BAC Information

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BAC

Clone NameB6Ng01-087A01
Chromosome9 (Build37)
Map Location 33,734,073 - 33,734,711
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042343
Downstream geneKirrel3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087A01.bB6Ng01-087A01.g
ACCDH900252DH900253
length1,0281,179
definitionDH900252|Mus musculus domesticus DNA, BAC clone: B6Ng01-087A01, 5' end.DH900253|Mus musculus domesticus DNA, BAC clone: B6Ng01-087A01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttgccctatcactcaatagtgaggatgcccagagtggaggag
acaatgaagacaggatggacaatctggaaaggcctgcttcatgaagacca
gacacagataccttcatggtcaacactgagcgtgcagtttacaaaatgtt
caacatccttaatcattagggaaatgcaaatcaaaacaaccctgagattc
cacctcacaccagtcagaatggctaatatcaaaaattcaggtgacagcag
atgctgacgaggatgtggagaaagaggaacatgcctccattgttggtggg
attgtaagtttgtacaaccactctggaaatcagatggttcctcagaaaat
tggacatagtactaccggaggatcctgcagtacctctcctgggcatatat
ccagaagatattccaaccagtaagaaggacacatgctccactatgttcat
agcagccttatttataatagccagaagctggaaagaacccagatgcccct
caacagaggaatggatacagaaaatgtggtacatttacacaatggagtac
taataagctattaaaaagaatgaatttatgaaattactaggcaaatggat
ggacctggagggcatcatcctgaatgaggtaacccaatcacaaaggaact
cacacaatatgtactcactgataagtggatattagcccagaaacttagaa
tacccaagatataaaatacaatttgctaaacacatgaaactcaagaagaa
tgaagaacaaagtgtggacactttgccccttcttagaaatgggaacaaaa
cacccatggaaggagttacagagacaaagtttggagctgagatgaaagga
tggaccatctagagactgccatatctggggatccatcccataatcggccc
ccaaacactgacaccattgcatacactagcaagattttgctgaaaggacc
cagatatagctgtcacttgtgagactatgcttgggcctagcaaacacaga
agtggatgctcacagtcagctatggatg
gaattctctgtttatttctgtatccaatttttaagttgtattatttttgg
ttgttgatgtattatttcttgacttctatatattttggatattaatcttc
tattggatatggaactgttgaaaatcttttccaattctgtaggctgctgt
tttgttttattaacagtcctttgccatttagaagcttttcactttcaaga
gattccatttattaattgctgatcttagtgcctgtgttattagtgttctg
ttcaggaagttgccttgtgtgccaatgggttcaaggctattcaaaatttt
ctcttgtatttgattcagtttatcttgttttatgctgagattttttgatc
cacttggacttgagttttgtgcagggtgataactatggatctatttgagt
tcttctacatgcaaacatctaatatgagcactatcatttttttaaagatg
ctttcctttttctattgtgtcttcctggcattgttagccaaaatcagctg
ttcataggtgcatatctggtttttcaatttgattccatgccaatggcatg
tggtttttattactgtagctctatagtacaacttgaaataaaggatggta
agacatctggaatttcttttactgtttaggattgttttagctatcatgtt
tttttttccattatgtagttgagtattttcatttacaggtccgtaaaact
ttttattgggatttttgaaggggatggtgttgaatctgtagattgctttt
ggtaggatggttatttttactatgttgatcttaacatgaatccttgtttt
attgtataagcttttcactggcttggttagagtcaccacaacatattttc
tattatttttggctactctttttcaatttatcatttgtttatagaagtgc
tactgaatttttttttttttagtaaaattgtattcagcacttcactgaag
ttgttttttctgcttgtaggagcctcctggtagattttcatggtaacatt
tgttatactttattattattttgcaggagcaatcttgatttttttgatag
tcttgatctcattcagttgtcttattctctaactaaggcttcaagtacaa
attcaattgtatggcagaagtagccagttttatctggtcctggtttacgg
aattcttttgaatttttttttttccatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_33734073_33734711
seq2: B6Ng01-087A01.b_46_684

seq1  GAATTCTCTTGCCCTATCACTCAATAGTGAGGATGCCCAGAGTGGAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTGCCCTATCACTCAATAGTGAGGATGCCCAGAGTGGAGGAG  50

seq1  ACAATGAAGACAGGATGGACAATCTGGAAAGGCCTGCTTCATGAAGACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGAAGACAGGATGGACAATCTGGAAAGGCCTGCTTCATGAAGACCA  100

seq1  GACACAGATACCTTCATGGTCAACACTGAGCGTGCAGTTTACAAAATGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGATACCTTCATGGTCAACACTGAGCGTGCAGTTTACAAAATGTT  150

seq1  CAACATCCTTAATCATTAGGGAAATGCAAATCAAAACAACCCTGAGATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCCTTAATCATTAGGGAAATGCAAATCAAAACAACCCTGAGATTC  200

seq1  CACCTCACACCAGTCAGAATGGCTAATATCAAAAATTCAGGTGACAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCACACCAGTCAGAATGGCTAATATCAAAAATTCAGGTGACAGCAG  250

seq1  ATGCTGACGAGGATGTGGAGAAAGAGGAACATGCCTCCATTGTTGGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGACGAGGATGTGGAGAAAGAGGAACATGCCTCCATTGTTGGTGGG  300

seq1  ATTGTAAGTTTGTACAACCACTCTGGAAATCAGATGGTTCCTCAGAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAGTTTGTACAACCACTCTGGAAATCAGATGGTTCCTCAGAAAAT  350

seq1  TGGACATAGTACTACCGGAGGATCCTGCAGTACCTCTCCTGGGCATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATAGTACTACCGGAGGATCCTGCAGTACCTCTCCTGGGCATATAT  400

seq1  CCAGAAGATATTCCAACCAGTAAGAAGGACACATGCTCCACTATGTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAGATATTCCAACCAGTAAGAAGGACACATGCTCCACTATGTTCAT  450

seq1  AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCT  500

seq1  CAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTAC  550

seq1  TAATAAGCTATTAAAAAGAATGAATTTATGAAATTACTAGGCAAATGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAGCTATTAAAAAGAATGAATTTATGAAATTACTAGGCAAATGGAT  600

seq1  GGACCTGGAGGGCATCATCCTGAATGAGGTAACCCAATC  639
      |||||||||||||||||||||||||||||||||||||||
seq2  GGACCTGGAGGGCATCATCCTGAATGAGGTAACCCAATC  639