BAC Information

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BAC

Clone NameB6Ng01-099M01
Chromosome9 (Build37)
Map Location 109,139,946 - 109,140,930
singlet/doubletsinglet
Overlap genenone
Upstream geneDag1, Nicn1, EG434437, Tcta, Rhoa, Gpx1, Usp4, LOC623859, 1700102P08Rik, Ccdc36, BC048562, Klhdc8b, LOC100042228, Ccdc71, Lamb2, Usp19, Qars, Qrich1, Impdh2, 4733401H18Rik, Dalrd3, Wdr6, 4933406E20Rik, Arih2, ENSMUSG00000074075, Slc25a20, Prkar2a, Ihpk2, Nckipsd, Celsr3, Slc26a6, LOC100038959, Tmem89, Uqcrc1, Col7a1, Pfkfb4, Scotin, Trex1, 6620401K05Rik, Ccdc72, Ccdc51, EG665413, Plxnb1, E330009P21Rik, Fbxw13, Fbxw12
Downstream geneFbxw14, LOC668758, EG382156, Fbxw16, Fbxw19, LOC635668, Fbxw15, EG382106, E330001B16Rik, C85627, EG382109, 1700124P09Rik, Spink8, 3000002C10Rik, Nme6, Camp, Cdc25a, LOC100043782, Mtap4, LOC100049540, Dhx30, Smarcc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-099M01.bB6Ng01-099M01.g
ACCDH909460DH909461
length9881,142
definitionDH909460|Mus musculus domesticus DNA, BAC clone: B6Ng01-099M01, 5' end.DH909461|Mus musculus domesticus DNA, BAC clone: B6Ng01-099M01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgaggagtttaggttggcctcaaacatgaagtctcttgcctg
cagaagccaggagagggcatttgacctcctggtactgaggttacagagag
ttgtgagcccccacatgggtactgaaaaatcaaacccaggtcctctagaa
aagcagccaatactcttaaccactggcccatctctccaaccgctaaacag
atccttcttcttgtatttaagctagcatttcaatagtggccatctggcaa
agtgaccatcaggtgaccagtagagagatgagctggaaaacattttctga
ggctctgatattcactgcacagtgtgagctgaaaatggttgttgcagtag
cttcctgaggcccatcaacaagtgagtgtaaatgagatggggtaggtggg
tcagggccctgttctctgcagaggcactagaaggcaatccaccccttgtc
tctgccagttcccagcagctgccctggcatccctgacttgagaatcttca
ctccattctctgtccctgccgccagtcatgatctcatccaggtaaacacc
cttctctgctttattgtcttactatgtagctctggtgacctaggctcact
atgtagacaaggctggacttgaacttccagggatccacctgcctctgcct
ctgcctgctgctgagtgctgggattaaaggtgcgtaccatcatgcagaaa
ttactttcattttgttttgttttgttttgagacatggtttctctgtgtag
ccctggctgtcctggaactcactctgtagtccaggctgacctcaaactca
gagctattcttgcttctgcctcccgattgctgggattaaaggtgaacact
gccagcatcaccaaggtgggattcttttctttctttaggacaccttgtaa
atgtagtcagagcacattctgggtaaactaagataagatcctcacttgag
attgaataacccagtacatctttttttggttttttgtt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatattcagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggatctcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatgggatggatcacagggctccc
aatggagagctagagaaagtactcaagagctaaagggaacttcaccctat
agtggacacataatgactaacagtaccctgagctctgactctagctgcat
atgttcaaaagatgctagtccgcatcactgaaagaagtccaatgaacgcg
acttgtgcccgtacagtgacgccaggcaaagggggaagttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_109139946_109140930
seq2: B6Ng01-099M01.b_44_1031

seq1  GAATTCACTGAGGAGTTTAGGTTGGCCTCAAACATGAAGTCTCTTGCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGAGGAGTTTAGGTTGGCCTCAAACATGAAGTCTCTTGCCTG  50

seq1  CAGAAGCCAGGAGAGGGCATTTGACCTCCTGGTACTGAGGTTACAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCCAGGAGAGGGCATTTGACCTCCTGGTACTGAGGTTACAGAGAG  100

