MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-100K11
Chromosome	9 (Build37)
Map Location	9,100,242 - 9,101,385
singlet/doublet	singlet
Overlap gene	9030420J04Rik
Upstream gene	AK129341, LOC100039855, 1700018P22Rik, LOC665108, 1700128F08Rik, Trpc6, Pgr
Downstream gene	Cntn5
Link	Open Mouse BAC browser

Click to get alignment info.

name	AK129341 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234915 MGI:2680221
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039855 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039855
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	1700018P22Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69395 MGI:1916645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC665108 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665108
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76669 MGI:1923919
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA pseudo : _no_value

name	Trpc6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22068 MGI:109523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pgr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18667 MGI:97567
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9030420J04Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71544 MGI:1918794
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 4 Proteins

name	Cntn5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244682 MGI:3042287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	AK129341 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113866018 GeneID:234915 MGI:2680221
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence AK129341 transcript_id : NM_001045524.1

name	LOC100039855 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259455 GeneID:100039855
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : hypothetical protein LOC100039855 transcript_id : XM_001473651.1

name	1700018P22Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259443 GeneID:69395 MGI:1916645
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 1700018P22 gene transcript_id : XM_001472999.1

name	Trpc6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7305596 GeneID:22068 MGI:109523
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transient receptor potential cation channel, subfamily C, member 6 transcript_id : NM_013838.1

name	Pgr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112363097 GeneID:18667 MGI:97567
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : progesterone receptor transcript_id : NM_008829.2

name	9030420J04Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385576 GeneID:71544 MGI:1918794
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 49 ESTs, 4 Proteins product : RIKEN cDNA 9030420J04 gene transcript_id : XM_146632.7

name	Cntn5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259445 GeneID:244682 MGI:3042287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : contactin 5 transcript_id : XM_974864.2

name	AK129341 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113866019 GeneID:234915 MGI:2680221
definition	codon_start : 1 product : hypothetical protein LOC234915 protein_id : NP_001038989.1

name	LOC100039855 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259456 GeneID:100039855
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473701.1

name	1700018P22Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259444 GeneID:69395 MGI:1916645
definition	codon_start : 1 product : hypothetical protein LOC69395 protein_id : XP_001473049.1

name	Trpc6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305597 CCDS:CCDS22815.1 GeneID:22068 MGI:109523
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0015279 - store-operated calcium channel activity [Evidence IDA] GO_process : GO:0006816 - calcium ion transport [Evidence IEA]; GO:0007204 - elevation of cytosolic calcium ion concentration [Evidence IDA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : transient receptor protein 6 product : transient receptor potential cation channel, subfamily C, member 6 protein_id : NP_038866.1

name	Pgr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112363098 CCDS:CCDS22816.1 GeneID:18667 MGI:97567
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence IMP]; GO:0008289 - lipid binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0005496 - steroid binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IDA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0030528 - transcription regulator activity [Evidence IMP]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0030879 - mammary gland development [Evidence IMP]; GO:0001542 - ovulation (sensu Mammalia) [Evidence IMP]; GO:0050847 - progesterone receptor signaling pathway [Evidence IDA]; GO:0050678 - regulation of epithelial cell proliferation [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IMP]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : progesterone receptor protein_id : NP_032855.2

name	9030420J04Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94385577 GeneID:71544 MGI:1918794
definition	codon_start : 1 product : hypothetical protein LOC71544 protein_id : XP_146632.7

name	Cntn5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259446 GeneID:244682 MGI:3042287
definition	codon_start : 1 product : contactin 5 protein_id : XP_979958.2

name	LOC665108 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665108
definition	number : 1 pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:76669
definition	number : 1 pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:76669
definition	number : 2 pseudo : _no_value

name	1700128F08Rik (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:76669
definition	number : 3 pseudo : _no_value

