BAC Information

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BAC

Clone NameB6Ng01-095P21
Chromosome9 (Build37)
Map Location 105,444,142 - 105,621,776
singlet/doubletdoublet
Overlap geneEG434434, LOC664981, Pik3r4
Upstream geneCpne4, Mrpl3, Nudt16, 1700080E11Rik, Nek11, Aste1, Atp2c1
Downstream geneE330026B02Rik, EG665033, 1110001D15Rik, LOC669311, 6230410P16Rik, Wdr82, Ppm1m, Twf2, Tlr9, Alas1, Wdr51a, Dusp7, Rpl29, Acy1, Abhd14a, Abhd14b, Pcbp4, Parp3, Rrp9, Iqcf1, Iqcf5, Iqcf3, Iqcf4, LOC100041096, Grm2, Tex264, Rad54l2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095P21.bB6Ng01-095P21.g
ACCDH906779DH906780
length8781,107
definitionDH906779|Mus musculus domesticus DNA, BAC clone: B6Ng01-095P21, 5' end.DH906780|Mus musculus domesticus DNA, BAC clone: B6Ng01-095P21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,444,142 - 105,444,956)(105,620,680 - 105,621,776)
sequence
gaattctatcttgagaggtgttgaatatttctgtattcctgtaatactcc
tcctcctccttctctctggaagcctctaacttggtacctgacaacacagt
tgaatctcaataaacattttgtgactcttgtttttatttcgacacacaaa
atatctttaatggcaagtctcgttgttttggctacctggcatctataatt
tctgccagtgatgtagaacctgtctcttactacagacattgcaatgccag
tgtccagcttggcaccagttctttgaggaaggtagttgatggggtatgga
gtcagcaatgatgtcaaagtttatttatgtttggtaattcttctgtctat
aactctatgctattctaaaaccaaaagccgttggcttctggtaattaact
cctgctgctcagcagcaggggataaagaagaaaagacagttaattggtag
ggcatctttctccctggctctgaaaacttgttagttcttcatgaaccaga
gagaagagaagagaagagaagagaagagaagagaagagaagagaagagaa
gagaagagaagagaagagaagagaagagaagagaagagaagagaagagaa
gagaagagaagagaagatcttttacacaggctataggcacagatatacac
acacacacacacactcatacagacacacactctggtcaggcctgaccacc
attctcaatgactctgtaagtgtccatgcatacttacatatacacaccta
cacctacacatgtatgtatgtatatatatatatatatatatacatatata
gagacaaacagacatatacatatattcatttggtggatggaacagaagct
tcaatgagcaagctccaatgcagaaaaa
gaattcagagtcctattaactagtgttttctctctggaaccccgctggat
cacctcttagatctgccatgggtttggttactggacatatggtccatttt
ttcccactttcctgagaattagcaggtcccttgaccctgaaaatatgtcc
cctttcattctgttattttgctgacctttgaccttcccctgcagagctct
ctgctctgtatattgaaacatctatcatccagtataacgacagagtccct
gagtttacttcgtatggtatttattttataggtacaacctctctttgatc
ttctcctttctgggaaggtatcttcttgattctatttttaatttatgtcc
catagttgacctttgaaaagttggttgctaaaatctgactgttctttctc
tgtagtgtactgttcttgtctcatgactgaagcatctcatctctctgagg
atatgagtgaatatttttaggtcctctttgttcaacccagtttcctccag
gtttgccttctgtcttgacattcagctcccatggatctcaagaacagcag
tgcatttacactgagcattgagtacaaagagtctggtaggaaaccctgaa
gtcaggaccgatttgccagttatgaatttcactgatggctatctgctgga
cctgtgcttggcaacccttcactattggtgttctctcttctttgatttcc
ctctggaaacaccttctacccttttttagagggttcatatcctgatgcca
gtttagaggacactggcaatgagagcagaagctcagactcaatgtgcata
ttttggttggttctcctggctcagtgtggtaatatttgtcttcagctctg
ccgagatcctactcctgatttacctttgctttttctagtggggaaagtgt
ctaactacctggtgaaatttccccactagtcctcgtatttagctcttcac
ttctgcttctggggacctctggccccgacaaagctgagcttctgggaatg
tgtgaatacaaacacactgggttctgggtgcatctgctgctgggtcaagg
gctcagactccctcggtcttgccagggtcggcttctcacccacacactaa
tgcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_105444142_105444956
seq2: B6Ng01-095P21.b_47_856

