BAC Information

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BAC

Clone NameB6Ng01-094D02
Chromosome9 (Build37)
Map Location 13,802,857 - 13,986,476
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665285, LOC100039729, LOC100039758, Maml2, Mtmr2, Cep57, 2810485I05Rik, LOC665329
Downstream geneSesn3, Endod1, LOC665351, EG547035, Jmjd2d, 0610040D20Rik, Amotl1, EG665374, Piwil4, Fut4, 1700012B09Rik, Ankrd49, Mre11a, LOC100040259, Gpr83, Folr4, Panx1, Hephl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094D02.bB6Ng01-094D02.g
ACCDH905477DH905478
length1,078739
definitionDH905477|Mus musculus domesticus DNA, BAC clone: B6Ng01-094D02, 5' end.DH905478|Mus musculus domesticus DNA, BAC clone: B6Ng01-094D02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,985,392 - 13,986,476)(13,802,857 - 13,803,595)
sequence
gaattctgttcctagcctgttgggccagcatggacatagttgtaaatgtt
caacacatgctgccattttttgtgtggaatggagcattcctgacctggag
tgaagactttaagagctggagaacagctagcaggttctagcacattcaag
agagattcttcacgttttctctagaaagctcgcaaactctcatatttgat
tgatgcgttccacaaaatcaatagtaacacaatcatgcgtttctttgtct
ttaagaccctgtgagctgacagacctaagagagtcactcgcacagagaag
agcacttctgtgcttctgccttctcaactgttatcttgcagcctctgtgg
ccaggttgtcactttggtcttcatttttgtggctagccatgtggagaaaa
gtggtctcaatgtggctatattcacgtatgagggcaactgtgacaaagtc
ccagaaaatggttggcttaatacatatagagttcttggagtcagggagtc
tgaagggtgggtgtcaggcctcctcctgaaagctgtgggtcgggccactt
gcaggccactcccagatgccagtagcctactgtcaatcattagtatctct
tgctttgtataaaacatctcaccaatctgtggcttcaggcccatgtggtt
tctgactctctttcctataaagacactcacatattagatcagagacctgg
ttttatatgattagtattgtagagagcctgtctccactaaggtgccgttc
ttagggtttatggactagaatgttgatgtgagcgttaaaggggcttaata
tccccaggtctgtgagttgtgagttgacagctgaacagagttcgagccca
cagtcctctagtcagtctggcagaaacagtgggactaagtgattttccat
aaatctgtattctgttctgagttcttcctctagtgccagcaggattctct
gtgctcgtcagagtcccagcagacagatgctagaccactccagaaaataa
gctgagctatacaaatatctccaagtcagaggaccagaaatgagagcaaa
gaatgagggggggaaactagaagggggg
gaattctcatacaacccgtggcggaatcattttcactgaccttagggctg
ggctggtttagccttgtggatcagagtcccccacacctgatgctaaagta
ctctctgtacagatgatcatgacatacacgttaggtttcacagtctttcg
aaggcttcatcactgctagttgtggctatatttaaaaagtgtggggtggc
ttttcaatcaatcttaaacatcagaaacagttgaattgaggagttatgat
ttgtaactgtaaatttcacagctaacactcagtttgatatagtctttcct
aatcttcagagttgattgttttaagttccctgtcccttgtagtaatccaa
tccccacatagctacatctactaaaaggagactccaaaccttatctggta
cgaattctaaattcttagagtgagtcaaattcaaacacaactccacgtga
cacggaggaagatcccctacgtctttctgggtaagaaagagtagatgagg
gagggagggaggtgccaacagtaagccatgtatgtgccctgctgtcacag
tgagattttatgcatcccctaggttcctttcagaccttagacaaactcat
ttataaaacagaagttgggtacaactgactcaaggctggcctataactct
cgagatagctgaggataaccttgaatgtcttctttcccagcctcaggctt
gggaattacaaacacgcccccatctccagtttaaattgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_13985392_13986476
seq2: B6Ng01-094D02.b_44_1121 (reverse)

seq1  CCCCCCCTCTAGTTT-CCCCCCTCTGTCTTTTGCTCTCATTTCTGGTTCC  49
      |||||| |||||||| ||||||||  || ||||||||||||||||| |||
seq2  CCCCCCTTCTAGTTTCCCCCCCTCATTC-TTTGCTCTCATTTCTGG-TCC  48

