BAC Information

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BAC

Clone NameB6Ng01-103I13
Chromosome9 (Build37)
Map Location 38,659,894 - 38,787,826
singlet/doubletdoublet
Overlap geneOlfr26, Olfr925-ps1, Olfr926, GA_x5J8B7W60AJ-719102-719883, Olfr928-ps1, GA_x5J8B7W60AJ-703922-704828, Olfr930, GA_x5J8B7W60AJ-666029-666595, Olfr1545-ps1, Olfr932-ps1, Olfr933
Upstream geneOlfr877, Olfr145, EG627852, Olfr878, GA_x5J8B7W60AJ-1667802-1666911, Olfr880-ps1, Olfr881, Olfr882-ps1, Olfr883, Olfr884, Olfr1550-ps1, Olfr885, Olfr886-ps1, Olfr887, Olfr888, Olfr889, Olfr890, Olfr891, Olfr892-ps1, Olfr893, Olfr894, Olfr143, Olfr895, Olfr896-ps1, Olfr897-ps1, Olfr25, Olfr898, Olfr899, Olfr900, Olfr147, Olfr901, Olfr902, Olfr903-ps1, Olfr904, Olfr905, Olfr906, Olfr907, Olfr908, Olfr909, Olfr910, Olfr912, Olfr913, Olfr914, Olfr915, Olfr916, Olfr917, Olfr918, GA_x5J8B7W60AJ-925630-926226, Olfr919, Loh11cr2a, Olfr920, Olfr921, Olfr922, Olfr923, Olfr924
Downstream geneOlfr934, Olfr935, Olfr146, EG628171, Olfr937, LOC667260, Olfr938, Olfr939-ps1, GA_x5J8B7W60AJ-540286-540740, Olfr941-ps1, Olfr27, Olfr942-ps1, Olfr943, Olfr944, Olfr144, Olfr945, GA_x5J8B7W60AJ-354484-355428, Olfr947-ps1, Olfr948, LOC667312, Olfr949-ps1, Olfr950-ps1, Olfr951, Olfr952, Olfr953-ps1, Olfr954, Olfr955, Olfr956-ps1, Olfr44, Olfr957, Olfr958, Olfr959, AW551984, Olfr148, Olfr960, Olfr961, GA_x5J8B7W60AJ-4787-4010, Olfr963, Olfr964-ps1, Olfr149, Olfr965, Olfr966-ps1, Olfr150, Olfr967, Olfr968, Olfr969, Olfr970, Olfr971, Olfr972, Olfr973, LOC100043015, Olfr974, Olfr975, Olfr976, Olfr977-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103I13.bB6Ng01-103I13.g
ACCDH912091DH912092
length1,1351,200
definitionDH912091|Mus musculus domesticus DNA, BAC clone: B6Ng01-103I13, 5' end.DH912092|Mus musculus domesticus DNA, BAC clone: B6Ng01-103I13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,786,695 - 38,787,826)(38,659,894 - 38,661,130)
sequence
gaattcacttagctctatgtaagaacagctaatgaaaaatagattccatg
aactagaaaaagaataagtagggccataaaggtgggtttggggagaggga
aaaagggggaggggaaatgatataattataatataatcatgaaaagtata
ataaataatttcaaaaaacattcattaaagaatgaagtatgatataagca
gtgctttctattcactgaacaaataaacattaatggagtgcttgctcact
aatgggatgctaaaaaatggaaaccaaatgctgattaatgaactgttagg
aaacagtactgacagtgggcagatcacagagatggcaaaaccctgtcaaa
ggctaccttgtcttagatgccttctctagtcccaaaataaaatggcttgg
ttctataacatgtaccaaaaaaaaaaaaaaaaacccaaaaacaaaaaaca
aaaaacaaaaaaaaccaaacaaacaaaaaaacaaaaccaaaatcaaacat
ataatcatataatgtatttggtaggtagaagaagttatctattttgcttc