seq1  GAATTCTATCTTGAGAGGTGTTGAATATTTCTGTATTCCTGTAATACTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCTTGAGAGGTGTTGAATATTTCTGTATTCCTGTAATACTCC  50

seq1  TCCTCCTCCTTCTCTCTGGAAGCCTCTAACTTGGTACCTGACAACACAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTTCTCTCTGGAAGCCTCTAACTTGGTACCTGACAACACAGT  100

seq1  TGAATCTCAATAAACATTTTGTGACTCTTGTTTTTATTTCGACACACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTCAATAAACATTTTGTGACTCTTGTTTTTATTTCGACACACAAA  150

seq1  ATATCTTTAATGGCAAGTCTCGTTGTTTTGGCTACCTGGCATCTATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTAATGGCAAGTCTCGTTGTTTTGGCTACCTGGCATCTATAATT  200

seq1  TCTGCCAGTGATGTAGAACCTGTCTCTTACTACAGACATTGCAATGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAGTGATGTAGAACCTGTCTCTTACTACAGACATTGCAATGCCAG  250

seq1  TGTCCAGCTTGGCACCAGTTCTTTGAGGAAGGTAGTTGATGGGGTATGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGCTTGGCACCAGTTCTTTGAGGAAGGTAGTTGATGGGGTATGGA  300

seq1  GTCAGCAATGATGTCAAAGTTTATTTATGTTTGGTAATTCTTCTGTCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCAATGATGTCAAAGTTTATTTATGTTTGGTAATTCTTCTGTCTAT  350

seq1  AACTCTATGCTATTCTAAAACCAAAAGCCGTTGGCTTCTGGTAATTAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTATGCTATTCTAAAACCAAAAGCCGTTGGCTTCTGGTAATTAACT  400

seq1  CCTGCTGCTCAGCAGCAGGGGATAAAGAAGAAAAGACAGTTAATTGGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGCTCAGCAGCAGGGGATAAAGAAGAAAAGACAGTTAATTGGTAG  450

seq1  GGCATCTTTCTCCCTGGCTCTGAAAACTTGTTAGTTCTTCATGAACCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGCATCTTTCTCCCTGGCTCTGAAAACTTGTTAGTTCTTCATGAACCAG-  499

seq1  GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA  550
          ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ----AGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA  545

seq1  GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAAGAGAA  595

seq1  GAGAAGAGAAGAGAAGAGAAGATCTTTTACACAGGCTATAGGCACAGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAGAAGAGAAGAGAAGATCTTTTACACAGGCTATAGGCACAGATA  645

seq1  TACACACACACACACACACTCATACAGACACACACTCTGGTCAGGCCTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACACACACACACACTCATACAGACACACACTCTGGTCAGGCCTGA  695

seq1  CCACCATTCTCAATGACTCTGTAAGTGTCCATGCATACTTACATATACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATTCTCAATGACTCTGTAAGTGTCCATGCATACTTACATATACAC  745

seq1  ACCTACACCTACACATGTATGTATGTATATATATATATATATATATACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTACACCTACACATGTATGTATGTATATATATATATATATATATACAT  795

seq1  ATATAGAGACAAACA  815
      |||||||||||||||
seq2  ATATAGAGACAAACA  810

seq1: chr9_105620680_105621776
seq2: B6Ng01-095P21.g_81_1175 (reverse)

seq1  AGATGCATAGGTGT---TGTGTGGAGCCGA-CCTGGCAGAGCCGA-GGAG  45
      ||||||||  ||||    ||| | |||||| |||||||   |||| ||||
seq2  AGATGCATTAGTGTGTGGGTGAGAAGCCGACCCTGGCAAGACCGAGGGAG  50

seq1  TCTGAGCCC-TGAGCCAGCAGCAGATGCACCCAAGAACCAGTGTGTTTGG  94
      ||||||||| ||| |||||||||||||||||||  | |||||||||||| 
seq2  TCTGAGCCCTTGACCCAGCAGCAGATGCACCCAGAACCCAGTGTGTTTGT  100

seq1  TATCACACATTCCCAGAAAGCTCAGGCTTTGTCGGGGCCAGAGGTCCCCA  144
        |||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  ATTCACACATTCCCAG-AAGCTCA-GCTTTGTCGGGGCCAGAGGTCCCCA  148

