BAC Information

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BAC

Clone NameB6Ng01-091G20
Chromosome9 (Build37)
Map Location 122,473,616 - 122,474,655
singlet/doubletsinglet
Overlap genenone
Upstream geneLyzl4, Vipr1, LOC100040063, Sec22c, Deb1, Nktr, Kbtbd5, Hhatl, Ccdc13, Higd1a, Ccbp2, Cyp8b1, C730027P07Rik, C85492, LOC100040121, Snrk, Tmem16k, Abhd5, LOC100040193, LOC100040204
Downstream gene9530059O14Rik, LOC666218, LOC671232, D9Ertd402e, Zfp445, LOC623874, Zfp167, EG666257, Zfp660, Zfp105, 1110059G10Rik, Kif15, Tmem42, Tgm4, Zdhhc3, Exosc7, Clec3b, Cdcp1, Tmem158, Scp2-ps2, Lars2, Limd1, Sacm1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091G20.bB6Ng01-091G20.g
ACCDH903456DH903457
length1,0801,198
definitionDH903456|Mus musculus domesticus DNA, BAC clone: B6Ng01-091G20, 5' end.DH903457|Mus musculus domesticus DNA, BAC clone: B6Ng01-091G20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttctaaaatcatttggccgtggacattttttaaatggctgca
aatttaatttcccttaatgtttataaggagtagatgatacagttagtgtt
ggctgagtgttagtttttagtttgaggaaaattaaattactttctaaatt
ttaaactttcttctggtgctggagagatggctcagtagttaagaacactt
gttgctctttcagaggaccagggttcagtttccagcatccatgtgaaggc
tggcaacctcctgcaacttcagttctaggacatccaatgctctggcctcc
ttgggcacttggactctcatggacatacccaatcacagacatataattta
aaataataaaaataaattcttaaaaatggaaactgcaatttcttttaatg
aatggagcgtgtagttcagagtagcattgcttgtgtgctaatacttgtgt
gctaatgcttgtgtgttaacacttgtgtgttaacacttgtgtgttaatgt
ttgtgagttaataatgcttgtgtgttaatgtttgtgtgctaatgctcgtg
tgctaatgcttgtgtgctaatgtttgtgttaatgcttgtgtgttgatgct
tgtgtgttattggtagcaggaaggcaacaatgtcactaggctcatttctg
atattgatggcttgtgtttctcatcttagttttttgttagttttgctaga
gatgtatcagtctcattgatttcactaaagaacgagcttttcatttcaca
cttttctgttgtgttagttccaatttagcctttttatgaatgtctgtgca
cttgtgtgggggtgggtgcatgtgcacatgtatgcttgtgcatgtggagg
tcatagaaacaatgtcagatgtcatctttcagaatgccatctacgtcctt
tgagacaggatagctcagtgaccaagtagcctgtttagccagtgagctca
gaatgctgcagtctttactgcccagagctgggattacagcatgtttcttc
atgccccgatacagagctggccttacaccctgtatcatcatctagcacat
atgtgaattctgagatggaaccttagggtc
gaattccccttaaagaaatagcccctctggctatctatcccttgcttcag
ggaagatgagtggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgtgttttgtgtttggcacatgtgttaggtgcagagtgcggcccgcac
tttcgccatggtagcgtaggcttttgctgcagtggaggcgggacaatctc
ctcagattcggtttgccgctctaaaagaaattatgctgcgttatgccgtg
gggtgcgaggctaagcactgcacagaggatagcttgctgttggcatcctg
tggaaggcacatctgattgcatgaaggttcagtgtcctagttcccttccc
ccaggaaaaacgacacgggagctggccaagacctctctgggtgatgagcc
taagggatggttttgtgtagggcccctatgcttgcacactggggatcaga
cctctaccttcacccatgaggcttgcttgcagcaattaagatctggccat
aggttaattaacatcctggccctttgatgcacctgccgcaagcaaaacac
aatctccccaggtgtggcttggcatgattgagaggtagtcagtgataaga
ctccctgggcatgtcaccaacctaagacagggatcaaaccaatgctgttt
gtcacccaaggacgggtaagggcatgactacggggggctatctacagaca
ttctctctgccaaaaaagaaaaaagggggaattgtggggagcgggtgtgg
cggcagtcccaaaggcgccagggactgcagctaagtcatatgacttgcac
ctgacttcctcatataagacacaaacatcttgagtgctgcgcagtgtacc
aggatacaggtgaatcccatttggtggagatttgcccctgctgccctgat
tagctgaagcctcgtgactggcgagggggcgtggcctgcgttcgtggatg
agagagagattaaaaggagtgagaggcccaggttcggggagatataacag
gggagattaaacaaaggagatattaaccaggaattaaacaggaatataaa
cagtgaaataccaggaattaccagagacatgactgataacgtgtgcagaa
gattctgtacacgtcttctcttgacatgaagtgctaacgtggtcctaaac
cagacagaactcttagcatgacgagaaatctgcctatgagggagacct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_122473616_122474655
seq2: B6Ng01-091G20.b_95_1125 (reverse)

