BAC Information

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BAC

Clone NameB6Ng01-103G14
Chromosome9 (Build37)
Map Location 86,521,232 - 86,522,384
singlet/doubletsinglet
Overlap geneMod1
Upstream geneIbtk, 4933431K14Rik, EG434426, 9330154J02Rik, Tpbg, 2610018I03Rik, Pgm3, Rwdd2
Downstream genePrss35, Snap91, C030002E08Rik, Cyb5r4, LOC666777, LOC244958, LOC100039510, 4922501C03Rik, LOC671706
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103G14.bB6Ng01-103G14.g
ACCDH912008DH912009
length1,1591,151
definitionDH912008|Mus musculus domesticus DNA, BAC clone: B6Ng01-103G14, 5' end.DH912009|Mus musculus domesticus DNA, BAC clone: B6Ng01-103G14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacgtgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggcaaagatcaaaaactcaggtgacagc
agatgctggtgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccgaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataatagccaggagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaag
gaacttgcacaatatgtactcactgataagtggatattagcccagaaact
taggattcccaagatataagatacaacttgccaaacgcatgaaattcaag
aagaacgaagaccaaagtgtggacactttaccctttcttagaaatgggaa
caaaatacccatagaaggagttacagagacaaaatttggagctgtgacga
aaggatggaccatctagtgattgccatatgcagggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagatttcactgaaa
ggacccagatatagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgatcacagtcagctattggatgggtcacacgcccctaa
tggagagctagagaaattacccaggagctaaagggaactgcaaccctata
gtggacacatatgactaccagtacccggagctcttgtctttagctgcata
tgtatcaaagatgctagtcgccatcactgcaagagagctatgacttgcaa
ctttatatgcccagtaagggacgccaggccaaaagggtagtggggtggtg
tagggaata
gaattccagcacttgggaggcagaggaggaggcagaggcagaggaggcag
gtggatttctgagtttaaggctaccttgatctacagagtaagttctagga
cagccagggatacacagagaaaccctgttcaaaagcaagcaagcaaacaa
acaaaaaatcaaacaacaacaaaacccaaaaagacaaaaaggagaaaaga
aaaacaaacacagagagagagagagagacagacagacagacagacagaca
gacagacattgatggtaacttctatgaaagatcaagtgtgggttgatttc
agccagcattgaacatttggaggagaaaactgggcagggagtgcctcaaa
ctgtgatatatgtatgtggcagatttcagacagcacagtagggatttctt
gaccaaagagaggctccttagatgagttccatgctgggtaggagcgatgc
tggccccattcccagtgctgggcctagcaactgcctgacggctcctcagg
aagacggctgggctcgaatgcggccacggatcttacatgcatcagggcat
gagaagtgggggtgggaagaccaattcagggttgttctagctatgtaatg
agtttgagatcagcctaagatacatgacaccacatctcaaaaacaaaaca
aatagaagaaaatgccttatagctggagatgaggttctgatatactccat
ggtaagttctttgatgaagggcattctgaggctgcctagcatcttagtgc
cattcacagataccagatgccaattatatccaccagatttccagaaaagt
gaaggcagagaacacagatgctaggatgcaaaagccaatttttcacagtg
cttttaggaggatacatccatgagtcactgtaggattacagtgaagttac
tagcgcagcactttgtacccagggaaactcctccttaagaagacatgagc
aggcatttcacagcagcattgtttatagaacgaaaagctgacaatagttt
aaattgacgtgacagcgactggactgaatagttgttacacaatgcagtat
gtagtggatatagcacagagctaatgcttcattgcagccacttggtaccc
cacaggaagacatcttaactgctcctctttgtgtattataaatagcacca
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_86521232_86522384
seq2: B6Ng01-103G14.g_68_1218 (reverse)

seq1  ATGGTGCTATTAATAATA-ACATAAGAGGAGCAGTTAAGATGTCTTCCTG  49
      ||||||||||| |||||| ||| |||||||||||||||||||||||||||
seq2  ATGGTGCTATTTATAATACACA-AAGAGGAGCAGTTAAGATGTCTTCCTG  49

seq1  TGGTGTACCCAAGTGGCTGC-ATGAAGCACTAGCTCTGTGCTATAT-CAC  97
      ||| ||| |||||||||||| |||||||| |||||||||||||||| |||
seq2  TGGGGTA-CCAAGTGGCTGCAATGAAGCATTAGCTCTGTGCTATATCCAC  98

seq1  TACATACTGCAATGTGTGACAACTTATTCAGTCCAGTCGCCTGTTCACGT  147
      ||||||||||| ||||| ||||| ||||||||||||||| ||| ||||||
seq2  TACATACTGCATTGTGTAACAAC-TATTCAGTCCAGTCG-CTG-TCACGT  145

