BAC Information

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BAC

Clone NameB6Ng01-094F10
Chromosome9 (Build37)
Map Location 118,145,447 - 118,293,637
singlet/doubletdoublet
Overlap genenone
Upstream geneRbms3, LOC665840, LOC100039650, LOC100039681, Azi2, 2010110K16Rik
Downstream geneEomes, Golga4, Itga9, LOC100039768, Ctdspl, Vill, Plcd1, Dlec1, Acaa1b, EG546165, Slc22a14, Slc22a13, 9330176C04Rik, Oxsr1, Myd88, Acaa1a, Xylb
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094F10.bB6Ng01-094F10.g
ACCDH905589DH905590
length7821,024
definitionDH905589|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F10, 5' end.DH905590|Mus musculus domesticus DNA, BAC clone: B6Ng01-094F10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,145,447 - 118,146,228)(118,292,616 - 118,293,637)
sequence
gaattcaagcagggcaggaagcaggagctgatacatggagggatgttaac
tcctggcttgcttcctctggcttgctcagcctgctgtcttatagaaccca
ggactaccagcccagggatggcaccacccacaatgggtcctcccgactta
accactaattgagaaaatgccttacagctggatctcatggaggcatttcc
tcaagggagactcctttctctgagacaactccagcctgtgtcaagttgac
atacaaaaccagccagtatgctacctttcaaatatgagaataaaagaaag
atggcaaaaccggagacccacctgtcagacctgccgtatgggagatgcta
aagaaagcttgagctgaagcaagtaggtctgcagtgtgacttcaaggcaa
aaaaaaaaaaaaaaaaaaaaaatggccgggcagtggtggtgcacgccttt
aatcccagcacttgggaggcagaggcaggcggatttctgagttcgaggcc
agcctggtctacagagtgagttccaggacagccagggctacagagaaact
ctgtcttgaaaaaccaaaaaccaaaaaccaaaaaacaaaaaaaaaatgta
ctgttataggaacgttaaatcctgtaaaatgaaaatatggaggagactgt
gtggggagaagatgactgaaagagcgagtgaatgggagacaggtgaaagg
gtagtggggtttgtgtgggatgcaagcagcatctgagaaagggacaaatg
gggggagggggtacctagaaaaccagagaggc
gaattccttcaagcacatgatatatcctgaccatactcaccctcatatgc
ctgcctcggtctcctccatttttccctcctcctgctctccttccttcccc
cagtctccttttgattttcctcttcctcaccacatgcacacacacacgca
cacacacacatatgtctgtatgttcgtgtatactcagagttgcagaagaa
ttatgttgtaaattggagtttgtacacacatgcacatgtggactatgtat
ttatacaaatgagaaaatttgcactgctggtctctctgtgtctggcttat
tctacttcataggacaatctctaacttcactctctttcctgaaaatgaca
ggttcgtgttctttatggctgactgtaactccattgtggagagagccaag
ctttaaacccaacagttctcagcacgggagtcacttcctcaggcagtcag
ccagagccacgtataaaacagtaggctttagaaaatgtaatgtcatagga
acacaataggctgttgagctgcaggagggagggaattttgttataataaa
ctgaagtagcatatatggtagtggatatggggcttatttagcagatagat
tccaaatcaacttggtagcccatgtttaaattactagagccattctaagt
agatcttggagacgtagaagttgttagacattaactagaactttcaaagg
tcacttcatcttgcaaactataaaggcctgccaggcatatagttctaaga
tgtactgtagatggactcagcttaaattgtgcatgcctgtgtagaactgc
aaaactctaaaatattttctaatttgctaaagaggaatacatagcctggg
tatgtaactcagtagaatgcctgcttagcaagaccctgggttggatccct
agaaccccataaatcaggacatgtctgcagtcttcagtagtggaggccat
cttagttcaaggcagtcagaagcttaattgatgattttgtagtaaaaaag
agggggacgtgggaggggagaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_118145447_118146228
seq2: B6Ng01-094F10.b_48_829

seq1  GAATTCAAGCAGGGCAGGAAGCAGGAGCTGATACATGGAGGGATGTTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGCAGGGCAGGAAGCAGGAGCTGATACATGGAGGGATGTTAAC  50