seq1  TCTGACTTGGGAGATATTTGTATAGCTCAGCTTTATTTTCTGGAGTGGTC  99
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  TCTGACTT-GGAGATATTTGTATAGCTCAGC-TTATTTTCTGGAGTGGTC  96

seq1  TTAGCATCTGTCCTGCTGGGACTCTTGACGAGCACAGAGAATCCCTGCTG  149
       |||||||||| |||||||||||| ||||||||||||||||| |||||||
seq2  -TAGCATCTGT-CTGCTGGGACTC-TGACGAGCACAGAGAAT-CCTGCTG  142

seq1  GCACTAGAGGAAGAACTCAGAACAGAATACAGATTTATGGAAAATCACTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGAGGAAGAACTCAGAACAGAATACAGATTTATGGAAAATCACTT  192

seq1  AGTCCCACTGTTTCTGCCAGACTGACTAGAGGACTGTGGGCTCGAACTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCACTGTTTCTGCCAGACTGACTAGAGGACTGTGGGCTCGAACTCT  242

seq1  GTTCAGCTGTCAACTCACAACTCACAGACCTGGGGATATTAAGCCCCTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCTGTCAACTCACAACTCACAGACCTGGGGATATTAAGCCCCTTT  292

seq1  AACGCTCACATCAACATTCTAGTCCATAAACCCTAAGAACGGCACCTTAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTCACATCAACATTCTAGTCCATAAACCCTAAGAACGGCACCTTAG  342

seq1  TGGAGACAGGCTCTCTACAATACTAATCATATAAAACCAGGTCTCTGATC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAGGCTCTCTACAATACTAATCATATAAAACCAGGTCTCTGATC  392

seq1  TAATATGTGAGTGTCTTTATAGGAAAGAGAGTCAGAAACCACATGGGCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATGTGAGTGTCTTTATAGGAAAGAGAGTCAGAAACCACATGGGCCT  442

seq1  GAAGCCACAGATTGGTGAGATGTTTTATACAAAGCAAGAGATACTAATGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACAGATTGGTGAGATGTTTTATACAAAGCAAGAGATACTAATGA  492

seq1  TTGACAGTAGGCTACTGGCATCTGGGAGTGGCCTGCAAGTGGCCCGACCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGTAGGCTACTGGCATCTGGGAGTGGCCTGCAAGTGGCCCGACCC  542

seq1  ACAGCTTTCAGGAGGAGGCCTGACACCCACCCTTCAGACTCCCTGACTCC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTCAGGAGGAGGCCTGACACCCACCCTTCAGACTCCCTGACTCC  592

seq1  AAGAACTCTATATGTATTAAGCCAACCATTTTCTGGGACTTTGTCACAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACTCTATATGTATTAAGCCAACCATTTTCTGGGACTTTGTCACAGT  642

seq1  TGCCCTCATACGTGAATATAGCCACATTGAGACCACTTTTCTCCACATGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTCATACGTGAATATAGCCACATTGAGACCACTTTTCTCCACATGG  692

seq1  CTAGCCACAAAAATGAAGACCAAAGTGACAACCTGGCCACAGAGGCTGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCACAAAAATGAAGACCAAAGTGACAACCTGGCCACAGAGGCTGCA  742

seq1  AGATAACAGTTGAGAAGGCAGAAGCACAGAAGTGCTCTTCTCTGTGCGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAACAGTTGAGAAGGCAGAAGCACAGAAGTGCTCTTCTCTGTGCGAG  792

seq1  TGACTCTCTTAGGTCTGTCAGCTCACAGGGTCTTAAAGACAAAGAAACGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTCTTAGGTCTGTCAGCTCACAGGGTCTTAAAGACAAAGAAACGC  842

seq1  ATGATTGTGTTACTATTGATTTTGTGGAACGCATCAATCAAATATGAGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGTGTTACTATTGATTTTGTGGAACGCATCAATCAAATATGAGAG  892

seq1  TTTGCGAGCTTTCTAGAGAAAACGTGAAGAATCTCTCTTGAATGTGCTAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCGAGCTTTCTAGAGAAAACGTGAAGAATCTCTCTTGAATGTGCTAG  942

