BAC Information

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BAC

Clone NameB6Ng01-094M17
Chromosome9 (Build37)
Map Location 32,389,235 - 32,559,307
singlet/doubletdoublet
Overlap geneLOC669759, LOC100041398, Ets1
Upstream geneEG666576, Barx2, LOC100042266, Tpi-rs4, LOC666619, LOC666622, Grit, Kcnj5, Kcnj1, Fli1
Downstream geneLOC100041426, LOC100042343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094M17.bB6Ng01-094M17.g
ACCDH905915DH905916
length1,1531,076
definitionDH905915|Mus musculus domesticus DNA, BAC clone: B6Ng01-094M17, 5' end.DH905916|Mus musculus domesticus DNA, BAC clone: B6Ng01-094M17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,558,150 - 32,559,307)(32,389,235 - 32,390,316)
sequence
gaattctcagtgactcaacgggatagatactgttattagtctatcggttc
ctaccgtgcaggaaaacaacaacaaaaccacaatgtacaacacagctatc
taacttgggtgaaggcaatcagaagagaaacaggatagctgggtcaagac
ttcagattcttcaatacactgcccaaaccaaaagccaagggcctaattag
attccctgcctggttgccgtaactcgagtgctaaatggttctagctttca
gaagccatctcccttgcttctcacgtagtcacactcttgagatacacatg
gcctactatgctgggtacctatcccaacaagtgacagtgccagccccaga
aggccccctgaagtggctaagttttatactattagaacctctctcgtact
gtcttaaaattttctcttagagcaaggctaacctattaagattaggagag
ggatggaaagatgaaaagacccagacaggtcctagtcactgacggatggg
tagcgagcataattgcaggtcctaaagaggcagactcaggagtacagcac
aggctgggacagacaaaaagaagaggacttcaaaatcacattatgagtgc
cagcttgggggacagaagaaatttacagtgttacctaagcttcagtggcc
aagaactcaccacagcctatgggtgatgaccactaatgtctgaatgtggc
tggacaggggagtcctcacatggaagctttttctccttaatgttactttt
cctacgttcagagggaacaacaacaacaacaaaatagtgttggtatgagc
attggtaacccacctcctaggattaactattcttgccatcttttattcta
gaccagagagaagaagaaaaaggagacaagttatctcagcaagcagagct
ggaaaggtaagacatgtctcttgttcactgagtggcaacatcagctcaag
tctccttcctgggactcttgcagaaaacacaggttagctgacccgagcgc
ctctcagcagcccgccaggatttaacgctagcattcattctgggttgcag
tcccagcatatatgaggctaaatgagaagtgaaaattcaagaccattctg
ggttacacagggaacccctccctctctacctcattaggataagaaccgac
cat
gaattctgtatgtctcagatctcttgtctagtaggagatcttgggaggag
gggtgttagtgttacggtgcaccaagttaacacattgaaagtcattggaa
ggcacccatcactcagcctctccagtgaggccagagtttgcctaacctta
gatgacgagaatctccacctaggttgccagatggcacgcacatgtggatt
ttatggtgggagttcagagccaatggagcctagacatgtataacaagagt
tcatatgggtacatatgggtacatatgggagatctctgtatctcagtctt
agacaaggatgtattttctctcagagtagagaggtagctatcacaaggat
gccatgtaaaggaatgtgggggactgagattaggctgccatctgcctgtt
gagcacgtaaaggaagtagagaggagtcttgcacatcaaaacacacctcc
tgttcctctttacagtgtcagcaggaaagaccctagcatctgcgtccctg
tttctgccagattgctgtgtttcttaaaacctgagcaccctttgacgttc
ctgtttgtcttagcttatggccaaccaggcactacctatgggtttatggg
gcataggtttatcttctaagacagccctttctctcctagacttcctcaca
agcttcctgtttccatcggaagccgtgtgtcctgctaagcttttcatggg
ttcactgtgtggagtggaggagcccagtggccagagcgctccacacagcc
tgcttccttcctccctttcctttctttcttcctgtttcactcttattctc
tccacgacattctccacttgccccaaatcctcacactttcctcttaagtt
ccgcacaaggattcagacagcctgaggcatccttaatcgaggccgaacct
tcgggggctgatttttattcattggataaggtagttatttctggtgtgtg
aaagaaacccatggaaagccatgggagaaattcatacacccaagccgaat
cttctaccaatacattatggagagaccttgagagtccgcattctctacct
agcggagactaacatttaacaacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_32558150_32559307
seq2: B6Ng01-094M17.b_45_1197 (reverse)