seq1  TCCTGGCTTGCTTCCTCTGGCTTGCTCAGCCTGCTGTCTTATAGAACCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGCTTGCTTCCTCTGGCTTGCTCAGCCTGCTGTCTTATAGAACCCA  100

seq1  GGACTACCAGCCCAGGGATGGCACCACCCACAATGGGTCCTCCCGACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTACCAGCCCAGGGATGGCACCACCCACAATGGGTCCTCCCGACTTA  150

seq1  ACCACTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTAATTGAGAAAATGCCTTACAGCTGGATCTCATGGAGGCATTTCC  200

seq1  TCAAGGGAGACTCCTTTCTCTGAGACAACTCCAGCCTGTGTCAAGTTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGGAGACTCCTTTCTCTGAGACAACTCCAGCCTGTGTCAAGTTGAC  250

seq1  ATACAAAACCAGCCAGTATGCTACCTTTCAAATATGAGAATAAAAGAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAACCAGCCAGTATGCTACCTTTCAAATATGAGAATAAAAGAAAG  300

seq1  ATGGCAAAACCGGAGACCCACCTGTCAGACCTGCCGTATGGGAGATGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAAAACCGGAGACCCACCTGTCAGACCTGCCGTATGGGAGATGCTA  350

seq1  AAGAAAGCTTGAGCTGAAGCAAGTAGGTCTGCAGTGTGACTTCAAGGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGCTTGAGCTGAAGCAAGTAGGTCTGCAGTGTGACTTCAAGGCAA  400

seq1  AAAAAAAAAAAAAAAAAAAAAATGGCCGGGCAGTGGTGGTGCACGCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAAAATGGCCGGGCAGTGGTGGTGCACGCCTTT  450

seq1  AATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCAGCACTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCC  500

seq1  AGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACAGAGAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGCTACAGAGAAACT  550

seq1  CTGTCTTGAAAAACCAAAAACCAAAAACCAAAAAACAAAAAAAAAATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTTGAAAAACCAAAAACCAAAAACCAAAAAACAAAAAAAAAATGTA  600

seq1  CTGTTATAGGAACGTTAAATCCTGTAAAATGAAAATATGGAGGAGACTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTATAGGAACGTTAAATCCTGTAAAATGAAAATATGGAGGAGACTGT  650

seq1  GTGGGGAGAAGATGACTGAAAGAGCGAGTGAATGGGAGACAGGTGAAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAGAAGATGACTGAAAGAGCGAGTGAATGGGAGACAGGTGAAAGG  700

seq1  GTAGTGGGGTTTGTGTGGGATGCAAGCAGCATCGGAGAAAGGGAC-AATG  749
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  GTAGTGGGGTTTGTGTGGGATGCAAGCAGCATCTGAGAAAGGGACAAATG  750

seq1  GGGGGAGGGGGCAGCGAGAAGAACCAGAGAGGC  782
      ||||||||||| | | |||| ||||||||||||
seq2  GGGGGAGGGGGTACCTAGAA-AACCAGAGAGGC  782

seq1: chr9_118292616_118293637
seq2: B6Ng01-094F10.g_70_1093 (reverse)

seq1  CCCTCTCCCCTCCC-CGTCCCCCTCTTTTTTACTACAAATTC-TCAATT-  47
      |||||||||||||| |||||||||||||||||||||||| || |||||| 
seq2  CCCTCTCCCCTCCCACGTCCCCCTCTTTTTTACTACAAAATCATCAATTA  50

seq1  AGC-TCTGACTGGCCCTGAACTAAGGATGGCCTCAACTACTG-AGACTGC  95
      ||| ||||||| ||| |||||||| ||||||||| ||||||| |||||||
seq2  AGCTTCTGACT-GCCTTGAACTAA-GATGGCCTCCACTACTGAAGACTGC  98

seq1  AGACATGTTCCTGATTTATGGGGTTCTAGGGATCCAACCCAGGGTCTTGC  145
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATG-TCCTGATTTATGGGGTTCTAGGGATCCAACCCAGGGTCTTGC  147

