BAC Information

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BAC

Clone NameB6Ng01-075B08
Chromosome9 (Build37)
Map Location 38,669,021 - 38,817,420
singlet/doubletdoublet
Overlap geneOlfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933, Olfr934, Olfr935
Upstream geneOlfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924, Olfr26
Downstream geneOlfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1, Olfr978, Olfr979, Olfr980
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075B08.bB6Ng01-075B08.g
ACCDH891741DH891742
length1,0601,239
definitionDH891741|Mus musculus domesticus DNA, BAC clone: B6Ng01-075B08, 5' end.DH891742|Mus musculus domesticus DNA, BAC clone: B6Ng01-075B08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,669,021 - 38,670,079)(38,816,181 - 38,817,420)
sequence
gaattctcagaaaagactctagaaataagtagcaaaattagaagaacagt
aagatgtgatagtactaaaacagcatggagaaaatatgttgcaaatcttt
atataaacaaatgaagaaaggtgttaaaattaaatagttctaggtataac
caagatgaatatgcactttaagacattatttctcaacccgtttgccatga
cccctttgagagttgtatatcaaacatcctacatgtcagatattttcata
ataccagcagatttacagttgtcaacatatataattttatattttgggga
tgcacaacatgaggaaattattaaatggttgcagcattaggaaggatgag
aaccactgctttaagatatagagatggccagtcaggtggcttatggggta
aaaatacttgatctctaaacttatgtcatggatccaatccacagaattcg
cataccagacagagaaaattcaagttgtcctccaaagtccacatgtacac
ataacatatatgttaacacacatgtcacatatacatatatgctcacatac
aggcacactgcaaatgcagagacaaaatagaaaaatatatacattaaccc
ttcttttgaattgctttgcaaggaatttctacgttctcattcccatactc
agaaaccaaaagtgtacatttttggcacattttaaacaaattttagtaga
aaattttcacaaaagaagtagtgcattcatagattgaaaaatacaatttg
gtaagaaatttccttttcaaactaaactatgtaatcaatacaataacaat
atgaaacttattagattgcttaatgataataaatacaccaaagcacaagt
gctggtgactagcctagcatccaggtaaactgagggaggaagtaatggat
ggtattggtgggttgtggggcaaaagttgcatttgacgggtcaaaatagc
ttattttagtaagttttctctttctttacctcttttgctatccatgagcc
caaatcactgacttctggtaattgaattctggctgttagcagcaagggaa
ttgatgaaaa
gaattcctctgtgatggttcttatatgttctgcccagggaatggcagaat
tagaaggtgtaaccctgttgaagtaggtgtgtcctttttggagaagtgtc
actgtgagtgaggtctttaagaccctcatcctagctgcttggaaaagagt
attctgctagcagccttcaaaatgaagatgtagaactctcagcatctcct
gcaccatgcctgcctggaagctgccatgttccagccttgatgataatgga
taaaaccactgaacctgttagctagccccaattaagtactgtccttataa
gagttgctttggtcatggtgtctggtcacatcagtaaaatcataactaag
agaccctatatcaaaaccaaaatatgacaaaacacatacacaaaaacttc
cctccaaagaaaaacaaaacaatataaaaatgatatgtactatgataata
aactttgtatttaaacactgttatatgtgtttttgtgctttccaaactca
ttataagtactgaatttaactgctaccatgatgtcaacagaaccataaaa
agcaggatagtataaaatgcctaaacgatattgtcagcatttttgatatt
cagaaatcctttatacctagaaacttaagataaaaataatgttcacataa
ttcctattaaggtgtaagattgtacctttgtgaggaagaaaattaatagc
tctatctccagctgtaatgcttgaattgctcttaagttttccttcaatgt
ttgaagaaacttatgcatatagggaccatgttccctgtaaaactaatatt
ttcatggagcctctcaattcattaatcttgctagtctttttcccactgct
ctcattcagaaaaactagactttacaaatattccatgtgttggatagatt
tacatcagccataaacaagctggagtcatttgaaacaaggaatctgaaat
aacctagatattcttgcccaaagaacgaataaaacaatgtgatatagttg
cacaatggagtattattgagctattaaatacaggaacatcatgaaatttt
cagcaaatgatgaaagtagaaaaagatcatcatccgtgtccagaaactaa
aaacccagaaagacaaaacatggaattttactcactataggggaatttta
tgtcttaggtaagggaggcttgcctagatccacgaaccagagacgtttat
gtaacaatctctccctataccttagaaaatagatagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38669021_38670079
seq2: B6Ng01-075B08.b_44_1103