clone name	MSMg01-455M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-346N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-525E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354F22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-345D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203O17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-434P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-178M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064E06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-057F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-324H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-168D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-121F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214G15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173I14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190K23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115D06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179J08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216G03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-251C06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-285M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-076P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095J10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238G18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-030M21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257I13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-190J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282G11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227N07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142M20
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-100K11.b	B6Ng01-100K11.g
ACC	DH910087	DH910088
length	1,053	1,134
definition	DH910087\|Mus musculus domesticus DNA, BAC clone: B6Ng01-100K11, 5' end.	DH910088\|Mus musculus domesticus DNA, BAC clone: B6Ng01-100K11, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattccctatttagctgtgtgctccagtttataattgggttatttagtc tgtttgtgtctaattttatgtgttctttatgtattttgtatatttaccct ctgtcagagttagtgttgttgatgatgttttcccattccgtaggctgctg ttttgtcctattgatggtgtccttagccttgcaaaagcttttccacttca agaggtcccatttattgtttatcttagtgcctgagccattgatgttctgt tcatgaatttgtctcctattccaatatgtttaaggcaattccccactttc tcttcattatagtgtgtctggttttgtatttgtgtttttctacatgaaga catccagttagaccaacaccatttgttgaagatgctcttcctgttccatt gtatggatttggcttctttgtaaaaaatcaagtgtctatttctgggtctt caattatattctcttgatcaatctgtatgtttttatgccagtaccatgca atttttattactattgctctgtaatatagctaatattcaggattgtttta gttttcctgaattttttttccatatgaagttgagactttctctttcaagg tctgtaaagcgttgtgttagaattttgaccagaactgcattgcatctgta gattgcttttgataagatgtgcatttttactatgttaatcttactgaccc ataaggatgagaagaatcccagtttttccctattaatagattatttttca tttcaggtactttccattctttttaaaaatcttaaattatttatttcata taattatatttcaaatgttatcccacttcctggctttccctttcacaaac tgccattccatccccctactccctgcttctatgagggggctcctcccacc ccctactcctgcctcaccactctagcattcccctatgctggggcatagag ccttcacaggaccaatggcttccctcccattgacacaaacatgccatcct ctgctacatatgcagctgaagccatgggtcctccatgtatatactttggt ttg	gaattcatcttcacaagcaagtctataaaactaatgaataaaaaatgctg aaatgatccatttactgttagctagcaagttggcacaaaaatgtttggtg ggagccagaggggaatcttgctgatgacgtcaccaacgatgacatcaccc aggctgagctctagaactttgcagagttttgtcaggtcctctctctgtac acttccctcccaatttatgcattccagtgtgacttttccatagtgaaatt tatggctcctatttcaaaatgtttccaaaatctctgtcggtgttctcccc cagagaaccaacagtgactcagagcaactttgagattcaggagaaatgtg aaatattttctgtttgtgttttgaggatgggctctcaaaaaactgtcaga attctgcctcagtctccagggtggacagactgcaaaaagcaattctaaga ctgcaaaaacactgagggatgctctgtgtggtggctgaagcatgcgatac cagaatataggagagagtgatcaaaactttgtctgttatacatcaagttc atgtctcaaacacacaaacaagcaaaaacagtgtagaaaatcagggcctg ggtggtcatggaaacctggaaagagggtttttaatacgatcttttattga gttttcagaatttcatgcatatttatgatcagttttgatcgtgtttactc tgtccctctaattcatcacagaaccagctgtccctactcttccctagttt gtatttacttttgaaaaattagttagttattccatgatccaatgagtcca atttgtgctacccatatatttcctcatgtaaggtctactgaaacttgcta tccagaggctacacccttaggaaaacttcccccagcagccacctaatgtg agcagcttctcactatcagtagactaacaagcttcccaaacctggaaaat tgattggctcagtttttggtcgacactacagatgctgtagtcccatcaga ctaagattggcttttctccagtcctttgtaacttctgactctttctatat ctctctgagaggtcatgaatcttggggaacggcatataatataaatgttc catgtttgcttagaccctatagacaattagtctc
