BAC Information

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BAC

Clone NameB6Ng01-094N22
Chromosome9 (Build37)
Map Location 39,809,002 - 39,963,218
singlet/doubletdoublet
Overlap geneOlfr980, Olfr981, 1700001J11Rik, Olfr982, Olfr983, Olfr984, Olfr985, 1700030E15Rik
Upstream geneOlfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1, Olfr978, Olfr979
Downstream geneLOC235279, Olfr986, Zfp202, Scn3b, Gramd1b, LOC270148, 9030425E11Rik, LOC100043076, LOC100043071, Hspa8, Bsx, 4931429I11Rik, Crtam, 2810457I06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094N22.bB6Ng01-094N22.g
ACCDH905967DH905968
length1,1651,139
definitionDH905967|Mus musculus domesticus DNA, BAC clone: B6Ng01-094N22, 5' end.DH905968|Mus musculus domesticus DNA, BAC clone: B6Ng01-094N22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(39,809,002 - 39,810,194)(39,962,087 - 39,963,218)
sequence
gaattctcacagctacataaaacatacaaatgtgcgattctgaacatttt
gtggctcagacttgctatggtaaaacttatctgtcttaaaactcaaggtg
aaaaattgattgaataatctcacctgaggagggtcagaattttgttttgt
gctattacagcagtgatgagtcttaattttgtgcaattttagatccacac
ttctcatgtgtttaatgcttcttagcatattccagtaacctaggattcta
caagacaccctaggacctatccaatcctaagcaggtggccacttcactgc
atggcaggtgcttttctgtcacctggagaatcacttttctattggcaaga
taaagtgtggtgccagagaaccagtgaaataagtaatagctgagtacata
tttggaaaaacatgattattcagggaaaatgaagtcatgtgtagcaatat
tggagtctgtttacagttctgcttaccagaatcattttctccattggatc
tccaaagaaacttcaagaatcaaaaacttgttgacattaatgagtatctt
tgaagcctatgccatatttcagtcgactgctattatacacattattgaac
aatgctaatattgtctccatagctgaaaagattcaagctaagattgacct
gcaaccagggaatgacagtggagtatacggtactagtctttctgaagaac
tgaagacttgcctttcctggatcttagaaaggtaatatgtcaagcctctt
ggtttccagaaaactcccagtctggcagcaagctgtcaagggctttgttc
ctctcctttagtggtgccccatggctgcctgcttctcaaagagtctctct
agactctccaaatcacataaaatatcagctacatagtagacttacctcag
tccagaaaacagaaagctcctacatatttaccccctgattcctctatact
tatatatcataagacatcagatgtatatgtgctctcttacacaaaatgcg
aagaagatgtttgctagcatgttttgtactagatatgtactttctgaata
ctggctttgtaaggattatatttatcacccccattctgaactctcaaccc
tcaagaacttgctctccacgaaggtgatgtttcagtcaatcggtgccatt
cgaactatgactgaa
gaattcattggatttccttattcctcttcccaatgtagccttatcaaatc
aatctttattttgttctttccacttttaatttggctcttttcactggctt
attgaggactggtggttggaccagtcctgtcgacaacaggaagtggagca
tgactggaaccaaggaatttgatttttatgcaaggactaggtctcaccat
aacaatttcccctgattcctgggtttcccagaaagagtcagtgtttccac
tttacgtctttaatctgtagtgatctgcattatcctcagctgtttgcaac
agctgcttttatttctattaacgattatatgaccagtatgtaggaaacag
ctgtgtgttcctcctgccagagtctcttctggctttgtgggcctgtagta
tgttttcatgcataaagaatagtgagtccaacaatgcgttccttcagcat
gccccaggaatcaaatgctaattataaattgatgccattcatgttatgtt
aatatttatggatacaaaaatacttgtttacgatttagagaactgtgtgt
ggcgagtcctttgcctccattttatggaaagctattctttactagatgaa
attttgttttttttttgttgtgtgagtttgattctgctcaaaacttgatg
cctttcgagtttaaaagttgacagtaaattactactgaattcttaaaatt
ctcgaatgccaacttctctctgaagtcctcctcaacaagtttattttatg
aaagaaataacctataaaagataatagtatgcttggttatttatgtataa
tacatttctctcaaccttttcaagtgttgtccctaagtcagaagccatca
gagagatgcttgggacccatgaagccaaattcttggttttgttactagct
gactacagcggctgcagtctgtcttttgagtctgtggaggatatggacag
ggaaataatactgcttgttattgaacttgaagtccaaccttgatgttatt
ctttttgtgagttggatgattgagtcataccaagactatggcttcctcgg
gggaagatcttccacaacctggaggcaacttagagtcacaggttggcttt
catgacctcttggaaatctttctctcttgaaggggataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_39809002_39810194
seq2: B6Ng01-094N22.b_51_1215

