BAC Information

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BAC

Clone NameB6Ng01-102O15
Chromosome9 (Build37)
Map Location 19,297,458 - 19,298,619
singlet/doubletsinglet
Overlap genenone
Upstream geneMuc16, Olfr24, Olfr828, Olfr829, Olfr830, Olfr831-ps1, Olfr832, GA_x5J8B7W6RL5-13870817-13871726, Olfr834, Olfr835, Olfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1, GA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697, Olfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849, Olfr850
Downstream geneOlfr851, Olfr852-ps1, Olfr853, Olfr854, Olfr855, Zfp75, EG624341, LOC665751, Olfr857, Olfr858-ps1, Olfr58, Olfr859, Olfr860, GA_x5J8B7W6RL5-13004417-13003354, Olfr862, Olfr77, EG665823, Olfr863-ps1, Olfr864-ps1, Olfr865-ps1, Olfr866, Olfr867, Olfr868, Olfr869, Olfr870, Olfr871, Olfr872, Olfr39, Olfr873, Olfr18, Zfp560, 4921534A09Rik, EG624824, Zfp26, Zfp426
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102O15.bB6Ng01-102O15.g
ACCDH911667DH911668
length1,1541,175
definitionDH911667|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O15, 5' end.DH911668|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatatcaaatatatttgaaaaaagaagatgaatgaagagaaata
ttcaaggaataaattttatatgtttattactttgttattttagaaagtta
tgaaatacatcaatatatctaacctgattaattgtgtcaagaagcatggt
attgtcatgtgtatcttttaccaaaataaaggacttgcctccctggttct
tctgatttctatcttatacatttaagtgatacatagacacccctaaacct
tatgaaacaagaaatctgaagatttgatttttctgcaaactcaaagacaa
ccaaaaatatttaattacttttaagccatcaattttagccattttaaaag
agaaacttagcaaactaacattttcatcaaatctctggatactactacca
cagcaccttaaagtaatatgtgaatgatttaagatagccattatagtcaa
gaaatgaccaatgtctggtcataagaaaatgggcagtgttcgtctagata
gtattttacaggcaaaatgaaatatatgtgtattacagtataaatatgtg
tgttaaacacaccaaaaatttacaagtgaagtaaagctcttatttctcat
aaattatgttacatgcccttacttcctctaagaatagaattgtaagcctt
accatgtaccagtaagatactatgataatgtatttgctaccttactgaca
ataatcctcagaatctcacctggaagttgtacaagattggctgccttagg
actcaatgggcccctggagaaccatgatcatctttggttgatgcaaatct
ttggttggatgatgtttcattctaacacacaaagaacattaaggagttag
tcacagggtgagtttgacagtaaagtataggtatcataggtatttaatat
ccaaggcttcccactagaccctgtatttcattgtaattccaatcccaagg
gagcactgcttaatgactgagtatatagaagttgtagaattaaatgtgca
tgatttgatgacccatgagtagaatactattctattatttctgatccctt
catgaagagtattttcaagctcttccaacagagttaccagaaggttccat
ttttgttttttccatttatatagaattccagttatgtttttatgatatgc
tcct
gaattctttgtttagctctgtaccccagttttttaatagggttgtttgat
tttctgaggtccatgttcttgagttctttatatatattggatatcagttc
cctatctgatttaggattggtaaagatcctttcccaatcagttggtagct
ttttgtcttattgacagtgtcttttgacttgcagaatctttgtaatttta
tgaggtcccatatgtcaattcttgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcctgtgtccatatcttcgaggcttttccccactc
tctcctctataagtttcagtgtctctggttttatgtggagttccttgatc
cacttagacttgagctttgtacaagaagataacaatggatcaattgggtt
catttctgggactgtctattgctgtaccagtgccatgcagcttttatcac
aattgctctgtagtacaacttgaagtcaggcatgacccagaggttctttt
attgttgagaatagtttttgctatcctcagtgttttgttattccagatga
atttgcaaattgtcctttctaacttggtgaggaattgagttggaaatttg
atggagattgcattaaatccatagattgctttctgcaagatagctaattt
tactgtattgattctgcaaatccatgagcaaggacaattgttccattgtc
tgagatcttcaatttctttcttcagagacttgaatttcttatcatacata
tattttcacttccttagttagagcacaccaaggttttttatatttatctg
tgactattgttgaaggttgctgtttccctaatttctttctcagcctgttt
atcctttgtatagaaaaaggccactgatttgtttgacttaaaattatatc
cagctactgcactgaagctgtttattaggtttaggagttctctgggtgga
atttttaggatcacttatatatactgtcaatttcatctgctaaaagtcat
attttacttcttcctttccaatttggtatccccctgacctcctttttgtt
tttctaatttctctgggctataaactattcagtgggatatgtgaatactt
agggaggaagttgtaaggcccttctaatcctgaatctagggggatgaatt
ccaattctcccatttgatggatttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_19297458_19298619
seq2: B6Ng01-102O15.b_46_1199 (reverse)

seq1  AGGAGCATATCAATAAAAACATAGATTGAAATTTTCTATATAAATTGTAA  50
      ||||||||||| |||||||||||  | |||   |||||||||||| | ||
seq2  AGGAGCATATC-ATAAAAACATAACTGGAA---TTCTATATAAATGGAAA  46