quality values	Open. Hide. 61 61 39 35 61 61 61 61 61 61 61 61 47 47 47 61 61 47 49 49 49 49 61 61 20 16 11 12 18 19 23 28 35 27 27 32 37 55 55 59 61 61 61 59 61 61 59 59 61 61 61 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 59 59 59 32 35 37 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 52 59 61 61 61 61 59 55 59 59 59 61 52 41 52 49 61 59 61 61 59 59 59 59 61 59 59 61 61 61 61 61 61 61 59 59 59 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 59 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 59 59 55 44 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 55 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 43 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 52 52 52 47 43 53 61 61 61 61 61 50 61 61 61 53 34 47 37 50 50 61 53 53 53 61 61 61 53 43 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 43 53 61 53 61 50 45 61 61 61 40 53 33 37 47 27 61 53 47 53 53 53 38 53 53 53 43 43 53 52 53 53 32 39 36 53 47 47 53 50 53 53 57 47 57 53 38 50 53 42 57 36 47 42 53 47 36 50 57 57 53 40 45 52 50 52 53 53 53 43 50 53 52 45 52 50 42 47 52 53 52 34 27 47 37 41 53 33 16 41 39 30 41 53 30 53 57 33 53 41 30 50 47 43 42 23 47 57 57 52 33 21 47 47 45 45 41 42 45 33 32 53 38 41 30 21 50 32 57 57 57 32 33 29 33 57 57 36 28 28 57 30 31 45 38 53 53 37 47 28 33 42 40 28 57 57 57 42 38 57 53 57 28 40 42 24 57 38 57 14 52 38 38 38 53 32 44 26 57 40 42 29 47 40 53 34 34 29 53 35 35 42 32 57 33 31 31 53 42 29 53 51 37 37 42 28 53 37 27 33 43 41 34 44 35 36 27 23 53 45 30 20 53 30 23 47 16 30 29 19 11 15 29 29 32 40 28 36 27 37 48 32 22 37 32 29 45 47 47 30 20 25 23 36 30 47 28 12 29 28 32 29 18 10 40 28 24 26 6 45 45 45 32 25 33 22 31 18 14 45 29 28 47 30 36 37 29 27 31 28 29 28 39 33 36 18 29 39 20 15 22 29 34 34 28 23 14 11 11 18 20 13 43 26 43 41 33 17 14 12 43 34 22 29 37 46 28 20 24 28 29 6 26 17 26 29 18 40 24 18 25 29 28 21 32 26 22 28 17 23 33 11 12 5 14 15 36 29 26 16 43 36 23 23 30 30 23 11 9 36 10 38 14 14 32 25 41 15 22 19 22 33 16 24 28 19 25 23 22 19 14 15 17 19 14 28 25 31 23 14 12 6 9 24 13 19 20 22 12 16 38 6 5 8 15 15 19 20 5 7 9 5 10 16 9 5 4 7 14 24 21 27 20 6 17 7 7	Open. Hide. 61 49 52 59 13 12 14 15 21 18 23 7 10 15 11 24 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 59 61 61 59 52 59 28 28 35 36 37 40 50 59 59 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 44 55 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 59 59 55 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 52 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 43 61 59 59 59 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 61 61 61 59 59 59 61 61 59 59 59 59 61 52 61 61 55 61 61 55 55 55 55 55 55 55 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 52 61 61 61 61 61 55 61 61 61 50 55 49 55 55 55 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 55 61 55 55 55 55 50 55 61 61 61 52 53 61 50 61 61 61 61 61 61 61 53 61 61 52 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 42 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 52 53 61 61 61 61 61 61 61 61 53 61 61 61 61 61 47 61 53 61 45 61 39 61 61 61 46 53 52 45 35 53 45 39 39 45 52 57 57 45 52 42 27 42 24 37 53 57 53 46 32 53 46 53 53 53 57 57 53 45 53 31 57 42 28 57 57 57 53 42 45 38 53 53 40 42 47 53 53 57 57 32 50 50 57 53 45 45 31 57 57 30 31 20 12 35 28 31 57 50 40 36 40 57 45 26 43 33 45 57 26 32 53 50 57 32 41 32 45 41 57 52 52 48 40 39 53 41 38 57 32 57 34 40 50 50 47 37 57 38 22 57 53 53 53 36 36 36 36 41 30 30 32 42 43 40 52 18 57 14 42 35 27 40 43 50 52 35 45 52 46 38 37 24 27 24 9 21 18 57 38 33 30 37 42 57 40 40 32 36 42 57 18 20 23 13 24 23 36 52 43 53 57 57 33 29 19 29 29 36 52 44 40 33 31 25 20 36 33 57 29 33 44 42 33 33 25 6 26 30 40 40 31 36 33 31 27 37 36 57 48 44 16 33 44 33 34 37 57 37 33 37 36 35 14 17 8 6 12 12 19 28 26 28 33 20 18 19 24 51 20 33 35 29 26 22 48 37 51 19 18 41 29 39 27 25 29 34 22 34 22 14 48 23 29 25 29 23 18 13 24 24 17 14 25 18 5 11 18 51 51 21 26 14 44 28 30 36 33 30 23 20 31 24 18 35 43 21 25 32 12 9 12 23 36 14 23 31 23 38 28 19 25 35 22 20 26 29 11 29 34 36 28 21 16 21 23 29 21 29 14 28 29 26 27 21 23 22 24 33 21 28 31 28 9 41 23 9 21 31 43 9 43 43 46 24 17 30 29 29 27 22 34 31 27 34 27 23 14 18 41 51 46 35 19 8 26 18 6 8 10 26 11 12 23 10 5 6 26 14 20 24 19 20 7 22 15 14 30 38 25 13 12 24 21 15 51 22 38 16 9 11 14 10 9 9 14 11 27 28 34 11 22 6 5 22 11 34 14 24 27 18 35 17 21 10 30 21 14 22 18 6 5 6 26 15 12 15 13 31 6 7 6 7 6 6 8 23 5 8 4 6 8 9 10 5 16 8 33 13 30 16 22 15 10 19 7 8 5 22 14 34 14 15 5 7 4 5 6 15 9 13 11 6 22 20 6 9 4 3 5 16 14 14 5 5 4 4 11 9 19 5 4 6 23 4 15 7 4 3 6 5 22 18 4 12 10 12 6 20 6 11 18 5 9 9 7 4 5 9 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_9100242_9101385
seq2: B6Ng01-100K11.g_70_1203 (reverse)

