BAC Information

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BAC

Clone NameB6Ng01-075F16
Chromosome9 (Build37)
Map Location 22,023,366 - 22,024,501
singlet/doubletsinglet
Overlap genenone
Upstream geneKeap1, Edg8, Atg4d, BC021438, Cdkn2d, Ap1m2, Slc44a2, Ilf3, Qtrt1, Dnm2, Tmed1, AB124611, Carm1, Yipf2, 1810026J23Rik, EG666043, Smarca4, Ldlr, Spc24, Ankrd25, Dock6, EG624219, Rab3d, BC010787, 2510048L02Rik, BC018242, 2310047B19Rik, Epor, Rgl3, C330001K17Rik, Prkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik
Downstream geneZfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, Bbs9, LOC100040805
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075F16.bB6Ng01-075F16.g
ACCDH891937DH891938
length1,1321,232
definitionDH891937|Mus musculus domesticus DNA, BAC clone: B6Ng01-075F16, 5' end.DH891938|Mus musculus domesticus DNA, BAC clone: B6Ng01-075F16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacctccgtgaatgttggttacacacaataactaattgttatttg
ttgtgtgtaaccctaagtgttaaatcatcatttccagttcttcagtggct
gccgagtgcaggctgggtacagtgggggctgggataccatacataatttg
aagggagtttagtcccatctgctaaggagaattccttaccagatataggg
caaaggaaaggagaatcagccagtccctgccagtttctaaggctaatata
gttaaggtctcttttaatgttctattcatcctttttgacttgtactgaac
ttgggggtcagtatgcacaatgcaatttgcaatctgcctcaataaacttc
acgacaccctgacttaccttggacacaaatgtcagtgcactgtctgaccc
tatcatatgaagaaatccattcctgggtaagatgttctccagcaattcct
tagccactacctctgctgtttcaaccttagttgggaatgcctctgtccac
ctggagaaagtgtccacaaataccagcaggtacttatagtaaacaaatac
tcaagtgccagttgctgcaccatccagctttttctaaaaaatgtcatttc
ttttatgtgtacgcgtgtttgcctgcatgtatgtgtaccaggttgtactg
gtgtccttggggcatcaagtccctggaactggagttatggttgtgagctt
ccatgtgggtgctaggaatcaaactggggtcctctggaaaagcagccagt
gttcttaatcaatgagctagttccctggctcctgcactgctgtcttcttg
aaggaggtcttgtcccgaccgagagtctggaaggattcttagtctaaaga
attgctttggctttgttactgcatgaaccacctttatagctgtcatgatt
tgcagcaaaaggtcacctatgtttctgggggcttatggaaccatgtgctt
tatggacagaaaatttccagatagccaagttctcacagccactgacactt
actgggacttaggttcaggggatgacatgggtgtgtcccactgcctcaca
atagtgctacaagctggtgactaagcacagccttgattagacatttcaga
ggcactgcagcgagaatcgatgaaaaaacaca
gaattcagcacaacaacacaccattggcttattcaaacatcagcagaaag
attacatgtcagcaaaagaatacgtgcaggtcagggtgtcagggttctgt
gagttgttgactcagctcagatggccctgttatgtcctcacattcctctt
tatctttatggtcaagctgttcccaggaatgcccaggtttgtttttcttt
gttctcagccccaggcagcctctaggctcacaaacaaccagcaatttatg
agtattttatatgacttacaggtcttgaaatttcatctttctttcacctt
cgggggtctttcagttaagcgtgctcactgttcctaaataggattcaagt
tcagttcctagcacccatgtggtggctcacaaccatctgtaactccagtg
tcagaggctctgatgccttatttttgcttccatggataccatacaaacat
ctggtgcacagacaaatatggaggaaaaacacacccataagattacagta
atgcaactaaaaccagaggatcgccacaaatttgaagccagctgaggctg
tagtgtgagatcctgtcttgttattaacgcgttctcacgcccggccagga
agaacacagcaaaccagaatcttctgcggcaaaactttattgcttacatc
ttcaggagcaagagtgtaagaagcaagagagagagaaaacgaaaccccgt
ccctattaaggagaattatccttcgcctaggacgtgtcactccctgattg
gctgcagcccatcggccgagttgacgtcatggggaaggcagagcacatgg
agtggagaaccaccctcggcacatgcgcagattatttgtttaccacttag
aacacagctgtcagcgccatcttgtaacggcgaatgtgggcgcggctccc
aacatctcccccttttcttttataagagcaaataggccacccatattaat
gagagtggagatagaggtcaaatccccagtgtgcagtaaaggagcgtaca
cataactctttcaggctcatcacctagagggtctggtctggtcccgtgtt
tgtttttctgggggagacacttgacactcaacctttctgaaagatgacag
gtcttcctgaatagctcattggtgctgcagagtccttcatctcaaggctt
aggcgtcaactcttcgagctggctgagccacctacctgatgatcccgtgg
ccgatggaggggctaaagaacgaatgggcgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22023366_22024501
seq2: B6Ng01-075F16.b_48_1179 (reverse)