seq1  GAATTCTCACAGCTACATAAAACATACAAATGTGCGATTCTGAACATTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAGCTACATAAAACATACAAATGTGCGATTCTGAACATTTT  50

seq1  GTGGCTCAGACTTGCTATGGTAAAACTTATCTGTCTTAAAACTCAAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCAGACTTGCTATGGTAAAACTTATCTGTCTTAAAACTCAAGGTG  100

seq1  AAAAATTGATTGAATAATCTCACCTGAGGAGGGTCAGAATTTTGTTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTGATTGAATAATCTCACCTGAGGAGGGTCAGAATTTTGTTTTGT  150

seq1  GCTATTACAGCAGTGATGAGTCTTAATTTTGTGCAATTTTAGATCCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTACAGCAGTGATGAGTCTTAATTTTGTGCAATTTTAGATCCACAC  200

seq1  TTCTCATGTGTTTAATGCTTCTTAGCATATTCCAGTAACCTAGGATTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCATGTGTTTAATGCTTCTTAGCATATTCCAGTAACCTAGGATTCTA  250

seq1  CAAGACACCCTAGGACCTATCCAATCCTAAGCAGGTGGCCACTTCACTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACACCCTAGGACCTATCCAATCCTAAGCAGGTGGCCACTTCACTGC  300

seq1  ATGGCAGGTGCTTTTCTGTCACCTGGAGAATCACTTTTCTATTGGCAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCAGGTGCTTTTCTGTCACCTGGAGAATCACTTTTCTATTGGCAAGA  350

seq1  TAAAGTGTGGTGCCAGAGAACCAGTGAAATAAGTAATAGCTGAGTACATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGTGGTGCCAGAGAACCAGTGAAATAAGTAATAGCTGAGTACATA  400

seq1  TTTGGAAAAACATGATTATTCAGGGAAAATGAAGTCATGTGTAGCAATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAAAACATGATTATTCAGGGAAAATGAAGTCATGTGTAGCAATAT  450

seq1  TGGAGTCTGTTTACAGTTCTGCTTACCAGAATCATTTTCTCCATTGGATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGTCTGTTTACAGTTCTGCTTACCAGAATCATTTTCTCCATTGGATC  500

seq1  TCCAAAGAAACTTCAAGAATCAAAAACTTGTTGACATTAATGAGTATCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAGAAACTTCAAGAATCAAAAACTTGTTGACATTAATGAGTATCTT  550

seq1  TGAAGCCTATGCCATATTTCAGTCGACTGCTATTATACACATTATTGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCTATGCCATATTTCAGTCGACTGCTATTATACACATTATTGAAC  600

seq1  AATGCTAATATTGTCTCCATAGCTGAAAAGATTCAAGCTAAGATTGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTAATATTGTCTCCATAGCTGAAAAGATTCAAGCTAAGATTGACCT  650

seq1  GCAACCAGGGAATGACAGTGGAGTATACGGTACTAGTCTTTCTGAAGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCAGGGAATGACAGTGGAGTATACGGTACTAGTCTTTCTGAAGAAC  700

seq1  TGAAGACTTGCCTTTCCTGGATCTTAGAAAGGTAATATGTCAAGCCTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGACTTGCCTTTCCTGGATCTTAGAAAGGTAATATGTCAAGCCTCTT  750