seq1  AAACAAAAATGGAA-CTTCTTGTAAAACTCTGTT-GAAGAGCTTTGAAAA  98
      |||||||||||||| ||||| ||  ||||||||| ||||||| |||||||
seq2  AAACAAAAATGGAACCTTCTGGT--AACTCTGTTGGAAGAGC-TTGAAAA  93

seq1  TACTCTTCATGAAAGGGATCAGAAATAATAGAATAGTATTCTTAACCTCA  148
      ||||||||||| ||||||||||||||||||||||||||||||    ||||
seq2  TACTCTTCATG-AAGGGATCAGAAATAATAGAATAGTATTCT---ACTCA  139

seq1  TGGGTCATCAAATCATGCACATTTAATTCTAC-ACTTCTATATACTCAGT  197
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TGGGTCATCAAATCATGCACATTTAATTCTACAACTTCTATATACTCAGT  189

seq1  CATTAAGCAGTGCTCCCTTGGGATTGGAATTACAATGAAATACAGGGTCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGCAGTGCTCCCTTGGGATTGGAATTACAATGAAATACAGGGTCT  239

seq1  AGTGGGAAGCCTTGGATATTAAATACCTATGATACCTATACTTTACTGTC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGAAGCCTTGGATATTAAATACCTATGATACCTATACTTTACTGTC  289

seq1  AAACTCACCCTGTGACTAACTCCTTAATGTTCTTTGTGTGTTAGAATGAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCACCCTGTGACTAACTCCTTAATGTTCTTTGTGTGTTAGAATGAA  339

seq1  ACATCATCCAACCAAAGATTTGCATCAACCAAAGATGATCATGGTTCTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATCCAACCAAAGATTTGCATCAACCAAAGATGATCATGGTTCTCC  389

seq1  AGGGGCCCATTGAGTCCTAAGGCAGCCAATCTTGTACAACTTCCAGGTGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCCCATTGAGTCCTAAGGCAGCCAATCTTGTACAACTTCCAGGTGA  439

seq1  GATTCTGAGGATTATTGTCAGTAAGGTAGCAAATACATTATCATAGTATC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTGAGGATTATTGTCAGTAAGGTAGCAAATACATTATCATAGTATC  489

seq1  TTACTGGTACATGGTAAGGCTTACAATTCTATTCTTAGAGGAAGTAAGGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGTACATGGTAAGGCTTACAATTCTATTCTTAGAGGAAGTAAGGG  539

seq1  CATGTAACATAATTTATGAGAAATAAGAGCTTTACTTCACTTGTAAATTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAACATAATTTATGAGAAATAAGAGCTTTACTTCACTTGTAAATTT  589

seq1  TTGGTGTGTTTAACACACATATTTATACTGTAATACACATATATTTCATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGTGTTTAACACACATATTTATACTGTAATACACATATATTTCATT  639

seq1  TTGCCTGTAAAATACTATCTAGACGAACACTGCCCATTTTCTTATGACCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGTAAAATACTATCTAGACGAACACTGCCCATTTTCTTATGACCA  689

seq1  GACATTGGTCATTTCTTGACTATAATGGCTATCTTAAATCATTCACATAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTGGTCATTTCTTGACTATAATGGCTATCTTAAATCATTCACATAT  739

seq1  TACTTTAAGGTGCTGTGGTAGTAGTATCCAGAGATTTGATGAAAATGTTA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAGGTGCTGTGGTAGTAGTATCCAGAGATTTGATGAAAATGTTA  789

seq1  GTTTGCTAAGTTTCTCTTTTAAAATGGCTAAAATTGATGGCTTAAAAGTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTAAGTTTCTCTTTTAAAATGGCTAAAATTGATGGCTTAAAAGTA  839

seq1  ATTAAATATTTTTGGTTGTCTTTGAGTTTGCAGAAAAATCAAATCTTCAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATATTTTTGGTTGTCTTTGAGTTTGCAGAAAAATCAAATCTTCAG  889

seq1  ATTTCTTGTTTCATAAGGTTTAGGGGTGTCTATGTATCACTTAAATGTAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGTTTCATAAGGTTTAGGGGTGTCTATGTATCACTTAAATGTAT  939

seq1  AAGATAGAAATCAGAAGAACCAGGGAGGCAAGTCCTTTATTTTGGTAAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGAAATCAGAAGAACCAGGGAGGCAAGTCCTTTATTTTGGTAAAA  989

seq1  GATACACATGACAATACCATGCTTCTTGACACAATTAATCAGGTTAGATA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACACATGACAATACCATGCTTCTTGACACAATTAATCAGGTTAGATA  1039

seq1  TATTGATGTATTTCATAACTTTCTAAAATAACAAAGTAATAAACATATAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGATGTATTTCATAACTTTCTAAAATAACAAAGTAATAAACATATAA  1089

seq1  AATTTATTCCTTGAATATTTCTCTTCATTCATCTTCTTTTTTCAAATATA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTCCTTGAATATTTCTCTTCATTCATCTTCTTTTTTCAAATATA  1139

seq1  TTTGATATTGAATTC  1162
      |||||||||||||||
seq2  TTTGATATTGAATTC  1154