BAC Information

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BAC

Clone NameB6Ng01-089B05
Chromosome9 (Build37)
Map Location 93,613,513 - 93,614,673
singlet/doubletsinglet
Overlap geneLOC674371
Upstream geneLOC100039944, LOC667009, LOC100040114
Downstream geneLOC384967, EG384968, 1190002N15Rik, EG667601, Slc9a9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089B05.bB6Ng01-089B05.g
ACCDH901753DH901754
length1,1451,099
definitionDH901753|Mus musculus domesticus DNA, BAC clone: B6Ng01-089B05, 5' end.DH901754|Mus musculus domesticus DNA, BAC clone: B6Ng01-089B05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctagacatgtttcatcatatataacttataattgctcccatact
ctgccaccttcatccatatttagatggttctcttcttccaccataaaaga
gaaagcatcaaatatgctatctttgtcgcacacacttttatatctgttgt
ttcccaactctactgcttccttcagacttctgttttctccacaaatcagc
gcgcgcgcacacacacacacagacacacacacacacacacgctttctcaa
tatgggagaaaccatgtaaacttcaatccattttcttacaaatggcaaaa
ctcgatactgaataaacctcaagtcatttgtctcagttcttcagctgatg
gacttataggctggttgtatagcaattcccgtacctgccagcatccctgt
tgggtgctggtgtagattccatgttggtccactaaagaagattggagatg
agtcagataacctttctatttctatgtttaggaatctacacagacttcca
taatggccacatcagtttacagtacaacttgagatatatacaggaagcta
ctctttcttacatacttgtcaacttctgtttaatttattttcttgacaac
aaccattctgattggggttaaaattaaatcctaatgcagcttcaatttct
actttgctgatgactaagatgctgagatttttttcagacattatttgcta
ttatcattcttctgagaactgactgataaattcatttggcaacatactag
ctaaaatgtgtgatttagccacttttatttctacaattcttatttattta
tttgagaaatagacattaaacaaagtacagaaaatatctttaatggattc
tctaaatcattaataataacacaataaatgcaataacctgtcttttccat
gaattgaaagaattatgatctaaatagctaaattatgaaggtacttgcag
attttagcaattcctattaaatctaatggctttcttcagaaatgaatgtc
tatgtcgaggcacaaagtcctgtaatatcaaagcaattctaagcagagaa
gaacatggtagaagattctaaactgtgatcttacttataatacagagcca
tagcaacatttaaaaattttatttatagtttaaaccaatacctat
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
acaaacgctttctcagcatctaaggagatgatcatgtggtttttgtcttt
gagtttgtttatatactggattacattgatggatttccatatattaaatc
atccttgcatccctggaatgaaacttcctcggtcaggatggatgattgtt
ttgatgtgttcttggattcggttagcaaaaattttattgattatttttgc
attgatattcataagagaaattggtctgaagttctctatctttattgggt
ctttctgtgctttaagtatcagagtaattgtgacttcatagaatgacttg
ggttgagtaccttctgcttctgttttgtggaatagtttgtgaagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaaccaatctg
gtcctgggctttgtttggttgggagactgttaatgactgcttctatgtct
ttaggggatatagaactgtttagatcattaaactcatcctgatttaactt
tgctacctggtatctgtctagaaatttgtccatttcatccaggttctcca
gttttgttgactatagccagaaggatctgtagaaggatatgtagtaggat
ctgatgttgttttggatttctttaggatctgttgttatgtctccctttta
tttcctgatttttgttaattaggatgctgtccccctgtcctttagtgagt
ctggctaagggtttatctatcttgttcattttatcaagaacccagctcct
cctttggttgattctttgaatagttcttcttgttccacttggttgatttc
cccctgagttgattatttcctgctgtctactcctcttgggtgaatttgct
tccttttgttctagagatttatgtgggtttcagctgctagtgtgtgctct
ctctagtttcttttggaggcactcgaagcttgagtttcctctaggaaatg
ctttcatgtgtcatgagatttgggtattgtgtggcttattttcataaaac
caaaaggcctaaatgcttttttttctctttctaccgacaatataaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_93613513_93614673
seq2: B6Ng01-089B05.b_50_1194

seq1  GAATTCCTAGACATGTTTCATCATATATAACTTATAATTGCTCCCATACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTAGACATGTTTCATCATATATAACTTATAATTGCTCCCATACT  50

seq1  CTGCCACCTTCATCCATATTTAGATGGTTCTCTTCTTCCACCATAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACCTTCATCCATATTTAGATGGTTCTCTTCTTCCACCATAAAAGA  100

seq1  GAAAGCATCAAATATGCTATCTTTGTCGCACACACTTTTATATCTGTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCATCAAATATGCTATCTTTGTCGCACACACTTTTATATCTGTTGT  150