seq1  AACCTGCTAGCTGTTCTCCAGCTCTTAAAGTCTTCACTCCAGGTCAGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGCTAGCTGTTCTCCAGCTCTTAAAGTCTTCACTCCAGGTCAGGAA  992

seq1  TGCTCCATTCCACACAAAAAATGGCAGCATGTGTTGAACATTTACAACTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCCATTCCACACAAAAAATGGCAGCATGTGTTGAACATTTACAACTA  1042

seq1  TGTCCATGCTGGCCCAACAGGCTAGGAACAGAATTC  1085
      ||||||||||||||||||||||||||||||||||||
seq2  TGTCCATGCTGGCCCAACAGGCTAGGAACAGAATTC  1078

seq1: chr9_13802857_13803595
seq2: B6Ng01-094D02.g_70_808

seq1  GAATTCTCATACAACCCGTGGCGGAATCATTTTCACTGACCTTAGGGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATACAACCCGTGGCGGAATCATTTTCACTGACCTTAGGGCTG  50

seq1  GGCTGGTTTAGCCTTGTGGATCAGAGTCCCCCACACCTGATGCTAAAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTTTAGCCTTGTGGATCAGAGTCCCCCACACCTGATGCTAAAGTA  100

seq1  CTCTCTGTACAGATGATCATGACATACACGTTAGGTTTCACAGTCTTTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTACAGATGATCATGACATACACGTTAGGTTTCACAGTCTTTCG  150

seq1  AAGGCTTCATCACTGCTAGTTGTGGCTATATTTAAAAAGTGTGGGGTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTCATCACTGCTAGTTGTGGCTATATTTAAAAAGTGTGGGGTGGC  200

seq1  TTTTCAATCAATCTTAAACATCAGAAACAGTTGAATTGAGGAGTTATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAATCAATCTTAAACATCAGAAACAGTTGAATTGAGGAGTTATGAT  250

seq1  TTGTAACTGTAAATTTCACAGCTAACACTCAGTTTGATATAGTCTTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACTGTAAATTTCACAGCTAACACTCAGTTTGATATAGTCTTTCCT  300

seq1  AATCTTCAGAGTTGATTGTTTTAAGTTCCCTGTCCCTTGTAGTAATCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCAGAGTTGATTGTTTTAAGTTCCCTGTCCCTTGTAGTAATCCAA  350

seq1  TCCCCACATAGCTACATCTACTAAAAGGAGACTCCAAACCTTATCTGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCACATAGCTACATCTACTAAAAGGAGACTCCAAACCTTATCTGGTA  400

seq1  CGAATTCTAAATTCTTAGAGTGAGTCAAATTCAAACACAACTCCACGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATTCTAAATTCTTAGAGTGAGTCAAATTCAAACACAACTCCACGTGA  450

seq1  CACGGAGGAAGATCCCCTACGTCTTTCTGGGTAAGAAAGAGTAGATGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGAGGAAGATCCCCTACGTCTTTCTGGGTAAGAAAGAGTAGATGAGG  500

seq1  GAGGGAGGGAGGTGCCAACAGTAAGCCATGTATGTGCCCTGCTGTCACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGGGAGGTGCCAACAGTAAGCCATGTATGTGCCCTGCTGTCACAG  550

seq1  TGAGATTTTATGCATCCCCTAGGTTCCTTTCAGACCTAAGACAAACTCAT  600
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TGAGATTTTATGCATCCCCTAGGTTCCTTTCAGACCTTAGACAAACTCAT  600

seq1  TTATAAAACAGAAGTTGGGTACAACTGACTCAAGGCTGGCCTAGAACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTATAAAACAGAAGTTGGGTACAACTGACTCAAGGCTGGCCTATAACTCT  650

seq1  CGAGATAGCTGAGGATAACCTTGAATGTCTTCTTTCCCTGCCTCAGGCTT  700
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CGAGATAGCTGAGGATAACCTTGAATGTCTTCTTTCCCAGCCTCAGGCTT  700

seq1  GGGAATTACAAACACGCCACCATCTCCAGTTTAAATTGC  739
      |||||||||||||||||| ||||||||||||||||||||
seq2  GGGAATTACAAACACGCCCCCATCTCCAGTTTAAATTGC  739