seq1  GAGACTAATTGTCTATAGGGTCCTAAGCCACACATGGGACATCTATATTA  50
      ||||||||||||||||||||| ||||| || |||||| |||| |||||||
seq2  GAGACTAATTGTCTATAGGGT-CTAAG-CAAACATGGAACATTTATATTA  48

seq1  TATGCTGTCCCCCAAGATTCATGGACCTTCTCAGAAGGAGATATAG-AAG  99
      ||||| || ||||||||||||| |||| |||||||  ||||||||| |||
seq2  TATGCCGTTCCCCAAGATTCAT-GACC-TCTCAGA--GAGATATAGAAAG  94

seq1  AGTCAGAAGTTACAAAGGACTGGAGAAAAGCAAAATCTTAAGTTCTGGAT  149
      |||||||||||||||||||||||||||||||  |||||||   ||| |||
seq2  AGTCAGAAGTTACAAAGGACTGGAGAAAAGC-CAATCTTA--GTCT-GAT  140

seq1  GGGACTACAGCATCTGTAGTTGTCTGAAC-AAAACTGAGCCAATCAATTT  198
      ||||||||||||||||||| |||| || | ||||||||||||||||||||
seq2  GGGACTACAGCATCTGTAG-TGTC-GACCAAAAACTGAGCCAATCAATTT  188

seq1  TCCAGGTTTGGGAAGCTTGTTAGTCTACTGATAGTGGAGAAGCTGCTCAC  248
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCCAGGTTTGGGAAGCTTGTTAGTCTACTGATAGT-GAGAAGCTGCTCAC  237

