BAC Information

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BAC

Clone NameB6Ng01-101L16
Chromosome9 (Build37)
Map Location 118,149,973 - 118,151,031
singlet/doubletsinglet
Overlap genenone
Upstream geneRbms3, LOC665840, LOC100039650, LOC100039681, Azi2, 2010110K16Rik
Downstream geneEomes, Golga4, Itga9, LOC100039768, Ctdspl, Vill, Plcd1, Dlec1, Acaa1b, EG546165, Slc22a14, Slc22a13, 9330176C04Rik, Oxsr1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101L16.bB6Ng01-101L16.g
ACCDH910823DH910824
length1,2331,057
definitionDH910823|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L16, 5' end.DH910824|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaatgtcaaagtaaatggtgagaagctggaaagcattccaactaa
aatcagggactagacaaggctgcccactttctccctacctattcaacatt
gtacctgaagtcctagccagagcaattcgacgacaaaaggagatcaaggg
gatacaaattggaaaggaagaagtcaaaatatcactttttgcagacgata
tgatagtatatataagtgaccctaaaaattccaccagagaactcctaaac
ctgataaacagcttcagtgaagtagttgggatataaaattaattcaaaca
agtcaatggcctttctctacactaaggataaacgggctgagaaagaaatt
agggaaacaacactcttctcaatagtcacaaataatataaaataccttgg
tgtgactctaactaaggaagtaaaagatctgtatgataagaacttcaagt
ctctgaagaaagaaattaaagaagatctcagaagatggaaagatctccca
tgctcatggattggcaggatcaatatagtaaaaatggctatcttgccaaa
agcaatctacagattcaatgcaatccccatcaaaattccaactcaattct
tcaacgaattagaaagggcaatctgcaaattaatctggaataacaaaaaa
cctaggatagcaaaaactcttctcaaggataaaagaacctctggtggaat
caccatgcccgacctaaagctgtactacagagcaattgtgataaaaactg
catggtcctggtatagcgacagacaagtagaccaatggaacagaattgaa
gacccagagatgaacccacacacctatggtcacttgatctttgacaggga
gctaaaaccatccagtggaaaaaagacagcattttcacaaatggtgctgg
cacactggcttgttatcatgtagaagattgcgattgattcattactatct
ctgtactagtcaatctagtggatagactcacataaaactagagacactga
acttatagaggggaagtaggaagctcgagatgtgggtacagggaaattct
gaatgaaaggcaatgcttgtctgtaaatcgagatcataaatggaactctt
aatgctagctcggcagccaagatcgtcatagcaaggatcacgaatggaat
ctttccttctatcgactgggacatatgtccaga
gaattcagatcagtgccagagtgtgaaaacttaggtatatctcacatata
atcaccaagacagcagctgggccatggagaatgctaagtgtggggtaaaa
ataatcttcagtgggagacttcacaggaacccaagggactgaggtggggt
gagggtctgcagtgctgtgtgagggaagtggcagggtacccacggcatgc
tagcagagccaatggagacagcagctgactcagcacatcaagacccagga
tcagccataggatgggcaacttctgacttcatctcttggagccttcagtt
gctacatgagaaattcaaccacactgcagggcaaagccatgtgtatgtct
tcaaggcagaaggctgaagccattttggattttctctgagtagatcacct
gaaacaatcgaatgaccaatggggaggaagcaccattcatccaactctaa
tatggattcctgcgggtgcataagccggcgatattaactgatatcagagc
aaaggcttaaactaaactacttttattgatgaaatgagtttggagtcaag
atatttccaagatagaatcagtaggacctgagatctaaataaaagttata
ctggggaatagagattttaaaatgacgaccaaaccttactggataccagc
tattgactttccagccatggcaccagagtgggtgttaccagcatggatag
ctagctcctgccttttctagaccttgaaacatattagggactatggcaat
gttacagattccagagtagtacaaccccttagagactgatcgcatggttc
atttactaagatatactttctcttaagttggtttttgtaaacatagctct
tttgttcaggagttagaatcagggaagtaaacaacatgaacgttggccag
cataagtgtagcttgtgtgtcaactataaactctaacctcacaacagatc
cgtgcctcctgggagaaatgacaaagaggatttggaactgatggcccctc
actcatgcagatgtaattgcagagaaaccgtggtgggttgtttgtgtgac
ctatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_118149973_118151031
seq2: B6Ng01-101L16.g_70_1126 (reverse)

seq1  CAGATAGTTCACACAA--CACCCA-CACGGTTTCCTCTGCAATTAACATC  47
      ||||||| ||||||||   ||||| |||||||| |||||||||| |||||
seq2  CAGATAGGTCACACAAACAACCCACCACGGTTT-CTCTGCAATT-ACATC  48

