BAC Information

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BAC

Clone NameB6Ng01-101N09
Chromosome9 (Build37)
Map Location 102,451,679 - 102,606,572
singlet/doubletdoublet
Overlap geneLOC664843, Cep63, Anapc13
Upstream geneEphb1, 9630041A04Rik, Ky
Downstream geneAmotl2, EG434510, Ryk, Slco2a1, Rab6b, Srprb, Trf, 1300017J02Rik, Topbp1, Cdv3, Bfsp2, Tmem108, 4932413F04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101N09.bB6Ng01-101N09.g
ACCDH910901DH910902
length995278
definitionDH910901|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N09, 5' end.DH910902|Mus musculus domesticus DNA, BAC clone: B6Ng01-101N09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,605,578 - 102,606,572)(102,451,679 - 102,451,956)
sequence
gaattcccagcattcacataaaaaagtacagcttgtctgagcttttctgt
aaccctggcagtgatgtggagcagaggcaggaggatactgagagcttgct
ggccagcctaaccaaaacggagagcagctagttcagtgagagaccctgtc
tcaagtgaagaatatggaaagccatagaggaagactcccaggtgctgtgc
atgggcacacaccctgcacactcacatgtggtgccacaaatacaaacatg
ttacactttttttcttcttcttcttttttgaggcagggtttttctgtgta
gccttggctatcctggaactctgtagaccaggctggcctggaactcagct
ccacctacctcggcctagtgctgggattaaaggcatgccccaacaccaaa
cagctaccatctcttctcagtagtgtcagggggatgccattgaatggctc
tcctgtttcaaccctgccacctgggactatgtgtctgagtgacattgtcc
aggcagagggtgaaagtacgggggagagaccccttaccgttggattcctg
tgatcagttccaacaggcctcacaggtgagttaagaatgggaaatgcact
gtgtcagcacaggttttcttgctggagttagtccttgcctctatcctgtt
tatagggaatacactgtcgtggttgatgggttctgattcagatggtgttc
ccagggagactgtggtggtttgaatatgcttggcccagggagtggcacta
tcaggaggtgaggccttgttggagtaggtgtgtcactgtgggggtgggct
ttgataccctagtcctagcttgcctggaagccagtgttccttgctagcag
ccttcagattaaagatgtagaactctcagctcctcttgtaccatgcctgc
ctagatgctgctttgttcctgcccttgatatatggactgaacctctgact
tgtaagccagcaccaaataatatgtcccttgtaagagtggcctta
ttggaacacacactttggttctgcttcttggcacacgctgggtgcttgat
aaatgctcagtaagtgttttcttgggaaaactgagaagggatgtgaacgg
agctgccagcaaccattccttgaacatttgtagagtgtttcgttttccca
gaactggcccttgtggtttcattcaactctgcctgccacagcctggatgg
tgagagaggccgagagtctcaggggaggatcccaacccagcgaaggggga
atggctgccctggggatggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_102605578_102606572
seq2: B6Ng01-101N09.b_48_1042 (reverse)

seq1  TAAGGCAACTCTTACAAGGACAATATTTATTTGGTGCTGGCTTACAGGTT  50
      |||||| ||||||||||||   ||| |||||||||||||||||||| | |
seq2  TAAGGCCACTCTTACAAGGGACATA-TTATTTGGTGCTGGCTTACAAG-T  48

seq1  CAGAGGTTCAGTCCAT-TATCATCAAGGCAGGAACATGGCAGCATCTAGG  99
      |||||||||||||||| |||||  | ||||||||||  ||||||||||||
seq2  CAGAGGTTCAGTCCATATATCA--AGGGCAGGAACAAAGCAGCATCTAGG  96

seq1  CAGGCATGGTACAAGAGGAGCTGAGAGTTCTACATC-TTCATCTGAAGGC  148
      |||||||||||||||||||||||||||||||||||| || ||||||||||
seq2  CAGGCATGGTACAAGAGGAGCTGAGAGTTCTACATCTTTAATCTGAAGGC  146

seq1  TGCTAGCAA-GAACACTGGCTTCCAGGC-AGCTAGGACTAGGGTATCAAA  196
      ||||||||| |||||||||||||||||| |||||||||||||||||||||
seq2  TGCTAGCAAGGAACACTGGCTTCCAGGCAAGCTAGGACTAGGGTATCAAA  196

seq1  GCCCACCCCCACAGTGACACACCTACTCCAACAAGGCCTCACCTCCTGAT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACCCCCACAGTGACACACCTACTCCAACAAGGCCTCACCTCCTGAT  246

seq1  AGTGCCACTCCCTGGGCCAAGCATATTCAAACCACCACAGTCTCCCTGGG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCACTCCCTGGGCCAAGCATATTCAAACCACCACAGTCTCCCTGGG  296