seq1  GAAGCAGAAGTGAAGAGGCTAAATACGGAGGACTAGTGGGGAAAATTTCA  194
      |||||||||||||||| ||||||||| |||||||||||||| ||||||||
seq2  GAAGCAGAAGTGAAGA-GCTAAATAC-GAGGACTAGTGGGG-AAATTTCA  195

seq1  CCAGGTAGTTAGACACTTTTCCCCACTAGGAAAAAGCAAAGGTAAATCAG  244
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  CCAGGTAGTTAGACAC-TTTCCCCACTA-GAAAAAGCAAAGGTAAATCAG  243

seq1  GGGTAGGATTCTCGGCAGAGCTGAAGACAAATATTACCACACTGAGCCAG  294
      | |||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGA-TCTCGGCAGAGCTGAAGACAAATATTACCACACTGAGCCAG  292

seq1  GAGAACCAACCAAAATATGCACATTGAGTCTGAGCTTCTGCTCTCATTGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACCAACCAAAATATGCACATTGAGTCTGAGCTTCTGCTCTCATTGC  342

seq1  CAGTGTCCTCTAAACTGGCATCAGGATATGAACCCTCTAAAAAAGGGTAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCCTCTAAACTGGCATCAGGATATGAACCCTCTAAAAAAGGGTAG  392

seq1  AAGGTGTTTCCAGAGGGAAATCAAAGAAGAGAGAACACCAATAGTGAAGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTTTCCAGAGGGAAATCAAAGAAGAGAGAACACCAATAGTGAAGG  442

seq1  GTTGCCAAGCACAGGTCCAGCAGATAGCCATCAGTGAAATTCATAACTGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCAAGCACAGGTCCAGCAGATAGCCATCAGTGAAATTCATAACTGG  492

seq1  CAAATCGGTCCTGACTTCAGGGTTTCCTACCAGACTCTTTGTACTCAATG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCGGTCCTGACTTCAGGGTTTCCTACCAGACTCTTTGTACTCAATG  542

seq1  CTCAGTGTAAATGCACTGCTGTTCTTGAGATCCATGGGAGCTGAATGTCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGTAAATGCACTGCTGTTCTTGAGATCCATGGGAGCTGAATGTCA  592

seq1  AGACAGAAGGCAAACCTGGAGGAAACTGGGTTGAACAAAGAGGACCTAAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAGGCAAACCTGGAGGAAACTGGGTTGAACAAAGAGGACCTAAA  642

seq1  AATATTCACTCATATCCTCAGAGAGATGAGATGCTTCAGTCATGAGACAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCACTCATATCCTCAGAGAGATGAGATGCTTCAGTCATGAGACAA  692

seq1  GAACAGTACACTACAGAGAAAGAACAGTCAGATTTTAGCAACCAACTTTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGTACACTACAGAGAAAGAACAGTCAGATTTTAGCAACCAACTTTT  742

seq1  CAAAGGTCAACTATGGGACATAAATTAAAAATAGAATCAAGAAGATACCT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTCAACTATGGGACATAAATTAAAAATAGAATCAAGAAGATACCT  792

seq1  TCCCAGAAAGGAGAAGATCAAAGAGAGGTTGTACCTATAAAATAAATACC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAAAGGAGAAGATCAAAGAGAGGTTGTACCTATAAAATAAATACC  842

seq1  ATACGAAGTAAACTCAGGGACTCTGTCGTTATACTGGATGATAGATGTTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACGAAGTAAACTCAGGGACTCTGTCGTTATACTGGATGATAGATGTTT  892

seq1  CAATATACAGAGCAGAGAGCTCTGCAGGGGAAGGTCAAAGGTCAGCAAAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATACAGAGCAGAGAGCTCTGCAGGGGAAGGTCAAAGGTCAGCAAAA  942

seq1  TAACAGAATGAAAGGGGACATATTTTCAGGGTCAAGGGACCTGCTAATTC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAATGAAAGGGGACATATTTTCAGGGTCAAGGGACCTGCTAATTC  992

seq1  TCAGGAAAGTGGGAAAAAATGGACCATATGTCCAGTAACCAAACCCATGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAAGTGGGAAAAAATGGACCATATGTCCAGTAACCAAACCCATGG  1042

seq1  CAGATCTAAGAGGTGATCCAGCGGGGTTCCAGAGAGAAAACACTAGTTAA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTAAGAGGTGATCCAGCGGGGTTCCAGAGAGAAAACACTAGTTAA  1092

seq1  TAG  1097
      |||
seq2  TAG  1095