seq1  GGTTTCCAGAAAACTCCCAGTCTGGCAGCAAGCTGTCAAGGGCTTTGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCAGAAAACTCCCAGTCTGGCAGCAAGCTGTCAAGGGCTTTGTTC  800

seq1  CTCTCCTTTAGTGGTGCCCCATGGCTGCCTGCTTCTCAAAGAGTCTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTTAGTGGTGCCCCATGGCTGCCTGCTTCTCAAAGAGTCTCTCT  850

seq1  AGACTCTCCAAATCACATAAAAATATCAGCTACATAGTAGACTTACCTCA  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGACTCTCCAAATCACAT-AAAATATCAGCTACATAGTAGACTTACCTCA  899

seq1  GTCCAGAAAACAGAAAGCTCCTACATATTTACCCCCTGATTCCTCTATAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGAAAACAGAAAGCTCCTACATATTTACCCCCTGATTCCTCTATAC  949

seq1  TTATATATCATTAAGAACATCAAGATGTATATGTGCTCTCTTAACCACAA  1000
      |||||||||| |||| ||||| |||||||||||||||||||||  |||||
seq2  TTATATATCA-TAAG-ACATC-AGATGTATATGTGCTCTCTTA--CACAA  994

seq1  AATGCGAAGGAAGATGTTTTGCTAGCATGTTTTTGTACTAGGATTATGGT  1050
      |||||||| ||||||| |||||||||||| |||||||||||   ||||  
seq2  AATGCGAA-GAAGATG-TTTGCTAGCATG-TTTTGTACTAG--ATATG--  1037

seq1  TACTTTCTG-ATACTGGCTTTGTTAGGGATTATATTTTATCAACACCCCC  1099
      ||||||||| |||||||||||| || |||||||| |||||||    ||||
seq2  TACTTTCTGAATACTGGCTTTG-TAAGGATTATA-TTTATCA----CCCC  1081

seq1  TTTTCTTGAAACTCTCAAACCCTCAAGACATTGCTCTCACAGAAGGTGAT  1149
        ||||   ||||||| |||||||||||  ||||||||   |||||||||
seq2  CATTCT--GAACTCTC-AACCCTCAAGAACTTGCTCTCCACGAAGGTGAT  1128

seq1  GTTTCAGTCAATTCTGTGTTGCCTATTCAGCATCTATGACTGAA  1193
      ||||||||||| || |||    | ||||   | |||||||||||
seq2  GTTTCAGTCAA-TCGGTG----CCATTC--GAACTATGACTGAA  1165

seq1: chr9_39962087_39963218
seq2: B6Ng01-094N22.g_70_1208 (reverse)

seq1  TTAT-CCCATCAGAAGAGAAAGATTT-CAAGGAGTCATG-AAGC--AACT  45
      |||| ||| |||  |||||||||||| ||||  |||||| ||||  | ||
seq2  TTATCCCCTTCAAGAGAGAAAGATTTCCAAGAGGTCATGAAAGCCAACCT  50

seq1  GTGACTCTAAGTTGCCTCCA-GTTGTGGAAGTACTTCCCCCGA-GAAGCA  93
      |||||||||||||||||||| ||||||||||  |||||||||| ||||| 
seq2  GTGACTCTAAGTTGCCTCCAGGTTGTGGAAGATCTTCCCCCGAGGAAGCC  100

seq1  TAAGTCTTGGTATGACTCAAATCATCCAACTCAACAAAAGAAT-ACATCA  142
        |||||||||||||||| ||||||||||||||  |||||||| ||||||
seq2  ATAGTCTTGGTATGACTC-AATCATCCAACTCACAAAAAGAATAACATCA  149

seq1  AGGTTGGACTTCAAGTTCAATAACAAGCAGTATTATTTCCCTGTCCATAT  192
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGGACTTCAAGTTCAATAACAAGCAGTATTATTTCCCTGTCCATAT  199

seq1  CCTCCACAGACTCAAAAGACAGACTGCAGCCGCTGTAGTCAGCTAGTAAC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACAGACTCAAAAGACAGACTGCAGCCGCTGTAGTCAGCTAGTAAC  249