seq1  ATGGTCGGTTCTTATCCTCACTTTGGGGTGGAGAGGGGAGGGGTCTCACT  50
      |||||||||||||||||| |   || ||| |||| ||||||||| || ||
seq2  ATGGTCGGTTCTTATCCTAA---TGAGGTAGAGA-GGGAGGGGT-TCCCT  45

seq1  GTGTAGACCAGGATGGTCTTGAATTTTCACTTCTCATTTAGCCTCAATAA  100
      |||||  |||| ||||||||||||||||||||||||||||||||||   |
seq2  GTGTAACCCAGAATGGTCTTGAATTTTCACTTCTCATTTAGCCTCATATA  95

seq1  TGCTGGGACTGC-ACACAG-ATGGATGCTAGCGTTTAAATTCCTGCGGGC  148
      |||||||||||| || ||| ||| ||||||||| |||||| |  ||||||
seq2  TGCTGGGACTGCAACCCAGAATGAATGCTAGCG-TTAAATCCTGGCGGGC  144

seq1  TGCTGGGA-GCGCTCGGGTCAGCTAACCTGTGTTTTCTGCAAGAGTCCCA  197
      ||||| || |||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGAGGCGCTCGGGTCAGCTAACCTGTGTTTTCTGCAAGAGTCCCA  194

seq1  GGAAGGAGACTTGAGCTGATGTTGCCACTCAGTGAACAAGAGACATGTCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAGACTTGAGCTGATGTTGCCACTCAGTGAACAAGAGACATGTCT  244

seq1  TACCTTTCCAGCTCTGCTTGCCTGAGATAACTTGTCTTCCTTTTTCTTCT  297
      |||||||||||||||||||| ||||||||||||||| |||||||||||||
seq2  TACCTTTCCAGCTCTGCTTG-CTGAGATAACTTGTC-TCCTTTTTCTTCT  292

seq1  TCTCTCTGGTCTAGAATAAAAGATGGCAAGAATAGTTAATCCTAGGAGGT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGGTCTAGAATAAAAGATGGCAAGAATAGTTAATCCTAGGAGGT  342

seq1  GGGTTACCAATGCTCATACCAACACTATTTTGTTGTTGTTGTTGTTCCCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTACCAATGCTCATACCAACACTATTTTGTTGTTGTTGTTGTTCCCT  392

seq1  CTGAACGTAGGAAAAGTAACATTAAGGAGAAAAAGCTTCCATGTGAGGAC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACGTAGGAAAAGTAACATTAAGGAGAAAAAGCTTCCATGTGAGGAC  442

seq1  TCCCCTGTCCAGCCACATTCAGACATTAGTGGTCATCACCCATAGGCTGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGTCCAGCCACATTCAGACATTAGTGGTCATCACCCATAGGCTGT  492

seq1  GGTGAGTTCTTGGCCACTGAAGCTTAGGTAACACTGTAAATTTCTTCTGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGTTCTTGGCCACTGAAGCTTAGGTAACACTGTAAATTTCTTCTGT  542

seq1  CCCCCAAGCTGGCACTCATAATGTGATTTTGAAGTCCTCTTCTTTTTGTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAGCTGGCACTCATAATGTGATTTTGAAGTCCTCTTCTTTTTGTC  592

seq1  TGTCCCAGCCTGTGCTGTACTCCTGAGTCTGCCTCTTTAGGACCTGCAAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCAGCCTGTGCTGTACTCCTGAGTCTGCCTCTTTAGGACCTGCAAT  642