seq1  CAATTTAAACTATTGTCAGCTTTTCGTTCTATAAACAATGCTGCTGTGAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTAAACTATTGTCAGCTTTTCGTTCTATAAACAATGCTGCTGTGAA  195

seq1  ATGCCTGCTCATGTCTTCTTAAGGAGGAGTTTCCCTGGGTACAAAGTGCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTGCTCATGTCTTCTTAAGGAGGAGTTTCCCTGGGTACAAAGTGCT  245

seq1  GCGCTAGTAACTTCACTGTAATCCTACAGTGACTCATGGATGTATCCTCC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTAGTAACTTCACTGTAATCCTACAGTGACTCATGGATGTATCCTCC  295

seq1  TAAAAGCACTGTGAAAAATTGGCTTTTGCATCCTAGCATCTGTGTTCTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCACTGTGAAAAATTGGCTTTTGCATCCTAGCATCTGTGTTCTCT  345

seq1  GCCTTCACTTTTCTGGAAATCTGGTGGATATAATTGGCATCTGGTATCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCACTTTTCTGGAAATCTGGTGGATATAATTGGCATCTGGTATCTG  395

seq1  TGAATGGCACTAAGATGCTAGGCAGCCTCAGAATGCCCTTCATCAAAGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGCACTAAGATGCTAGGCAGCCTCAGAATGCCCTTCATCAAAGAA  445

seq1  CTTACCATGGAGTATATCAGAACCTCATCTCCAGCTATAAGGCATTTTCT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACCATGGAGTATATCAGAACCTCATCTCCAGCTATAAGGCATTTTCT  495

seq1  TCTATTTGTTTTGTTTTTGAGATGTGGTGTCATGTATCTTAGGCTGATCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTGTTTTGTTTTTGAGATGTGGTGTCATGTATCTTAGGCTGATCT  545

seq1  CAAACTCATTACATAGCTAGAACAACCCTGAATTGGTCTTCCCACCCCCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCATTACATAGCTAGAACAACCCTGAATTGGTCTTCCCACCCCCA  595

seq1  CTTCTCATGCCCTGATGCATGTAAGATCCGTGGCCGCATTCGAGCCCAGC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCATGCCCTGATGCATGTAAGATCCGTGGCCGCATTCGAGCCCAGC  645

seq1  CGTCTTCCTGAGGAGCCGTCAGGCAGTTGCTAGGCCCAGCACTGGGAATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCTTCCTGAGGAGCCGTCAGGCAGTTGCTAGGCCCAGCACTGGGAATG  695

seq1  GGGCCAGCATCGCTCCTACCCAGCATGGAACTCATCTAAGGAGCCTCTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGCATCGCTCCTACCCAGCATGGAACTCATCTAAGGAGCCTCTCT  745

seq1  TTGGTCAAGAAATCCCTACTGTGCTGTCTGAAATCTGCCACATACATATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTCAAGAAATCCCTACTGTGCTGTCTGAAATCTGCCACATACATATA  795

seq1  TCACAGTTTGAGGCACTCCCTGCCCAGTTTTCTCCTCCAAATGTTCAATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGTTTGAGGCACTCCCTGCCCAGTTTTCTCCTCCAAATGTTCAATG  845

seq1  CTGGCTGAAATCAACCCACACTTGATCTTTCATAGAAGTTACCATCAATG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGAAATCAACCCACACTTGATCTTTCATAGAAGTTACCATCAATG  895

seq1  TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTGTGTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTGTGTT  945

seq1  TGTTTTTCTTTTCTCCTTTTTGTCTTTTTGGGTTTTGTTGTTGTTTGATT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCTTTTCTCCTTTTTGTCTTTTTGGGTTTTGTTGTTGTTTGATT  995

seq1  TTTTGTTTGTTTGCTTGCTTGCTTTTGAACAGGGTTTCTCTGTGTATCCC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTGTTTGCTTGCTTGCTTTTGAACAGGGTTTCTCTGTGTATCCC  1045

seq1  TGGCTGTCCTAGAACTTACTCTGTAGATCAAGGTAGCCTTAAACTCAGAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCCTAGAACTTACTCTGTAGATCAAGGTAGCCTTAAACTCAGAA  1095

seq1  ATCCACCTGCCTCCTCTGCCTCTGCCTCCTCCTCTGCCTCCCAAGTGCTG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCTGCCTCCTCTGCCTCTGCCTCCTCCTCTGCCTCCCAAGTGCTG  1145

seq1  GAATTC  1153
      ||||||
seq2  GAATTC  1151