seq1  TGTGTTTTTCCATCGTATCTCTGCTGCAGTTGCCTCTGAAATGTCTAATC  50
      ||||||||| |||||  |||| ||||||| ||||||||||||||||||||
seq2  TGTGTTTTTTCATCGATTCTC-GCTGCAG-TGCCTCTGAAATGTCTAATC  48

seq1  AAGGCCTGTGGCTTAGTCACCAGCTTGTAGCACTATTGTGAGGCAGTGGG  100
      |||| |||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAGG-CTGT-GCTTAGTCACCAGCTTGTAGCACTATTGTGAGGCAGTGGG  96

seq1  ACACACCCATGTCATCCCCTGAACCTAAGTCCCAGTAAGTGTCAGTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCCATGTCATCCCCTGAACCTAAGTCCCAGTAAGTGTCAGTGGCT  146

seq1  GTGAGAACTTGGCTATCTGGAAATTTTCTGTCCATAAAGCACATGGTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAACTTGGCTATCTGGAAATTTTCTGTCCATAAAGCACATGGTTCC  196

seq1  ATAAGCCCCCAGAAACATAGGTGACCTTTTGCTGCAAATCATGACAGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCCCCAGAAACATAGGTGACCTTTTGCTGCAAATCATGACAGCTA  246

seq1  TAAAGGTGGTTCATGCAGTAACAAAGCCAAAGCAATTCTTTAGACTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGTGGTTCATGCAGTAACAAAGCCAAAGCAATTCTTTAGACTAAGA  296

seq1  ATCCTTCCAGACTCTCGGTCGGGACAAGACCTCCTTCAAGAAGACAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCCAGACTCTCGGTCGGGACAAGACCTCCTTCAAGAAGACAGCAG  346

seq1  TGCAGGAGCCAGGGAACTAGCTCATTGATTAAGAACACTGGCTGCTTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGAGCCAGGGAACTAGCTCATTGATTAAGAACACTGGCTGCTTTTC  396

seq1  CAGAGGACCCCAGTTTGATTCCTAGCACCCACATGGAAGCTCACAACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGACCCCAGTTTGATTCCTAGCACCCACATGGAAGCTCACAACCAT  446

seq1  AACTCCAGTTCCAGGGACTTGATGCCCCAAGGACACCAGTACAACCTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCAGTTCCAGGGACTTGATGCCCCAAGGACACCAGTACAACCTGGT  496

seq1  ACACATACATGCAGGCAAACACGCGTACACATAAAAGAAATGACATTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACATGCAGGCAAACACGCGTACACATAAAAGAAATGACATTTTT  546

seq1  TAGAAAAAGCTGGATGGTGCAGCAACTGGCACTTGAGTATTTGTTTACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAAGCTGGATGGTGCAGCAACTGGCACTTGAGTATTTGTTTACTA  596

seq1  TAAGTACCTGCTGGTATTTGTGGACACTTTCTCCAGGTGGACAGAGGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTACCTGCTGGTATTTGTGGACACTTTCTCCAGGTGGACAGAGGCAT  646

seq1  TCCCAACTAAGGTTGAAACAGCAGAGGTAGTGGCTAAGGAATTGCTGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACTAAGGTTGAAACAGCAGAGGTAGTGGCTAAGGAATTGCTGGAG  696

seq1  AACATCTTACCCAGGAATGGATTTCTTCATATGATAGGGTCAGACAGTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTTACCCAGGAATGGATTTCTTCATATGATAGGGTCAGACAGTGC  746

seq1  ACTGACATTTGTGTCCAAGGTAAGTCAGGGTGTCGTGAAGTTTATTGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACATTTGTGTCCAAGGTAAGTCAGGGTGTCGTGAAGTTTATTGAGG  796

seq1  CAGATTGCAAATTGCATTGTGCATACTGACCCCCAAGTTCAGTACAAGTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTGCAAATTGCATTGTGCATACTGACCCCCAAGTTCAGTACAAGTC  846

seq1  AAAAAGGATGAATAGAACATTAAAAGAGACCTTAACTATATTAGCCTTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGATGAATAGAACATTAAAAGAGACCTTAACTATATTAGCCTTAG  896

seq1  AAACTGGCAGGGACTGGCTGATTCTCCTTTCCTTTGCCCTATATCTGGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGCAGGGACTGGCTGATTCTCCTTTCCTTTGCCCTATATCTGGTA  946

seq1  AGGAATTCTCCTTAGCAGATGGGACTAAACTCCCTTCAAATTATGTATGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTCTCCTTAGCAGATGGGACTAAACTCCCTTCAAATTATGTATGG  996

seq1  TATCCCAGCCCCCACTGTACCCAGCCTGCACTCGGCAGCCACTGAAGAAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCAGCCCCCACTGTACCCAGCCTGCACTCGGCAGCCACTGAAGAAC  1046

seq1  TGGAAATGATGATTTAACACTTAGGGTTACACACAACAAATAACAATTAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATGATGATTTAACACTTAGGGTTACACACAACAAATAACAATTAG  1096

seq1  TTATTGTGTGTAACCAACATTCACGGAGGTGAATTC  1136
      ||||||||||||||||||||||||||||||||||||
seq2  TTATTGTGTGTAACCAACATTCACGGAGGTGAATTC  1132