seq1  TATGCTCGCTACCCATCCGTCAGTGACTAGGACCTGTCTGGGTCTTTTCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCGCTACCCATCCGTCAGTGACTAGGACCTGTCTGGGTCTTTTCA  692

seq1  TCTTTCCATCCCTCTCCTAATCTTAATAGGTTAGCCTTGCTCTAAGAGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCATCCCTCTCCTAATCTTAATAGGTTAGCCTTGCTCTAAGAGAA  742

seq1  AATTTTAAGACAGTACGAGAGAGGTTCTAATAGTATAAAACTTAGCCACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTAAGACAGTACGAGAGAGGTTCTAATAGTATAAAACTTAGCCACT  792

seq1  TCAGGGGGCCTTCTGGGGCTGGCACTGTCACTTGTTGGGATAGGTACCCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGGCCTTCTGGGGCTGGCACTGTCACTTGTTGGGATAGGTACCCA  842

seq1  GCATAGTAGGCCATGTGTATCTCAAGAGTGTGACTACGTGAGAAGCAAGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGTAGGCCATGTGTATCTCAAGAGTGTGACTACGTGAGAAGCAAGG  892

seq1  GAGATGGCTTCTGAAAGCTAGAACCATTTAGCACTCGAGTTACGGCAACC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCTTCTGAAAGCTAGAACCATTTAGCACTCGAGTTACGGCAACC  942

seq1  AGGCAGGGAATCTAATTAGGCCCTTGGCTTTTGGTTTGGGCAGTGTATTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGGAATCTAATTAGGCCCTTGGCTTTTGGTTTGGGCAGTGTATTG  992

seq1  AAGAATCTGAAGTCTTGACCCAGCTATCCTGTTTCTCTTCTGATTGCCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATCTGAAGTCTTGACCCAGCTATCCTGTTTCTCTTCTGATTGCCTT  1042

seq1  CACCCAAGTTAGATAGCTGTGTTGTACATTGTGGTTTTGTTGTTGTTTTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAAGTTAGATAGCTGTGTTGTACATTGTGGTTTTGTTGTTGTTTTC  1092

seq1  CTGCACGGTAGGAACCGATAGACTAATAACAGTATCTATCCCGTTGAGTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACGGTAGGAACCGATAGACTAATAACAGTATCTATCCCGTTGAGTC  1142

seq1  ACTGAGAATTC  1158
      |||||||||||
seq2  ACTGAGAATTC  1153

seq1: chr9_32389235_32390316
seq2: B6Ng01-094M17.g_70_1145

seq1  GAATTCTGTATGTCTCAGATCTCTTGTCTAGTAGGAGATCTTGGGAGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATGTCTCAGATCTCTTGTCTAGTAGGAGATCTTGGGAGGAG  50

seq1  GGGTGTTAGTGTTACGGTGCACCAAGTTAACACATTGAAAGTCATTGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTTAGTGTTACGGTGCACCAAGTTAACACATTGAAAGTCATTGGAA  100

seq1  GGCACCCATCACTCAGCCTCTCCAGTGAGGCCAGAGTTTGCCTAACCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACCCATCACTCAGCCTCTCCAGTGAGGCCAGAGTTTGCCTAACCTTA  150

seq1  GATGACGAGAATCTCCACCTAGGTTGCCAGATGGCACGCACATGTGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACGAGAATCTCCACCTAGGTTGCCAGATGGCACGCACATGTGGATT  200

seq1  TTATGGTGGGAGTTCAGAGCCAATGGAGCCTAGACATGTATAACAAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTGGGAGTTCAGAGCCAATGGAGCCTAGACATGTATAACAAGAGT  250

seq1  TCATATGGGTACATATGGGTACATATGGGAGATCTCTGTATCTCAGTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATGGGTACATATGGGTACATATGGGAGATCTCTGTATCTCAGTCTT  300

seq1  AGACAAGGATGTATTTTCTCTCAGAGTAGAGAGGTAGCTATCACAAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGATGTATTTTCTCTCAGAGTAGAGAGGTAGCTATCACAAGGAT  350