seq1  ATTAGGTGGCTGCTGGGGGAAGTTTTCCTAAGGGTGTAGCCTCTGGATAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTGGCTGCTGGGGGAAGTTTTCCTAAGGGTGTAGCCTCTGGATAG  287

seq1  CAAGTTTCAGTAGACCTTACATGAGG-AATATATGGGTAGCACAAATTGG  347
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CAAGTTTCAGTAGACCTTACATGAGGAAATATATGGGTAGCACAAATTGG  337

seq1  ACTCATTGGATCATGGAATAACTAACTAATTTTTCAAAAGTAAATACAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTGGATCATGGAATAACTAACTAATTTTTCAAAAGTAAATACAAA  387

seq1  CTAGGGAAGAGTAGGGACAGCTGGTTCTGTGATGAATTAGAGGGACAGAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGAAGAGTAGGGACAGCTGGTTCTGTGATGAATTAGAGGGACAGAG  437

seq1  TAAACACGATCAAAACTGATCATAAATATGCATGAAATTCTGAAAACTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACACGATCAAAACTGATCATAAATATGCATGAAATTCTGAAAACTCA  487

seq1  ATAAAAGATCGTATTAAAAACCCTCTTTCCAGGTTTCCATGACCACCCAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAGATCGTATTAAAAACCCTCTTTCCAGGTTTCCATGACCACCCAG  537

seq1  GCCCTGATTTTCTACACTGTTTTTGCTTGTTTGTGTGTTTGAGACATGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTGATTTTCTACACTGTTTTTGCTTGTTTGTGTGTTTGAGACATGAA  587

seq1  CTTGATGTATAACAGACAAAGTTTTGATCACTCTCTCCTATATTCTGGTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGTATAACAGACAAAGTTTTGATCACTCTCTCCTATATTCTGGTA  637

seq1  TCGCATGCTTCAGCCACCACACAGAGCATCCCTCAGTGTTTTTGCAGTCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCATGCTTCAGCCACCACACAGAGCATCCCTCAGTGTTTTTGCAGTCT  687

seq1  TAGAATTGCTTTTTGCAGTCTGTCCACCCTGGAGACTGAGGCAGAATTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATTGCTTTTTGCAGTCTGTCCACCCTGGAGACTGAGGCAGAATTCT  737

seq1  GACAGTTTTTTGAGAGCCCATCCTCAAAACACAAACAGAAAATATTTCAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTTTTTGAGAGCCCATCCTCAAAACACAAACAGAAAATATTTCAC  787

seq1  ATTTCTCCTGAATCTCAAAGTTGCTCTGAGTCACTGTTGGTTCTCTGGGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCCTGAATCTCAAAGTTGCTCTGAGTCACTGTTGGTTCTCTGGGG  837

seq1  GAGAACACCGACAGAGATTTTGGAAACATTTTGAAATAGGAGCCATAAAT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACACCGACAGAGATTTTGGAAACATTTTGAAATAGGAGCCATAAAT  887

seq1  TTCACTATGGAAAAGTCACACTGGAATGCATAAATTGGGAGGGAAGTGTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTATGGAAAAGTCACACTGGAATGCATAAATTGGGAGGGAAGTGTA  937

seq1  CAGAGAGAGGACCTGACAAAACTCTGCAAAGTTCTAGAGCTCAGCCTGGG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGAGGACCTGACAAAACTCTGCAAAGTTCTAGAGCTCAGCCTGGG  987

seq1  TGATGTCATCGTTGGTGACGTCATCAGCAAGATTCCCCTCTGGCTCCCAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCATCGTTGGTGACGTCATCAGCAAGATTCCCCTCTGGCTCCCAC  1037

seq1  CAAACATTTTTGTGCCAACTTGCTAGCTAACAGTAAATGGATCATTTCAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATTTTTGTGCCAACTTGCTAGCTAACAGTAAATGGATCATTTCAG  1087

seq1  CATTTTTTATTCATTAGTTTTATAGACTTGCTTGTGAAGATGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTATTCATTAGTTTTATAGACTTGCTTGTGAAGATGAATTC  1134

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information