seq1  GACCCTAAAGATTCCATCTTCAGAATTCACATAATGTGCTGAGCATGATG  50
      |||||| ||| ||||||| ||||||||||||| ||||||| || ||||||
seq2  GACCCT-AAGGTTCCATC-TCAGAATTCACAT-ATGTGCT-AG-ATGATG  45

seq1  ATACAGGGTGTTAAGCCCAGCTCTGGTATACGGGGCATGAAGAAACATGC  100
      |||||||||| |||| |||||||| |||| ||||||||||||||||||||
seq2  ATACAGGGTG-TAAGGCCAGCTCT-GTAT-CGGGGCATGAAGAAACATGC  92

seq1  TGTAATCCCAGCTCTGGGGCAGTAAAGACTGCAGCATTCTGGAGCTCACT  150
      ||||||||||||||| |||||||||||||||||||||||| |||||||||
seq2  TGTAATCCCAGCTCT-GGGCAGTAAAGACTGCAGCATTCT-GAGCTCACT  140

seq1  GGCTAAACAGGCTACTTGGTCACTGAGCTATCCTGTCTCAAAGGACGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAACAGGCTACTTGGTCACTGAGCTATCCTGTCTCAAAGGACGTAG  190

seq1  ATGGCATTCTGAAAGATGACATCTGACATTG-TTCTATGACCTCCACATG  249
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGGCATTCTGAAAGATGACATCTGACATTGTTTCTATGACCTCCACATG  240

seq1  CACAAGCATACATGTGCACATGCACCCACCCCCACACAAGTGCACAGACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCATACATGTGCACATGCACCCACCCCCACACAAGTGCACAGACA  290

seq1  TTCATAAAAAGGCTAAATTGGAACTAACACAACAGAAAAGTGTGAAATGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAAAAAGGCTAAATTGGAACTAACACAACAGAAAAGTGTGAAATGA  340

seq1  AAAGCTCGTTCTTTAGTGAAATCAATGAGACTGATACATCTCTAGCAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCGTTCTTTAGTGAAATCAATGAGACTGATACATCTCTAGCAAAA  390

seq1  CTAACAAAAAACTAAGATGAGAAACACAAGCCATCAATATCAGAAATGAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAAAAACTAAGATGAGAAACACAAGCCATCAATATCAGAAATGAG  440

seq1  CCTAGTGACATTGTTGCCTTCCTGCTACCAATAACACACAAGCATCAACA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTGACATTGTTGCCTTCCTGCTACCAATAACACACAAGCATCAACA  490

seq1  CACAAGCATTAACACAAACATTAGCACACAAGCATTAGCACACGAGCATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCATTAACACAAACATTAGCACACAAGCATTAGCACACGAGCATT  540

seq1  AGCACACAAACATTAACACACAAGCATTATTAACTCACAAACATTAACAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACAAACATTAACACACAAGCATTATTAACTCACAAACATTAACAC  590

seq1  ACAAGTGTTAACACACAAGTGTTAACACACAAGCATTAGCACACAAGTAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGTTAACACACAAGTGTTAACACACAAGCATTAGCACACAAGTAT  640

seq1  TAGCACACAAGCAATGCTACTCTGAACTACACGCTCCATTCATTAAAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACACAAGCAATGCTACTCTGAACTACACGCTCCATTCATTAAAAGA  690

seq1  AATTGCAGTTTCCATTTTTAAGAATTTATTTTTATTATTTTAAATTATAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAGTTTCCATTTTTAAGAATTTATTTTTATTATTTTAAATTATAT  740

seq1  GTCTGTGATTGGGTATGTCCATGAGAGTCCAAGTGCCCAAGGAGGCCAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGATTGGGTATGTCCATGAGAGTCCAAGTGCCCAAGGAGGCCAGA  790

seq1  GCATTGGATGTCCTAGAACTGAAGTTGCAGGAGGTTGCCAGCCTTCACAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGATGTCCTAGAACTGAAGTTGCAGGAGGTTGCCAGCCTTCACAT  840

seq1  GGATGCTGGAAACTGAACCCTGGTCCTCTGAAAGAGCAACAAGTGTTCTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGGAAACTGAACCCTGGTCCTCTGAAAGAGCAACAAGTGTTCTT  890

seq1  AACTACTGAGCCATCTCTCCAGCACCAGAAGAAAGTTTAAAATTTAGAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTACTGAGCCATCTCTCCAGCACCAGAAGAAAGTTTAAAATTTAGAAA  940

seq1  GTAATTTAATTTTCCTCAAACTAAAAACTAACACTCAGCCAACACTAACT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTTAATTTTCCTCAAACTAAAAACTAACACTCAGCCAACACTAACT  990

seq1  GTATCATCTACTCCTTATAAACATTAAGGGAAATTAAATTT  1040
      |||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATCTACTCCTTATAAACATTAAGGGAAATTAAATTT  1031