BAC Information

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BAC

Clone NameB6Ng01-095C20
Chromosome9 (Build37)
Map Location 13,341,068 - 13,469,001
singlet/doubletdoublet
Overlap geneLOC100039758, Maml2
Upstream geneLOC100039680, LOC665285, LOC100039729
Downstream geneMtmr2, Cep57, 2810485I05Rik, LOC665329, Sesn3, Endod1, LOC665351, EG547035, Jmjd2d, 0610040D20Rik, Amotl1, EG665374
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095C20.bB6Ng01-095C20.g
ACCDH906188DH906189
length1,1601,194
definitionDH906188|Mus musculus domesticus DNA, BAC clone: B6Ng01-095C20, 5' end.DH906189|Mus musculus domesticus DNA, BAC clone: B6Ng01-095C20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,341,068 - 13,342,251)(13,467,804 - 13,469,001)
sequence
gaattccaagaatgtttgttcggttaaaggagtagcaattgtttctcatc
caggctcttcttcggtgtttgaaaccctctcctgttgctttagtagatta
tttaatgatgaacccaagcatacagcctccatgtttctcttcctagccct
tgtagataacagcagccttttcctgttacgtttcctctcaagatgtttca
cgtgtgtgtttcctttctacccacgctctgtgtttgcccccaaatttcca
ttgccggcccctcccactcatgacttcactctctcctcactcactctgac
ttaaagagataagggacagaaaagaagttgacttcctcaaaaaaggcata
aagttcatacagagggtttaatgctttgaggttttctgtgaaggttcttc
aaccctgcttctgctcctgccataataaaaccaacccccacctctgctgg
tgggacacccccacccccaggccaccaggccatttgtgcctgttgactgg
ttttcccatcagaagttcttaattatgagtcaataaaacagcactctaaa
gtcacacccccagggagggaaggactgcctaagcattgaggtcaagggag
aagcatgggggcggggcaagatttgttgtcttcctagttattatttaggc
aaaaccagactttaaaatatgcatggaaaagcttatagaaactgctaaaa
ttagactttcagattggtgttacaagagaaagtcaactttttaaacatgt
gcttgcttctgagcacacactaggatatcttcactcacttcttttcctaa
acctaaaagatcccagaccagtgaggatccatttttcagacttcccagca
aggattaaagaggaggtattgtagtgaggactccagttatcaagatcata
ttcccaaactagaagcatcagagaaacagcttcacttaacagagccagga
gagctgtgtcacatgagcatagactgagtgtctgtcaagttcagcacaga
gccatgctgagtctgggcaaatttgcctccacggctgtggatcactcatt
accgaaaaggcagtggcaggagcatctatgcaagaaactacctacttgaa
atctaagctgtgcaatttcagtgggaagggacctgcgcaaagctgatgac
atgagttcaa
gaattctctaatcatctcgataactgtggattctgtttgacgtaatatgt
gtgtgtataagccactcactgtggacttgtagtaagcagacacaggtacg
gatcattgtctgagagtgaagagatgagtaagggtgctgggaataaccct
gggtgtggtgtctggagggaagtttctgaagtgatactttgtagacttgg
tttttgttagaagtccaggacattgttgctagacaagggtttgataagca
gtgggatgcaaaggatcttcaatcttaaaactctgaggtgtctggaggag
agaacccttctcagaagaagagtttcagagatctgctacaggtgtctgcg
tcgggttttcttggggttacactgatgtccagagaagctgggacagagta
cacaaggcctggttatcccatcgctcacagtcactccctttcaggcccgc
tgcccgaacccccatcattcatgggctgtggaccatttcgcatcctccct
ttctttttgctcatcatgtagttatcaaatgtgtgctgtgttccaagtat
tgagctaggatttggaattctcattaaattataaatgccattgaaagaaa
aaccttaattttggtgcacagtgggtttttcaatacgaatagttttaagt
aagaatagtctaaaaagggtatgtctaacagccggagagagcagcgatat
aaactgagtgctggaaagaggttagtcaagaaaaataaaagtcctttggc
aagtttgtctatttacagttttgttcagagttgagtgtggctgtgttctt
tggaaatgaaaagtgttggggaaaaaaaagaaaaaggtgtcagtgtccct
gagatgagtctgtggttttccttttggtcttcatctgctataaagacctt
catggccaggttatttgattgggcaggtgtgtcgtccctggttagcaccc
ttcttgatatatgggcacctcaggacagagcactaggctgaggccctggc
ttcgggtacaggaaggtgattgaaacttcaccccatcaacattttctttc
ttgtccattattacctaggttcatgatacacagccctatgctttcttcaa
gcaagcctgtagcaggttggggagaaaggactgggaggaagttggccttg
gggagcaagcctttcggattgctcagagaacctcgtggtggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_13341068_13342251
seq2: B6Ng01-095C20.b_47_1206