seq1  AAAACCAAGAATTTGGCTTCATGGGTCCCAAGCATCTCTCTGATGGCTTC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAGAATTTGGCTTCATGGGTCCCAAGCATCTCTCTGATGGCTTC  299

seq1  TGACTTAGGGACAACACTTGAAAAGGTTGAGAGAAATGTATTATACATAA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTAGGGACAACACTTGAAAAGGTTGAGAGAAATGTATTATACATAA  349

seq1  ATAACCAAGCATACTATTATCTTTTATAGGTTATTTCTTTCATAAAATAA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAAGCATACTATTATCTTTTATAGGTTATTTCTTTCATAAAATAA  399

seq1  ACTTGTTGAGGAGGACTTCAGAGAGAAGTTGGCATTCGAGAATTTTAAGA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTTGAGGAGGACTTCAGAGAGAAGTTGGCATTCGAGAATTTTAAGA  449

seq1  ATTCAGTAGTAATTTACTGTCAACTTTTAAACTCGAAAGGCATCAAGTTT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTAGTAATTTACTGTCAACTTTTAAACTCGAAAGGCATCAAGTTT  499

seq1  TGAGCAGAATCAAACTCACACAACAAAAAAAAAACAAAATTTCATCTAGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGAATCAAACTCACACAACAAAAAAAAAACAAAATTTCATCTAGT  549

seq1  AAAGAATAGCTTTCCATAAAATGGAGGCAAAGGACTCGCCACACACAGTT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATAGCTTTCCATAAAATGGAGGCAAAGGACTCGCCACACACAGTT  599

seq1  CTCTAAATCGTAAACAAGTATTTTTGTATCCATAAATATTAACATAACAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAATCGTAAACAAGTATTTTTGTATCCATAAATATTAACATAACAT  649

seq1  GAATGGCATCAATTTATAATTAGCATTTGATTCCTGGGGCATGCTGAAGG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGCATCAATTTATAATTAGCATTTGATTCCTGGGGCATGCTGAAGG  699

seq1  AACGCATTGTTGGACTCACTATTCTTTATGCATGAAAACATACTACAGGC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCATTGTTGGACTCACTATTCTTTATGCATGAAAACATACTACAGGC  749

seq1  CCACAAAGCCAGAAGAGACTCTGGCAGGAGGAACACACAGCTGTTTCCTA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAAGCCAGAAGAGACTCTGGCAGGAGGAACACACAGCTGTTTCCTA  799

seq1  CATACTGGTCATATAATCGTTAATAGAAATAAAAGCAGCTGTTGCAAACA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTGGTCATATAATCGTTAATAGAAATAAAAGCAGCTGTTGCAAACA  849

seq1  GCTGAGGATAATGCAGATCACTACAGATTAAAGACGTAAAGTGGAAACAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGATAATGCAGATCACTACAGATTAAAGACGTAAAGTGGAAACAC  899

seq1  TGACTCTTTCTGGGAAACCCAGGAATCAGGGGAAATTGTTATGGTGAGAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTTTCTGGGAAACCCAGGAATCAGGGGAAATTGTTATGGTGAGAC  949

seq1  CTAGTCCTTGCATAAAAATCAAATTCCTTGGTTCCAGTCATGCTCCACTT  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCCTTGCATAAAAATCAAATTCCTTGGTTCCAGTCATGCTCCACTT  999

seq1  CCTGTTGTCGACAGGACTGGTCCAACCACCAGTCCTCAATAAGCCAGTGA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTGTCGACAGGACTGGTCCAACCACCAGTCCTCAATAAGCCAGTGA  1049

seq1  AAAGAGCCAAATTAAAAGTGGAAAGAACAAAATAAAGATTGATTTGATAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCCAAATTAAAAGTGGAAAGAACAAAATAAAGATTGATTTGATAA  1099

seq1  GGCTACATTGGGAAGAGGAATAAGGAAATCCAATGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACATTGGGAAGAGGAATAAGGAAATCCAATGAATTC  1139