAAA  982

seq1  GGCCAGAGAGCCACCAGAGAGAACTGGTACCAGGCATTAGGGTAGGACCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGAGAGCCACCAGAGAGAACTGGTACCAGGCATTAGGGTAGGACCT  1032

seq1  GGTAGCTTTGCAATTTGACTGATCTGGGTTTGAATTC  1085
      |||||||||||||||||||||||||||||||||||||
seq2  GGTAGCTTTGCAATTTGACTGATCTGGGTTTGAATTC  1069

seq1: chr9_64154149_64154761
seq2: B6Ng01-073G23.g_71_684

seq1  GAATTCAAGGGTGGGAAGAGACTTTGAGGTAAGACATAGGGTGCAGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGGTGGGAAGAGACTTTGAGGTAAGACATAGGGTGCAGCCCA  50

seq1  CTACTCTTATGTCTTCAGCTGGTGCCAGAATAATTGGGCAAGTGTAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCTTATGTCTTCAGCTGGTGCCAGAATAATTGGGCAAGTGTAAATT  100

seq1  AACATGAAGTAAGAATTTTGGAGAAGGTAGGCAGGACTGTCTTACCTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAGTAAGAATTTTGGAGAAGGTAGGCAGGACTGTCTTACCTAAA  150

seq1  ATGGCTAAAATTTTACCTAATGTCAGAGGAACTCAAGTGTGTCTGTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTAAAATTTTACCTAATGTCAGAGGAACTCAAGTGTGTCTGTAAAA  200

seq1  TTTACAAAAGTAAACTTCATTTGAGCTAGACAGTGGCAGCACATGCCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAAAAGTAAACTTCATTTGAGCTAGACAGTGGCAGCACATGCCTCT  250

seq1  AATCCCAGCACCTGGGGGCGGAGGCAGGCAGATCTCTTGAGTTTGAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGCACCTGGGGGCGGAGGCAGGCAGATCTCTTGAGTTTGAGCCA  300

seq1  GCCTGATACGCTGAGTAAGTTGCAGAACAGCCAGGGATACATAGTGAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGATACGCTGAGTAAGTTGCAGAACAGCCAGGGATACATAGTGAAAG  350

seq1  CCTGTCTTGAAACACCAAAACCAACCAACCAAACTTCATTTGAAAGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTTGAAACACCAAAACCAACCAACCAAACTTCATTTGAAAGAATC  400

seq1  AATTTGAGCCAAGTGTGGTGGCATATATCTTTAATCCCAACAGTCTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGAGCCAAGTGTGGTGGCATATATCTTTAATCCCAACAGTCTGAAG  450

seq1  ACAGAGGCAAGAGGTGTTTAAAAAAAAAAAAAAGCTGGGCGTGGTGGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGCAAGAGGTGTTTAAAAAAAAAAAAAAGCTGGGCGTGGTGGCAC  500

seq1  ACACCTTTAACCCCAGCACTTGGGAGGCAGAGGTGGGCGGATTTCTTAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTTAACCCCAGCACTTGGGAGGCAGAGGTGGGCGGATTTCTTAAT  550

seq1  TCAAGGACAGCCTGGTTTACATAGTGAGTTCCAGGACAGCAAGGGCTACA  600
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGACAGTCTGGTTTACATAGTGAGTTCCAGGACAGCAAGGGCTACA  600

seq1  CAGA-GAAACCCTC  613
      ||||  ||||||||
seq2  CAGATAAAACCCTC  614