BAC Information

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BAC

Clone NameB6Ng01-098C09
Chromosome9 (Build37)
Map Location 19,612,794 - 19,613,888
singlet/doubletsinglet
Overlap geneOlfr859
Upstream geneOlfr828, Olfr829, Olfr830, Olfr831-ps1, Olfr832, GA_x5J8B7W6RL5-13870817-13871726, Olfr834, Olfr835, Olfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1, GA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697, Olfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849, Olfr850, Olfr851, Olfr852-ps1, Olfr853, Olfr854, Olfr855, Zfp75, EG624341, LOC665751, Olfr857, Olfr858-ps1, Olfr58
Downstream geneOlfr860, GA_x5J8B7W6RL5-13004417-13003354, Olfr862, Olfr77, EG665823, Olfr863-ps1, Olfr864-ps1, Olfr865-ps1, Olfr866, Olfr867, Olfr868, Olfr869, Olfr870, Olfr871, Olfr872, Olfr39, Olfr873, Olfr18, Zfp560, 4921534A09Rik, EG624824, Zfp26, Zfp426, 5730601F06Rik, 7030419G21Rik, LOC100041205, 2210010B09Rik, 5730577I03Rik, Fbxl12, Ubl5, Pin1, Olfm2, Col5a3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098C09.bB6Ng01-098C09.g
ACCDH908322DH908323
length1,1381,088
definitionDH908322|Mus musculus domesticus DNA, BAC clone: B6Ng01-098C09, 5' end.DH908323|Mus musculus domesticus DNA, BAC clone: B6Ng01-098C09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcgtattcgttccatgaactgtggagtgagggctattatggttg
gaaaggctaaatggaagcctttagagttgtccttgccaaagaaaatagtg
aaacaaaacagtatcatattcctggaggaattgcagaaattactgccact
accaaggacttgaaagatgcaggggtcatggttcccaccacatctacctt
taactctcctatctggccagtgcagaagacagatggatcatggaaaatta
cagtagactattgaaaactaaatcaggtagtaactgtaatttcagctgct
gaaccagatgtagtttcataacttgaacaaattaacacatctcctagcac
ctggaatgtagctattgatctggcaaatgccttcttctccgtacctgtcc
ataaggaccacaagaagcaatttgctctcagttggcaaggccaacagtat
accttcacagttctgcctcaaggatatattaactctcctgccctgtgtca
taacttagttagaagggatcttgattgtttggctcttccacagaatatca
cattggtacactatattgatgacattatgctgattggaccaagtcagtag
aaagtagcaaccactttggactcattggtaacacatatgcatatctgagg
atggaaaataaatacaataaaaattcaaggaccatctatctcagtgaaat
tcttaggagtccagggtgtggagcatgcagagatattcctttctaaggtg
aaagataagttattgcacctggccccttctataaccaagaaagaagcaca
atgtttagtgggtttatttggattctggagacagcacattcctcacttgg
gtgtgttacttaggcctatttaccaagtgactcagaagctgctagctttg
tttggggcttggaagaggagaaggcttttcaacatgtccaggctgatgtg
caggctgctctaccattatgatcagcagacccaatggtacttgaggtgtc
tgtggctgaaagagatgttgtttggagcttctggcagcccctgtaggtga
atcaagaagagaccttttgggattttgagaaagctctaccatcatcttgc
atatccactatttctcctttggaaaacagatcttggct
gaattcattctccttggactctcagaggaccctgaactgcagttcatctt
atttgcactattcctgctcatatatctgctcactgtgcttggaaatgttc
tcatcatcttggccatcagctgtgattcccacctccacagcccaatgtac
ttcttcctctacaacctttcattggctgacatgggcttcagcagcaccac
catccccaagatgctgataaacttgcatgcccacaacagatccataactt
atgctgaatgcctaactcaggtatctttctttattctttttgggtgtatg
gacagtattctactggcagtgatggcgtatgacagatgggtggccatttg
tcaccctctacactaccaagtcattctgaatccttgtcggtgtagatatt
tggttgtaatgtcattttgtatcagtctcattgattcacaggtgcactgc
tttatggtgtcacaactaacattttgtactaatataaaaatccctcattt
cttctgtgatgttccagaacttgtaaaacttgcttgttctaacactacta
tcaatgacatagtcatgtttcttttaagcatcattactggtttcctccct
gcctcaggaatattttactcctactataaaattacttcttctatttttag
agttccatcactgttagggaaatataaagccttctctacctgtggatctc
acctgtcagttgtttgcctattttatggaacaggtataggagtctacctc
agttcaacagtttctagttcttccaaggaaagtatggtggcttcggtaat
gtatacaatggtggttcccatgatgaaccccttcatttacagcctgagga
acagggacatcaagaaagccctctggaaaattgtctgtaagataacataa
tttaactaccttcatgatccctttatatattgtttttttaactgagtcac
ataactaattgtggggcattaaaatgaagcagttctatatttctgacata
agtgatcaaaaattacttaatacatatgataaatccaggtctatcttgat
gcactatccacttacattgtagtttcactatgttctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_19612794_19613888
seq2: B6Ng01-098C09.g_68_1155