seq1  AACACCATCTGAATCAGAACCCATCAACCACGACAGTGTATTCCCTATAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCATCTGAATCAGAACCCATCAACCACGACAGTGTATTCCCTATAA  346

seq1  ACAGGATAGAGGCAAGGACTAACTCCAGCAAGAAAACCTGTGCTGACACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATAGAGGCAAGGACTAACTCCAGCAAGAAAACCTGTGCTGACACA  396

seq1  GTGCATTTCCCATTCTTAACTCACCTGTGAGGCCTGTTGGAACTGATCAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTTCCCATTCTTAACTCACCTGTGAGGCCTGTTGGAACTGATCAC  446

seq1  AGGAATCCAACGGTAAGGGGTCTCTCCCCCGTACTTTCACCCTCTGCCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCCAACGGTAAGGGGTCTCTCCCCCGTACTTTCACCCTCTGCCTG  496

seq1  GACAATGTCACTCAGACACATAGTCCCAGGTGGCAGGGTTGAAACAGGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGTCACTCAGACACATAGTCCCAGGTGGCAGGGTTGAAACAGGAG  546

seq1  AGCCATTCAATGGCATCCCCCTGACACTACTGAGAAGAGATGGTAGCTGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATTCAATGGCATCCCCCTGACACTACTGAGAAGAGATGGTAGCTGT  596

seq1  TTGGTGTTGGGGCATGCCTTTAATCCCAGCACTAGGCCGAGGTAGGTGGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTTGGGGCATGCCTTTAATCCCAGCACTAGGCCGAGGTAGGTGGA  646

seq1  GCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTTCCAGGATAGCCAAGGCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTTCCAGGCCAGCCTGGTCTACAGAGTTCCAGGATAGCCAAGGCT  696

seq1  ACACAGAAAAACCCTGCCTCAAAAAAGAAGAAGAAGAAAAAAAGTGTAAC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGAAAAACCCTGCCTCAAAAAAGAAGAAGAAGAAAAAAAGTGTAAC  746

seq1  ATGTTTGTATTTGTGGCACCACATGTGAGTGTGCAGGGTGTGTGCCCATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGTATTTGTGGCACCACATGTGAGTGTGCAGGGTGTGTGCCCATG  796

seq1  CACAGCACCTGGGAGTCTTCCTCTATGGCTTTCCATATTCTTCACTTGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCACCTGGGAGTCTTCCTCTATGGCTTTCCATATTCTTCACTTGAG  846

seq1  ACAGGGTCTCTCACTGAACTAGCTGCTCTCCGTTTTGGTTAGGCTGGCCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTCTCTCACTGAACTAGCTGCTCTCCGTTTTGGTTAGGCTGGCCA  896

seq1  GCAAGCTCTCAGTATCCTCCTGCCTCTGCTCCACATCACTGCCAGGGTTA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTCTCAGTATCCTCCTGCCTCTGCTCCACATCACTGCCAGGGTTA  946

seq1  CAGAAAAGCTCAGACAAGCTGTACTTTTTTATGTGAATGCTGGGAATTC  995
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGCTCAGACAAGCTGTACTTTTTTATGTGAATGCTGGGAATTC  995

seq1: chr9_102451679_102451956
seq2: B6Ng01-101N09.g_76_353

seq1  TTGGAACACACACTTTGGTTCTGCTTCTTGGCACACGCTGGGTGCTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAACACACACTTTGGTTCTGCTTCTTGGCACACGCTGGGTGCTTGAT  50

seq1  AAATGCTCAGTAAGTGTTTTCTTGGGAAAACTGAGAAGGGATGTGAACGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTCAGTAAGTGTTTTCTTGGGAAAACTGAGAAGGGATGTGAACGG  100

seq1  AGCTGCCAGCAACCATTCCTTGAACATTTGTAGAGTGTTTCGTTTTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCAGCAACCATTCCTTGAACATTTGTAGAGTGTTTCGTTTTCCCA  150

seq1  GAACTGGCCCTTGTGGTTTCATTCAACTCTGCCTGCCACAGCCTGGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGGCCCTTGTGGTTTCATTCAACTCTGCCTGCCACAGCCTGGATGG  200

seq1  TGAGAGAGGCCGAGAGTCTCAGGGGAGGATCCCAACCCAGCGAAGGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGAGGCCGAGAGTCTCAGGGGAGGATCCCAACCCAGCGAAGGGGGA  250

seq1  ATGGCTGCCCTGGGGATGGGGGGGGGGG  278
      ||||||||||||||||||||||||||||
seq2  ATGGCTGCCCTGGGGATGGGGGGGGGGG  278