seq1  GAATTCCAAGAATGTTTGTTCGGTTAAAGGAGTAGCAATTGTTTCTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAATGTTTGTTCGGTTAAAGGAGTAGCAATTGTTTCTCATC  50

seq1  CAGGCTCTTCTTCGGTGTTTGAAACCCTCTCCTGTTGCTTTAGTAGATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTCTTCTTCGGTGTTTGAAACCCTCTCCTGTTGCTTTAGTAGATTA  100

seq1  TTTAATGATGAACCCAAGCATACAGCCTCCATGTTTCTCTTCCTAGCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGATGAACCCAAGCATACAGCCTCCATGTTTCTCTTCCTAGCCCT  150

seq1  TGTAGATAACAGCAGCCTTTTCCTGTTACGTTTCCTCTCAAGATGTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATAACAGCAGCCTTTTCCTGTTACGTTTCCTCTCAAGATGTTTCA  200

seq1  CGTGTGTGTTTCCTTTCTACCCACGCTCTGTGTTTGCCCCCAAATTTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGTGTTTCCTTTCTACCCACGCTCTGTGTTTGCCCCCAAATTTCCA  250

seq1  TTGCCGGCCCCTCCCACTCATGACTTCACTCTCTCCTCACTCACTCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCGGCCCCTCCCACTCATGACTTCACTCTCTCCTCACTCACTCTGAC  300

seq1  TTAAAGAGATAAGGGACAGAAAAGAAGTTGACTTCCTCAAAAAAGGCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGATAAGGGACAGAAAAGAAGTTGACTTCCTCAAAAAAGGCATA  350

seq1  AAGTTCATACAGAGGGTTTAATGCTTTGAGGTTTTCTGTGAAGGTTCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCATACAGAGGGTTTAATGCTTTGAGGTTTTCTGTGAAGGTTCTTC  400

seq1  AACCCTGCTTCTGCTCCTGCCATAATAAAACCAACCCCCACCTCTGCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGCTTCTGCTCCTGCCATAATAAAACCAACCCCCACCTCTGCTGG  450

seq1  TGGGACACCCCCACCCCCAGGCCACCAGGCCATTTGTGCCTGTTGACTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACACCCCCACCCCCAGGCCACCAGGCCATTTGTGCCTGTTGACTGG  500

seq1  TTTTCCCATCAGAAGTTCTTAATTATGAGTCAATAAAACAGCACTCTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCATCAGAAGTTCTTAATTATGAGTCAATAAAACAGCACTCTAAA  550

seq1  GTCACACCCCCAGGGAGGGAAGGACTGCCTAAGCATTGAGGTCAAGGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACCCCCAGGGAGGGAAGGACTGCCTAAGCATTGAGGTCAAGGGAG  600

seq1  AAGCATGGGGGCGGGGCAAGATTTGTTGTCTTCCTAGTTATTATTTAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGGGGGCGGGGCAAGATTTGTTGTCTTCCTAGTTATTATTTAGGC  650

seq1  AAAACCAGACTTTAAAATATGCATGGAAAAGCTTATAGAAACTGCTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAGACTTTAAAATATGCATGGAAAAGCTTATAGAAACTGCTAAAA  700

seq1  TTAGACTTTCAGATTGGTGTTACAAGAGAAAGTCAACTTTTTAAACATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACTTTCAGATTGGTGTTACAAGAGAAAGTCAACTTTTTAAACATGT  750

seq1  GCTTGCTTCTGAGCACACACTAGGATATCTTCACTCACTTCTTTTCCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTTCTGAGCACACACTAGGATATCTTCACTCACTTCTTTTCCTAA  800

seq1  ACCTAAAAGATCCCAGACCAGTGAGGATCCATTTTTCAGACTTCCCAGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAAAGATCCCAGACCAGTGAGGATCCATTTTTCAGACTTCCCAGCA  850