seq1  GCCATGTAAAGGAATGTGGGGGACTGAGATTAGGCTGCCATCTGCCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGTAAAGGAATGTGGGGGACTGAGATTAGGCTGCCATCTGCCTGTT  400

seq1  GAGCACGTAAAGGAAGTAGAGAGGAGTCTTGCACATCAAAACACACCTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACGTAAAGGAAGTAGAGAGGAGTCTTGCACATCAAAACACACCTCC  450

seq1  TGTTCCTCTTTACAGTGTCAGCAGGAAAGACCCTAGCATCTGCGTCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCTTTACAGTGTCAGCAGGAAAGACCCTAGCATCTGCGTCCCTG  500

seq1  TTTCTGCCAGATTGCTGTGTTTCTTAAAACCTGAGCACCCTTTGACGTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCCAGATTGCTGTGTTTCTTAAAACCTGAGCACCCTTTGACGTTC  550

seq1  CTGTTTGTCTTAGCTTATGGCCAACCAGGCACTACCTATGGGTTTATGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGTCTTAGCTTATGGCCAACCAGGCACTACCTATGGGTTTATGGG  600

seq1  GCATAGGTTTATCTTCTAAGACAGCCCTTTCTCTCCTAGACTTCCTCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGTTTATCTTCTAAGACAGCCCTTTCTCTCCTAGACTTCCTCACA  650

seq1  AGCTTCCTGTTTCCATCGGAAGCCGTGTGTCCTGCTAAGC-TTTCATGGG  699
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGCTTCCTGTTTCCATCGGAAGCCGTGTGTCCTGCTAAGCTTTTCATGGG  700

seq1  TTCACTGTGTGGAGTGGAGGAGCCCAGTGGCCAGAGCGCTCCACACAGCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGTGTGGAGTGGAGGAGCCCAGTGGCCAGAGCGCTCCACACAGCC  750

seq1  TGCTTTCTTCCTCCCTTTCCTTTCTTTCTTCCTGTTTCACTCTTA-TCTC  798
      ||||| ||||||||||||||||||||||||||||||||||||||| ||||
seq2  TGCTTCCTTCCTCCCTTTCCTTTCTTTCTTCCTGTTTCACTCTTATTCTC  800

seq1  TCCACGACATTCTCCACTTGCCCCAAATCCTCACAC-TTCCTCTTCAGGT  847
      |||||||||||||||||||||||||||||||||||| |||||||| | ||
seq2  TCCACGACATTCTCCACTTGCCCCAAATCCTCACACTTTCCTCTT-AAGT  849

seq1  TCCGCACAAGGATTTCAGACAGCCTGAGGCATCCTTTATTCGAGGCCGGA  897
      |||||||||||| ||||||||||||||||||||| ||| |||||||| ||
seq2  TCCGCACAAGGA-TTCAGACAGCCTGAGGCATCC-TTAATCGAGGCC-GA  896

seq1  ACCTTCGGGGGCTGATTTTTA-TCATTGGATAAGGTAGTTA-TTCTGGTG  945
      ||||||||||||||||||||| ||||||||||||||||||| ||||||||
seq2  ACCTTCGGGGGCTGATTTTTATTCATTGGATAAGGTAGTTATTTCTGGTG  946

seq1  TGTTGAAGAAAACCCATGGAAAAGCCAT-GGAGAATTCAATAACTCCAAA  994
      || ||||  |||||||||| |||||||| |||||| |  || || || ||
seq2  TG-TGAAAGAAACCCATGG-AAAGCCATGGGAGAAATTCAT-ACACCCAA  993

seq1  GCCCGAATCTCCTACCAAATACAGTCTGGAAGAAGAGCTTGAGAGTCCGC  1044
      | |||||||| ||||| |||||| | ||||   ||| |||||||||||||
seq2  G-CCGAATCTTCTACC-AATACATTATGGA--GAGACCTTGAGAGTCCGC  1039

seq1  AATTCT-TACTTAGCGGAGACAAAACATTAAACAACTTT  1082
       ||||| ||| ||||||||||  |||||| |||||||||
seq2  -ATTCTCTACCTAGCGGAGAC-TAACATTTAACAACTTT  1076