seq1  GAATTCTCAGAAAAGACTCTAGAAATAAGTAGCAAAATTAGAAGAACAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGAAAAGACTCTAGAAATAAGTAGCAAAATTAGAAGAACAGT  50

seq1  AAGATGTGATAGTACTAAAACAGCATGGAGAAAATATGTTGCAAATCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTGATAGTACTAAAACAGCATGGAGAAAATATGTTGCAAATCTTT  100

seq1  ATATAAACAAATGAAGAAAGGTGTTAAAATTAAATAGTTCTAGGTATAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAACAAATGAAGAAAGGTGTTAAAATTAAATAGTTCTAGGTATAAC  150

seq1  CAAGATGAATATGCACTTTAAGACATTATTTCTCAACCCGTTTGCCATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGAATATGCACTTTAAGACATTATTTCTCAACCCGTTTGCCATGA  200

seq1  CCCCTTTGAGAGTTGTATATCAAACATCCTACATGTCAGATATTTTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTTGAGAGTTGTATATCAAACATCCTACATGTCAGATATTTTCATA  250

seq1  ATACCAGCAGATTTACAGTTGTCAACATATATAATTTTATATTTTGGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAGCAGATTTACAGTTGTCAACATATATAATTTTATATTTTGGGGA  300

seq1  TGCACAACATGAGGAAATTATTAAATGGTTGCAGCATTAGGAAGGATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAACATGAGGAAATTATTAAATGGTTGCAGCATTAGGAAGGATGAG  350

seq1  AACCACTGCTTTAAGATATAGAGATGGCCAGTCAGGTGGCTTATGGGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACTGCTTTAAGATATAGAGATGGCCAGTCAGGTGGCTTATGGGGTA  400

seq1  AAAATACTTGATCTCTAAACTTATGTCATGGATCCAATCCACAGAATTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTTGATCTCTAAACTTATGTCATGGATCCAATCCACAGAATTCG  450

seq1  CATACCAGACAGAGAAAATTCAAGTTGTCCTCCAAAGTCCACATGTACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCAGACAGAGAAAATTCAAGTTGTCCTCCAAAGTCCACATGTACAC  500

seq1  ATAACATATATGTTAACACACATGTCACATATACATATATGCTCACATAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACATATATGTTAACACACATGTCACATATACATATATGCTCACATAC  550

seq1  AGGCACACTGCAAATGCAGAGACAAAATAGAAAAATATATACATTAACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACACTGCAAATGCAGAGACAAAATAGAAAAATATATACATTAACCC  600

seq1  TTCTTTTGAATTGCTTTGCAAGGAATTTCTACGTTCTCATTCCCATACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGAATTGCTTTGCAAGGAATTTCTACGTTCTCATTCCCATACTC  650

seq1  AGAAACCAAAAGTGTACATTTTTGGCACATTTTAAACAAATTTTAGTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCAAAAGTGTACATTTTTGGCACATTTTAAACAAATTTTAGTAGA  700

seq1  AAATTTTCACAAAAGAAGTAGTGCATTCATAGATTGAAAAATACAATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTTCACAAAAGAAGTAGTGCATTCATAGATTGAAAAATACAATTTG  750

seq1  GTAAGAAATTTCCTTTTCAAACTAAACTATGTAATCAATACAATAACAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAATTTCCTTTTCAAACTAAACTATGTAATCAATACAATAACAAT  800