seq1  TAAGCAGGCATTCTACTGAGTTACATACCCAGGCTATGTATTCCTCTTTA  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCAGGCATTCTACTGAGTTACATACCCAGGCTATGTATTCCTCTTTA  197

seq1  GCAAATTAGAAAATATTTTAGAGTTTTGCAGTTCTACACAGGCATGCACA  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTAGAAAATATTTTAGAGTTTTGCAGTTCTACACAGGCATGCACA  247

seq1  ATTTAAGCTGAGTCCATCTACAGTACATCTTAGAACTATATGCCTGGCAG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAGCTGAGTCCATCTACAGTACATCTTAGAACTATATGCCTGGCAG  297

seq1  GCCTTTATAGTTTGCAAGATGAAGTGACCTTTGAAAGTTCTAGTTAATGT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTATAGTTTGCAAGATGAAGTGACCTTTGAAAGTTCTAGTTAATGT  347

seq1  CTAACAACTTCTACGTCTCCAAGATCTACTTAGAATGGCTCTAGTAATTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAACTTCTACGTCTCCAAGATCTACTTAGAATGGCTCTAGTAATTT  397

seq1  AAACATGGGCTACCAAGTTGATTTGGAATCTATCTGCTAAATAAGCCCCA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGGCTACCAAGTTGATTTGGAATCTATCTGCTAAATAAGCCCCA  447

seq1  TATCCACTACCATATATGCTACTTCAGTTTATTATAACAAAATTCCCTCC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACTACCATATATGCTACTTCAGTTTATTATAACAAAATTCCCTCC  497

seq1  CTCCTGCAGCTCAACAGCCTATTGTGTTCCTATGACATTACATTTTCTAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGCAGCTCAACAGCCTATTGTGTTCCTATGACATTACATTTTCTAA  547

seq1  AGCCTACTGTTTTATACGTGGCTCTGGCTGACTGCCTGAGGAAGTGACTC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTACTGTTTTATACGTGGCTCTGGCTGACTGCCTGAGGAAGTGACTC  597

seq1  CCGTGCTGAGAACTGTTGGGTTTAAAGCTTGGCTCTCTCCACAATGGAGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTGCTGAGAACTGTTGGGTTTAAAGCTTGGCTCTCTCCACAATGGAGT  647

seq1  TACAGTCAGCCATAAAGAACACGAACCTGTCATTTTCAGGAAAGAGAGTG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCAGCCATAAAGAACACGAACCTGTCATTTTCAGGAAAGAGAGTG  697

seq1  AAGTTAGAGATTGTCCTATGAAGTAGAATAAGCCAGACACAGAGAGACCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGAGATTGTCCTATGAAGTAGAATAAGCCAGACACAGAGAGACCA  747

seq1  GCAGTGCAAATTTTCTCATTTGTATAAATACATAGTCCACATGTGCATGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCAAATTTTCTCATTTGTATAAATACATAGTCCACATGTGCATGT  797

seq1  GTGTACAAACTCCAATTTACAACATAATTCTTCTGCAACTCTGAGTATAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACAAACTCCAATTTACAACATAATTCTTCTGCAACTCTGAGTATAC  847

seq1  ACGAACATACAGACATATGTGTGTGTGTGCGTGTGTGTGTGCATGTGGTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACATACAGACATATGTGTGTGTGTGCGTGTGTGTGTGCATGTGGTG  897

seq1  AGGAAGAGGAAAATCAAAAGGAGACTGGGGGAAGGAAGGAGAGCAGGAGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGGAAAATCAAAAGGAGACTGGGGGAAGGAAGGAGAGCAGGAGG  947

seq1  AGGGAAAAATGGAGGAGACCGAGGCAGGCATATGAGGGTGAGTATGGTCA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAATGGAGGAGACCGAGGCAGGCATATGAGGGTGAGTATGGTCA  997

seq1  GGATATATCATGTGCTTGAAGGAATTC  1022
      |||||||||||||||||||||||||||
seq2  GGATATATCATGTGCTTGAAGGAATTC  1024