seq1  TTGTGAGCCCCCACATGGGTACTGAAAAATCAAACCCAGGTCCTCTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAGCCCCCACATGGGTACTGAAAAATCAAACCCAGGTCCTCTAGAA  150

seq1  AAGCAGCCAATACTCTTAACCACTGGCCCATCTCTCCAACCGCTAAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCCAATACTCTTAACCACTGGCCCATCTCTCCAACCGCTAAACAG  200

seq1  ATCCTTCTTCTTGTATTTAAGCTAGCATTTCAATAGTGGCCATCTGGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCTTCTTGTATTTAAGCTAGCATTTCAATAGTGGCCATCTGGCAA  250

seq1  AGTGACCATCAGGTGACCAGTAGAGAGATGAGCTGGAAAACATTTTCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCATCAGGTGACCAGTAGAGAGATGAGCTGGAAAACATTTTCTGA  300

seq1  GGCTCTGATATTCACTGCACAGTGTGAGCTGAAAATGGTTGTTGCAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTGATATTCACTGCACAGTGTGAGCTGAAAATGGTTGTTGCAGTAG  350

seq1  CTTCCTGAGGCCCATCAACAAGTGAGTGTAAATGAGATGGGGTAGGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGAGGCCCATCAACAAGTGAGTGTAAATGAGATGGGGTAGGTGGG  400

seq1  TCAGGGCCCTGTTCTCTGCAGAGGCACTAGAAGGCAATCCACCCCTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCCCTGTTCTCTGCAGAGGCACTAGAAGGCAATCCACCCCTTGTC  450

seq1  TCTGCCAGTTCCCAGCAGCTGCCCTGGCATCCCTGACTTGAGAATCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAGTTCCCAGCAGCTGCCCTGGCATCCCTGACTTGAGAATCTTCA  500

seq1  CTCCATTCTCTGTCCCTGCCGCCAGTCATGATCTCATCCAGGTAAACACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTCTCTGTCCCTGCCGCCAGTCATGATCTCATCCAGGTAAACACC  550

seq1  CTTCTCTGCTTTATTGTCTTACTATGTAGCTCTGGTGACCTAGGCTCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTGCTTTATTGTCTTACTATGTAGCTCTGGTGACCTAGGCTCACT  600

seq1  ATGTAGACAAGGCTGGACTTGAACTTCCAGGGATCCACCTGCCTCTGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGACAAGGCTGGACTTGAACTTCCAGGGATCCACCTGCCTCTGCCT  650

seq1  CTGCCTGCTGCTGAGTGCTGGGATTAAAGGTGCGTACCATCATGCAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCTGCTGAGTGCTGGGATTAAAGGTGCGTACCATCATGCAGAAA  700

seq1  TTACTTTCATTTTGTTTTGTTTTGTTTTGAGACATGGTTTCTCTGTGTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTCATTTTGTTTTGTTTTGTTTTGAGACATGGTTTCTCTGTGTAG  750

seq1  CCCTGGCTGTCCTGGAACTCACTCTGTAGTCCAGGCTGACCTCAAACTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGGCTGTCCTGGAACTCACTCTGTAGTCCAGGCTGACCTCAAACTCA  800

seq1  GAGCTATTCTTGCTTCTGCCTCCCGATTGCTGGGATTAAAGGTGAACACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTATTCTTGCTTCTGCCTCCCGATTGCTGGGATTAAAGGTGAACACT  850

seq1  GCCAGCATCACCAAGGTGGGATTCTTTTC-TTCTTTAGGACACC-TGTAA  898
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  GCCAGCATCACCAAGGTGGGATTCTTTTCTTTCTTTAGGACACCTTGTAA  900

seq1  ATGTAGTCAGAGCACA-TCTGGGTAAACTAAGATAAGATCCTCACTTGAG  947
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATGTAGTCAGAGCACATTCTGGGTAAACTAAGATAAGATCCTCACTTGAG  950

seq1  ATTG-ATAACCCAGTTACATCTTTTTTTGTTTTTTTGTT  985
      |||| ||||||||| |||||||||||||| |||||||||
seq2  ATTGAATAACCCAG-TACATCTTTTTTTGGTTTTTTGTT  988