seq1  TTCCCAACTCTACTGCTTCCTTCAGACTTCTGTTTTCTCCACAAATCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAACTCTACTGCTTCCTTCAGACTTCTGTTTTCTCCACAAATCAGC  200

seq1  GCGCGCGCACACACACACACAGACACACACACACACACACGCTTTCTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCGCGCACACACACACACAGACACACACACACACACACGCTTTCTCAA  250

seq1  TATGGGAGAAACCATGTAAACTTCAATCCATTTTCTTACAAATGGCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGAGAAACCATGTAAACTTCAATCCATTTTCTTACAAATGGCAAAA  300

seq1  CTCGATACTGAATAAACCTCAAGTCATTTGTCTCAGTTCTTCAGCTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGATACTGAATAAACCTCAAGTCATTTGTCTCAGTTCTTCAGCTGATG  350

seq1  GACTTATAGGCTGGTTGTATAGCAATTCCCGTACCTGCCAGCATCCCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTATAGGCTGGTTGTATAGCAATTCCCGTACCTGCCAGCATCCCTGT  400

seq1  TGGGTGCTGGTGTAGATTCCATGTTGGTCCACTAAAGAAGATTGGAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGCTGGTGTAGATTCCATGTTGGTCCACTAAAGAAGATTGGAGATG  450

seq1  AGTCAGATAACCTTTCTATTTCTATGTTTAGGAATCTACACAGACTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGATAACCTTTCTATTTCTATGTTTAGGAATCTACACAGACTTCCA  500

seq1  TAATGGCCACATCAGTTTACAGTACAACTTGAGATATATACAGGAAGCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCCACATCAGTTTACAGTACAACTTGAGATATATACAGGAAGCTA  550

seq1  CTCTTTCTTACATACTTGTCAACTTCTGTTTAATTTATTTTCTTGACAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCTTACATACTTGTCAACTTCTGTTTAATTTATTTTCTTGACAAC  600

seq1  AACCATTCTGATTGGGGTTAAAATTAAATCCTAATGCAGCTTCAATTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTCTGATTGGGGTTAAAATTAAATCCTAATGCAGCTTCAATTTCT  650

seq1  ACTTTGCTGATGACTAAGATGCTGAGATTTTTTTCAGACATTATTTGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGCTGATGACTAAGATGCTGAGATTTTTTTCAGACATTATTTGCTA  700

seq1  TTATCATTCTTCTGAGAACTGACTGATAAATTCATTTGGCAACATACTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATTCTTCTGAGAACTGACTGATAAATTCATTTGGCAACATACTAG  750

seq1  CTAAAATGTGTGATTTAGCCACTTTTATTTCTACAATTCTTATTTATTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATGTGTGATTTAGCCACTTTTATTTCTACAATTCTTATTTATTTA  800

seq1  TTTGAGAAATAGACATTAAACAAAGTACAGAAAATATCTTTAATGGATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGAAATAGACATTAAACAAAGTACAGAAAATATCTTTAATGGATTC  850

seq1  TCTAAATCATTAATAATAACACAATAAATGCAATAACCTGTCTTTTCCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATCATTAATAATAACACAATAAATGCAATAACCTGTCTTTTCCAT  900

seq1  GAATTGAAAGAATTATGATCTAAATAGCTAAATTATGAAAGGTAACTTGC  950
      ||||||||||||||||||||||||||||||||||||| ||||| ||||||
seq2  GAATTGAAAGAATTATGATCTAAATAGCTAAATTATG-AAGGT-ACTTGC  948

seq1  AGATTTTAGACAATTCCTATTAAAATCTTAATGGCTTTCTTCAGATAATG  1000
      ||||||||| ||||||||||| ||||| ||||||||||||||||| ||||
seq2  AGATTTTAG-CAATTCCTATT-AAATC-TAATGGCTTTCTTCAGA-AATG  994

seq1  AATGTCTATGTCGAGGCACAAAAGTCCTGTAATAATCAAAGCAATTCTAA  1050
      ||||||||||||||||||| ||||||||||||| ||||||||||||||||
seq2  AATGTCTATGTCGAGGCAC-AAAGTCCTGTAAT-ATCAAAGCAATTCTAA  1042

seq1  GCAGAG-AGAACAATGGTAG-AGATATCATAACTGGTGATCTTATCTTAT  1098
      |||||| ||||| ||||||| |||| ||  |||| ||||||||| |||||
seq2  GCAGAGAAGAAC-ATGGTAGAAGAT-TCTAAACT-GTGATCTTA-CTTAT  1088

seq1  AATACAGAGCCATAGCAACATTTTAATAATTTTATTATATAGTTTTATAA  1148
      |||||||||||||||||||| ||||| ||||||||| |||||||   |||
seq2  AATACAGAGCCATAGCAACA-TTTAAAAATTTTATT-TATAGTT---TAA  1133

seq1  ACCATATACCTAT  1161
      |||| ||||||||
seq2  ACCA-ATACCTAT  1145