seq1  ATGAAACTTATTAGATTGCTTAATGATAATAAATACACCAAAGCACAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACTTATTAGATTGCTTAATGATAATAAATACACCAAAGCACAAGT  850

seq1  GCTGGTGACTAGCCTAGCATCCAGGTAAACTGAGGGAGGAAGTAATGGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGACTAGCCTAGCATCCAGGTAAACTGAGGGAGGAAGTAATGGAT  900

seq1  GGTATTGGT-GGTTGTGGGGGCAAAAGTTGCATTTGACGGGTCAAAATTA  949
      ||||||||| |||||| |||||||||||||||||||||||||||||| ||
seq2  GGTATTGGTGGGTTGT-GGGGCAAAAGTTGCATTTGACGGGTCAAAA-TA  948

seq1  GCTTATTTTTAGTAAGTTTTCTCTTTCTTTAACTC-TTTGCTATTCCATG  998
      ||||| ||||||||||||||||||||||||| ||| ||||||| ||||||
seq2  GCTTA-TTTTAGTAAGTTTTCTCTTTCTTTACCTCTTTTGCTA-TCCATG  996

seq1  -GCCCAAATCACTGACTTCTGGTCATTTGACTCTGGCTGTTAGCAGCAAG  1047
       |||||||||||||||||||||| |||  | |||||||||||||||||||
seq2  AGCCCAAATCACTGACTTCTGGTAATTGAATTCTGGCTGTTAGCAGCAAG  1046

seq1  GG-ATTGA-GAAAA  1059
      || ||||| |||||
seq2  GGAATTGATGAAAA  1060

seq1: chr9_38816181_38817420
seq2: B6Ng01-075B08.g_70_1308 (reverse)

seq1  AGTCTATTCTA-TTTCTCATGTATA--GTGAGATTGTTAC-TTAACTTCT  46
      |||||| |||| ||||| | |||||  | ||||||||||| | ||| |||
seq2  AGTCTA-TCTATTTTCTAAGGTATAGGGAGAGATTGTTACATAAACGTCT  49

seq1  CTGGTCTGTGGATTCTA-GCAAGGCTTTCCTTTACTTTAAGAC-TAATAT  94
      |||||  ||||| |||| ||||| |  ||| ||||  |||||| ||| ||
seq2  CTGGTTCGTGGA-TCTAGGCAAGCC--TCCCTTAC-CTAAGACATAAAAT  95

seq1  CCACTTATAAGTGAGT-ACATTCCATG-TTTGTCTTTCTGGGTTTGTAGT  142
       | | ||| ||||||| | |||||||| ||||||||||||||||| ||||
seq2  TCCCCTAT-AGTGAGTAAAATTCCATGTTTTGTCTTTCTGGGTTTTTAGT  144

seq1  ATCT-GACACTGGATGATGATC-TTTTCTACTTTCATCATTTGCCTGAAA  190
       ||| ||||| ||||||||||| |||||||||||||||||||| ||||||
seq2  TTCTGGACAC-GGATGATGATCTTTTTCTACTTTCATCATTTG-CTGAAA  192

seq1  ATTTCATGATGTTCTTGTATTTAATAGCTCAATAATACTCCATTGTGCAA  240
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTTCATGATGTTCCTGTATTTAATAGCTCAATAATACTCCATTGTGCAA  242

seq1  CTATATCACATTTGTTTTATTCGTTCTTTGGGCAAGGAATATCTAGGTTA  290
      |||||||||| |||||||||||||||||||||||| ||||||||||||||
seq2  CTATATCACA-TTGTTTTATTCGTTCTTTGGGCAA-GAATATCTAGGTTA  290

seq1  TTTCAGATTCCCTGTTTTCAAATGACTCCAGCTTGTTTATGGCTGATGTA  340
      ||||||||||| || |||||||||||||||||||||||||||||||||||
seq2  TTTCAGATTCCTTG-TTTCAAATGACTCCAGCTTGTTTATGGCTGATGTA  339