seq1  GAATTCATTCTCCTTGGACTCTCAGAGGACCCTGAACTGCAGTTCATCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTCCTTGGACTCTCAGAGGACCCTGAACTGCAGTTCATCTT  50

seq1  ATTTGCACTATTCCTGCTCATATATCTGCTCACTGTGCTTGGAAATGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCACTATTCCTGCTCATATATCTGCTCACTGTGCTTGGAAATGTTC  100

seq1  TCATCATCTTGGCCATCAGCTGTGATTCCCACCTCCACAGCCCAATGTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCATCTTGGCCATCAGCTGTGATTCCCACCTCCACAGCCCAATGTAC  150

seq1  TTCTTCCTCTACAACCTTTCATTGGCTGACATGGGCTTCAGCAGCACCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTCTACAACCTTTCATTGGCTGACATGGGCTTCAGCAGCACCAC  200

seq1  CATCCCCAAGATGCTGATAAACTTGCATGCCCACAACAGATCCATAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCAAGATGCTGATAAACTTGCATGCCCACAACAGATCCATAACTT  250

seq1  ATGCTGAATGCCTAACTCAGGTATCTTTCTTTATTCTTTTTGGGTGTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAATGCCTAACTCAGGTATCTTTCTTTATTCTTTTTGGGTGTATG  300

seq1  GACAGTATTCTACTGGCAGTGATGGCGTATGACAGATGGGTGGCCATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTATTCTACTGGCAGTGATGGCGTATGACAGATGGGTGGCCATTTG  350

seq1  TCACCCTCTACACTACCAAGTCATTCTGAATCCTTGTCGGTGTAGATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCTCTACACTACCAAGTCATTCTGAATCCTTGTCGGTGTAGATATT  400

seq1  TGGTTGTAATGTCATTTTGTATCAGTCTCATTGATTCACAGGTGCACTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTAATGTCATTTTGTATCAGTCTCATTGATTCACAGGTGCACTGC  450

seq1  TTTATGGTGTCACAACTAACATTTTGTACTAATATAAAAATCCCTCATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGTGTCACAACTAACATTTTGTACTAATATAAAAATCCCTCATTT  500

seq1  CTTCTGTGATGTTCCAGAACTTGTAAAACTTGCTTGTTCTAACACTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTGATGTTCCAGAACTTGTAAAACTTGCTTGTTCTAACACTACTA  550

seq1  TCAATGACATAGTCATGTTTCTTTTAAGCATCATTACTGGTTTCCTCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGACATAGTCATGTTTCTTTTAAGCATCATTACTGGTTTCCTCCCT  600

seq1  GCCTCAGGAATATTTTACTCCTACTATAAAATTACTTCTTCTATTTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAGGAATATTTTACTCCTACTATAAAATTACTTCTTCTATTTTTAG  650

seq1  AGTTCCATCACTGTTAGGGAAATATAAAGCCTTCTCTACCTGTGGATCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCATCACTGTTAGGGAAATATAAAGCCTTCTCTACCTGTGGATCTC  700

seq1  ACCTGTCAGTTGTTTGCCTATTTTATGGAACAGGTATAGGAGTCTACCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCAGTTGTTTGCCTATTTTATGGAACAGGTATAGGAGTCTACCTC  750

seq1  AGTTCAACAGTTTCTAGTTCTTCCAAGGAAAGTATGGTGGCTTCGGTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAACAGTTTCTAGTTCTTCCAAGGAAAGTATGGTGGCTTCGGTAAT  800

seq1  GTATACAATGGTGGTTCCCATGATGAACCCCTTCATTTACAGCCTGAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATACAATGGTGGTTCCCATGATGAACCCCTTCATTTACAGCCTGAGGA  850

seq1  ACAGGGACATCAAGAAAGCCCTCTGGAAAATTGTCTGTAAGATAACATAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGACATCAAGAAAGCCCTCTGGAAAATTGTCTGTAAGATAACATAA  900

seq1  TTTAACTACCTTCATGATCCCTTTATATATTGATTTTTTTAACTGAGTCA  950
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TTTAACTACCTTCATGATCCCTTTATATATTG-TTTTTTTAACTGAGTCA  949

seq1  CATAACTAATTGTGGTGGCATTTAAAATGAAGCAGTTCTAAATATTTCTG  1000
      ||||||||||||||| |||| ||||||||||||||||||  |||||||||
seq2  CATAACTAATTGTGG-GGCA-TTAAAATGAAGCAGTTCT--ATATTTCTG  995

seq1  ACCATAAGTGATCAAAAATTAACTTATACATATGATAAATCCAGGTCTAT  1050
      | |||||||||||||||||||  | |||||||||||||||||||||||||
seq2  A-CATAAGTGATCAAAAATTACTTAATACATATGATAAATCCAGGTCTAT  1044

seq1  CTTGATGCACTTATCCAACTTACA-TGTAGTTTCACTATGTCCTGA  1095
      |||||||||| ||||| ||||||| |||||||||||||||| ||||
seq2  CTTGATGCAC-TATCC-ACTTACATTGTAGTTTCACTATGTTCTGA  1088