seq1  AGGATTAAAGAGGAGGTATTGTAGTGAGGACTCCAGTTATCAAGATCATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAAAGAGGAGGTATTGTAGTGAGGACTCCAGTTATCAAGATCATA  900

seq1  TTCCCAAACTAGAAGCATCAGAGAAACAGCTTCACTTAAACAGAGGCCAG  950
      ||||||||||||||||||||||||||||||||||||| |||||| |||| 
seq2  TTCCCAAACTAGAAGCATCAGAGAAACAGCTTCACTT-AACAGA-GCCA-  947

seq1  GGAGAGCTGTGTCACATGAGCATAAGACTGAGTGTCTGTCAAGTTCAGCA  1000
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  GGAGAGCTGTGTCACATGAGCAT-AGACTGAGTGTCTGTCAAGTTCAGC-  995

seq1  ACAGGAGCCATGCTGGAGTCTGGGCAAATTTTGCTCCACGGCCTGTGGGA  1050
      ||| |||||||||| ||||||||||||||||  |||||||| ||||||  
seq2  ACA-GAGCCATGCT-GAGTCTGGGCAAATTTGCCTCCACGG-CTGTGG--  1040

seq1  ATCAACTCATTACCGAAAAAGGCAGTGGCAGGAGCCATTCCTATGCAAGA  1100
      ||| ||||||||||| |||||||||||||||||| |||  ||||||||||
seq2  ATC-ACTCATTACCG-AAAAGGCAGTGGCAGGAG-CAT--CTATGCAAGA  1085

seq1  CACTA-CTACTTGAAAATTCTTAGGCCTGTGAAATGTCTCAGTGAGAAAG  1149
       |||| ||||||||||  ||| ||  ||||| ||  | |||||| | |||
seq2  AACTACCTACTTGAAA--TCTAAG--CTGTGCAA--TTTCAGTG-GGAAG  1128

seq1  GGAGCTTGCCGCCAAGTCTGATGACATGAGTTCAA  1184
      ||| ||   ||| ||| ||||||||||||||||||
seq2  GGACCT--GCGCAAAG-CTGATGACATGAGTTCAA  1160

seq1: chr9_13467804_13469001
seq2: B6Ng01-095C20.g_66_1259 (reverse)

seq1  TCTCCACACAGAGGTCTCTCTGAGCAAATCAGAAAGGGGCTTTGCTTCCC  50
      |||||||   ||||| ||||||||| |||| ||||||    ||||| |||
seq2  TCTCCACCACGAGGT-TCTCTGAGC-AATCCGAAAGG---CTTGCTCCCC  45

seq1  AAGCGCAGACTTCCCCTCCAGTCTCTGTCT-CCCAGCCTGGCTACCAGGC  99
      ||| ||  |||||| | |||||| || ||| |||| ||| |||| |||||
seq2  AAG-GCCAACTTCCTC-CCAGTC-CTTTCTCCCCAACCT-GCTA-CAGGC  90

seq1  TTGCTTGAAG-AAGCATA-GGCTGTGTATCATTGAAACTAGTTATTAAT-  146
      |||||||||| ||||||| |||||||||||| |||| |||| || |||| 
seq2  TTGCTTGAAGAAAGCATAGGGCTGTGTATCA-TGAACCTAGGTAATAATG  139

seq1  GACAAGAAAG-AAATGTTGATGGGGTGAAGGTCTCAATCACCTTCCTGTA  195
      |||||||||| |||||||||||||||||| || |||||||||||||||||
seq2  GACAAGAAAGAAAATGTTGATGGGGTGAA-GTTTCAATCACCTTCCTGTA  188

seq1  CCCGAAGCCAGGGCCTCAGCCTAGTGCTTCTGTCCTGAGGGTGCCCATAT  245
      ||||||||||||||||||||||||||| |||||||||| |||||||||||
seq2  CCCGAAGCCAGGGCCTCAGCCTAGTGC-TCTGTCCTGA-GGTGCCCATAT  236

seq1  ATCAAGAGGGGTGCTAACCAGGGACGACACACCTG-CCAATCAAAT-ACC  293
      ||||||| ||||||||||||||||||||||||||| |||||||||| |||
seq2  ATCAAGAAGGGTGCTAACCAGGGACGACACACCTGCCCAATCAAATAACC  286