seq1  AATCTATCCAACACATGGAATATTTGTAAAGTCTAGTTTTTCTGAATGAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATCCAACACATGGAATATTTGTAAAGTCTAGTTTTTCTGAATGAG  389

seq1  AGCAGTGGGAAAAAGACTAGCAAGATTAATGAATTGAGAGGCTCCATGAA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGGGAAAAAGACTAGCAAGATTAATGAATTGAGAGGCTCCATGAA  439

seq1  AATATTAGTTTTACAGGGAACATGGTCCCTATATGCATAAGTTTCTTCAA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAGTTTTACAGGGAACATGGTCCCTATATGCATAAGTTTCTTCAA  489

seq1  ACATTGAAGGAAAACTTAAGAGCAATTCAAGCATTACAGCTGGAGATAGA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAAGGAAAACTTAAGAGCAATTCAAGCATTACAGCTGGAGATAGA  539

seq1  GCTATTAATTTTCTTCCTCACAAAGGTACAATCTTACACCTTAATAGGAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTAATTTTCTTCCTCACAAAGGTACAATCTTACACCTTAATAGGAA  589

seq1  TTATGTGAACATTATTTTTATCTTAAGTTTCTAGGTATAAAGGATTTCTG  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGAACATTATTTTTATCTTAAGTTTCTAGGTATAAAGGATTTCTG  639

seq1  AATATCAAAAATGCTGACAATATCGTTTAGGCATTTTATACTATCCTGCT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAAAAATGCTGACAATATCGTTTAGGCATTTTATACTATCCTGCT  689

seq1  TTTTATGGTTCTGTTGACATCATGGTAGCAGTTAAATTCAGTACTTATAA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGGTTCTGTTGACATCATGGTAGCAGTTAAATTCAGTACTTATAA  739

seq1  TGAGTTTGGAAAGCACAAAAACACATATAACAGTGTTTAAATACAAAGTT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGGAAAGCACAAAAACACATATAACAGTGTTTAAATACAAAGTT  789

seq1  TATTATCATAGTACATATCATTTTTATATTGTTTTGTTTTTCTTTGGAGG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCATAGTACATATCATTTTTATATTGTTTTGTTTTTCTTTGGAGG  839

seq1  GAAGTTTTTGTGTATGTGTTTTGTCATATTTTGGTTTTGATATAGGGTCT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTTTTGTGTATGTGTTTTGTCATATTTTGGTTTTGATATAGGGTCT  889

seq1  CTTAGTTATGATTTTACTGATGTGACCAGACACCATGACCAAAGCAACTC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTATGATTTTACTGATGTGACCAGACACCATGACCAAAGCAACTC  939

seq1  TTATAAGGACAGTACTTAATTGGGGCTAGCTAACAGGTTCAGTGGTTTTA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGGACAGTACTTAATTGGGGCTAGCTAACAGGTTCAGTGGTTTTA  989

seq1  TCCATTATCATCAAGGCTGGAACATGGCAGCTTCCAGGCAGGCATGGTGC  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTATCATCAAGGCTGGAACATGGCAGCTTCCAGGCAGGCATGGTGC  1039

seq1  AGGAGATGCTGAGAGTTCTACATCTTCATTTTGAAGGCTGCTAGCAGAAT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATGCTGAGAGTTCTACATCTTCATTTTGAAGGCTGCTAGCAGAAT  1089

seq1  ACTCTTTTCCAAGCAGCTAGGATGAGGGTCTTAAAGACCTCACTCACAGT  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTTCCAAGCAGCTAGGATGAGGGTCTTAAAGACCTCACTCACAGT  1139

seq1  GACACTTCTCCAAAAAGGACACACCTACTTCAACAGGGTTACACCTTCTA  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTCTCCAAAAAGGACACACCTACTTCAACAGGGTTACACCTTCTA  1189

seq1  ATTCTGCCATTCCCTGGGCAGAACATATAAGAACCATCACAGAGGAATTC  1240
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCCATTCCCTGGGCAGAACATATAAGAACCATCACAGAGGAATTC  1239