seq1  TTGCATGAGTGAGGGGCCATCTGTTTCAAAATCCTCTTTGTCATTTCTCC  97
       |||||||||||||||||||| | ||| ||||||||||||||||||||||
seq2  -TGCATGAGTGAGGGGCCATCAG-TTCCAAATCCTCTTTGTCATTTCTCC  96

seq1  CAGGAGGCACCGGATCCTGTTGTGAGGTTAGAGTTTATAGTTGAACACAC  147
      ||||||||| ||||| ||||||||||||||||||||||||||| ||||||
seq2  CAGGAGGCA-CGGAT-CTGTTGTGAGGTTAGAGTTTATAGTTG-ACACAC  143

seq1  CAGCTACACTTATGCTGGCCAACGTTCATGTTGTTTACTTCCCTGATTCT  197
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTACACTTATGCTGGCCAACGTTCATGTTGTTTACTTCCCTGATTCT  193

seq1  AACTCCTGAACAAAAGAGCTATGTTTACAAAAACCACTTGAAGAGAAGGT  247
      ||||||||||||||||||||||||||||||||||||  | ||||||| ||
seq2  AACTCCTGAACAAAAGAGCTATGTTTACAAAAACCAACTTAAGAGAAAGT  243

seq1  ATATCTTAGT-AATGAACCATGCGATCAGTCTCTAAGGGGTTGTACTACT  296
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTAGTAAATGAACCATGCGATCAGTCTCTAAGGGGTTGTACTACT  293

seq1  CTGGAATCTGTAACATTGCCATAGTCCCTAATATGTTTCAAGGTCTAG-A  345
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGGAATCTGTAACATTGCCATAGTCCCTAATATGTTTCAAGGTCTAGAA  343

seq1  AAGGCAGGAGCTAGCTATCCATGCTGGTAACACCCACTCTGGTGCCATGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAGGAGCTAGCTATCCATGCTGGTAACACCCACTCTGGTGCCATGG  393

seq1  CTGGAAAGTCAATAGCTGGTATCCAGTAAGGTTTGGTCGTCATTTTAAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGTCAATAGCTGGTATCCAGTAAGGTTTGGTCGTCATTTTAAAA  443

seq1  TCTCTATTCCCCAGTATAACTTTTATTTAGATCTCAGGTCCTACTGATTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTATTCCCCAGTATAACTTTTATTTAGATCTCAGGTCCTACTGATTC  493

seq1  TATCTTGGAAATATCTTGACTCCAAACTCATTTCATCAATAAAAGTAGTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGGAAATATCTTGACTCCAAACTCATTTCATCAATAAAAGTAGTT  543

seq1  TAGTTTAAGCCTTTGCTCTGATATCAGTTAATATCGCCGGCTTATGCACC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTAAGCCTTTGCTCTGATATCAGTTAATATCGCCGGCTTATGCACC  593

seq1  CGCAGGAATCCATATTAGAGTTGGATGAATGGTGCTTCCTCCCCATTGGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAGGAATCCATATTAGAGTTGGATGAATGGTGCTTCCTCCCCATTGGT  643

seq1  CATTCGATTGTTTCAGGTGATCTACTCAGAGAAAATCCAAAATGGCTTCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGATTGTTTCAGGTGATCTACTCAGAGAAAATCCAAAATGGCTTCA  693

seq1  GCCTTCTGCCTTGAAGACATACACATGGCTTTGCCCTGCAGTGTGGTTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCTGCCTTGAAGACATACACATGGCTTTGCCCTGCAGTGTGGTTGA  743

seq1  ATTTCTCATGTAGCAACTGAAGGCTCCAAGAGATGAAGTCAGAAGTTGCC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCATGTAGCAACTGAAGGCTCCAAGAGATGAAGTCAGAAGTTGCC  793

seq1  CATCCTATGGCTGATCCTGGGTCTTGATGTGCTGAGTCAGCTGCTGTCTC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTATGGCTGATCCTGGGTCTTGATGTGCTGAGTCAGCTGCTGTCTC  843

seq1  CATTGGCTCTGCTAGCATGCCGTGGGTACCCTGCCACTTCCCTCACACAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCTCTGCTAGCATGCCGTGGGTACCCTGCCACTTCCCTCACACAG  893

seq1  CACTGCAGACCCTCACCCCACCTCAGTCCCTTGGGTTCCTGTGAAGTCTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCAGACCCTCACCCCACCTCAGTCCCTTGGGTTCCTGTGAAGTCTC  943

seq1  CCACTGAAGATTATTTTTACCCCACACTTAGCATTCTCCATGGCCCAGCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGAAGATTATTTTTACCCCACACTTAGCATTCTCCATGGCCCAGCT  993

seq1  GCTGTCTTGGTGATTATATGTGAGATATACCTAAGTTTTCACACTCTGGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTGGTGATTATATGTGAGATATACCTAAGTTTTCACACTCTGGC  1043

seq1  ACTGATCTGAATTC  1059
      ||||||||||||||
seq2  ACTGATCTGAATTC  1057