seq1  TGG-CATGAAGGTCTTTTATAGCAGATGAAGACCAAAAGGAAAA-CACAG  341
      ||| |||||||||| ||||||||||||||||||||||||||||| |||||
seq2  TGGCCATGAAGGTC-TTTATAGCAGATGAAGACCAAAAGGAAAACCACAG  335

seq1  ACTCATCTTCAGGGACACTGACACCTTTTTCTTTTTTTTTCCCAACACTT  391
      ||||||| ||||||||||||||||||||||||||||||| ||||||||||
seq2  ACTCATC-TCAGGGACACTGACACCTTTTTCTTTTTTTTCCCCAACACTT  384

seq1  TTCATTTCCAAAGAACACAGCCACACTCAACTCTGAACAAAACTGTAAAT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCCAAAGAACACAGCCACACTCAACTCTGAACAAAACTGTAAAT  434

seq1  AGACAAACTTGCCAAAGGACTTTTATTTTTCTTGACTAACCTCTTTCCAG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAACTTGCCAAAGGACTTTTATTTTTCTTGACTAACCTCTTTCCAG  484

seq1  CACTCAG-TTATATCGCTGCTCTCTCCGGCTGTTAGACATACCCTTTTTA  540
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGTTTATATCGCTGCTCTCTCCGGCTGTTAGACATACCCTTTTTA  534

seq1  GACTATTCTTACTT-AAACTATTCGTATTG-AAAACCCACTGTGCACCAA  588
      |||||||||||||| ||||||||||||||| |||||||||||||||||||
seq2  GACTATTCTTACTTAAAACTATTCGTATTGAAAAACCCACTGTGCACCAA  584

seq1  AATTAAGGTTTTTCTTTCAATGGCATTTATAATTTAATGAGAATTCCAAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGGTTTTTCTTTCAATGGCATTTATAATTTAATGAGAATTCCAAA  634

seq1  TCCTAGCTCAATACTTGGAACACAGCACACATTTGATAACTACATGATGA  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCTCAATACTTGGAACACAGCACACATTTGATAACTACATGATGA  684

seq1  GCAAAAAGAAAGGGAGGATGCGAAATGGTCCACAGCCCATGAATGATGGG  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAGAAAGGGAGGATGCGAAATGGTCCACAGCCCATGAATGATGGG  734

seq1  GGTTCGGGCAGCGGGCCTGAAAGGGAGTGACTGTGAGCGATGGGATAACC  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCGGGCAGCGGGCCTGAAAGGGAGTGACTGTGAGCGATGGGATAACC  784

seq1  AGGCCTTGTGTACTCTGTCCCAGCTTCTCTGGACATCAGTGTAACCCCAA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTTGTGTACTCTGTCCCAGCTTCTCTGGACATCAGTGTAACCCCAA  834

seq1  GAAAACCCGACGCAGACACCTGTAGCAGATCTCTGAAACTCTTCTTCTGA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACCCGACGCAGACACCTGTAGCAGATCTCTGAAACTCTTCTTCTGA  884

seq1  GAAGGGTTCTCTCCTCCAGACACCTCAGAGTTTTAAGATTGAAGATCCTT  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGTTCTCTCCTCCAGACACCTCAGAGTTTTAAGATTGAAGATCCTT  934

seq1  TGCATCCCACTGCTTATCAAACCCTTGTCTAGCAACAATGTCCTGGACTT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCCACTGCTTATCAAACCCTTGTCTAGCAACAATGTCCTGGACTT  984

seq1  CTAACAAAAACCAAGTCTACAAAGTATCACTTCAGAAACTTCCCTCCAGA  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAAAACCAAGTCTACAAAGTATCACTTCAGAAACTTCCCTCCAGA  1034

seq1  CACCACACCCAGGGTTATTCCCAGCACCCTTACTCATCTCTTCACTCTCA  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACCCAGGGTTATTCCCAGCACCCTTACTCATCTCTTCACTCTCA  1084

seq1  GACAATGATCCGTACCTGTGTCTGCTTACTACAAGTCCACAGTGAGTGGC  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGATCCGTACCTGTGTCTGCTTACTACAAGTCCACAGTGAGTGGC  1134

seq1  TTATACACACACATATTACGTCAAACAGAATCCACAGTTATCGAGATGAT  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACACACACATATTACGTCAAACAGAATCCACAGTTATCGAGATGAT  1184

seq1  TAGAGAATTC  1198
      ||||||||||
seq2  TAGAGAATTC  1194