actgtcacaatttatgagaattatattgtactcagtaacttgggtataat
aatatttttgcttaaaaacatctttcaaatttttactaaaattcttttta
gaaatatagatgaaagttttgtgatacatcaaacctttaatctagatctc
aaatttggagctttccttaagtatctatattctctaaatgtttgtaaaaa
taagaattattaataaaaatttctattctaaaattaataatctgttaatt
cataacagaatcttatggttataggtagtatacttattcatttatgccaa
aagaataaatctttcatgaatctgattcataacaaatcacaccaatagtc
aatagttgggaagagacatgtggggtcttttgagtatacccctgcctgat
tcaattataaaccagtgttgtcaatatgaacacaactgatacaattagga
taaatattattgagcacataacacattttgtatcttttatcattggaaga
gccaattcccaaaagcatgtaaagaccatcatttaaattgaataccatca
aaatagcccataaaaaatggaatttggctttaaat
gaattccctgcttacttgtttattttgaatgaatagagcctttcagagca
caaggagatagatctttaatctatccattgtatgcatctctccttcattt
cctcctggcctcagaatccccagacagagtacattctacaatgtcacaat
atctcccaggcctccagatcagtacttggtaattctcacatcagtctgaa
ataaaaaacttagaaaatgtataaaatccaaataatctcaaatgttaata
tattttcatcactcacaagtaggtaaagaatttgggatgaacaaaaagta
cacatttctttattcctcattccaagctggtacattttcacgtcttcaca
ttgtatgaccatactctagtttttaaatgtatgttgaatattgattcttg
gtttatatagtgaatatttagattcattctcattctcacttcatattaaa
actcattaaatgactgggccaaaatagcaaactaacaagcaacgaagtca
gcctttttaatgaagatttattgatgctaaatctattcacaatgtctaca
tacttttctgaaaattagataaaactctgaagtaaagtactcattacaga
tattgttgttttggtgtttgaagactttctagaatgaactccattctgag
gtttttcactttaaggagaccccagcctctcctcttgaacataatctaga
attgcccttctgagaagctttaaaaagtgggactattctttaacagcaac
aacaaaaaaatgtcacagtgacaatccctcatcctttcaggatttttgtt
aattagatgacagatatctgtaaaatactaactagttgttatgtaaaacc
tgtgaaagagttgttctggaaccatataacaggactagagtagagagtat
acgcttaaattgtactaatctctattacttcatcagaagtatataacctt
tcagagctagggtatttatgtcataatgaaggtaagaagatgaattcaac
atgtatgtgtgcagaagagagatagaaaaatgagatgagagagagataga
gagggttaccttatctccaccattcatttcttaatggaaaaatgtacttg
gcacacattactgcaactaaatgcttctaacagtacaatccacttgaatg
tgaacaggcaggttgtggcccaccttaatcccagcactttggaggcagag

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_38786695_38787826
seq2: B6Ng01-103I13.b_46_1180 (reverse)

seq1  ATTTAAAGCCAAAATTCGATTTTTTAT-GGCTATTTTGATGTTA-TCAAT  48
      |||||||||| |||||| ||||||||| ||||||||||||| || |||||
seq2  ATTTAAAGCC-AAATTCCATTTTTTATGGGCTATTTTGATGGTATTCAAT  49

seq1  TTTAATGTATGTCTATTACATGCTTTTGGAATTTGCGTCTTCCAATGATA  98
      || ||||   |||| |||||||||||||| | |||  |||||||||||||
seq2  TTAAATGATGGTCT-TTACATGCTTTTGGGAATTGGCTCTTCCAATGATA  98

seq1  AAAGATACAAAATGTGTTATGTGCTCAATAATTATTTAT-CTTATTGTAT  147
      ||||||||||||||||||||||||||||||| ||||||| || |||||||
seq2  AAAGATACAAAATGTGTTATGTGCTCAATAA-TATTTATCCTAATTGTAT  147

seq1  CAGTTGTGTTCATATTGACAACACTGGTTAATAATTGAATCAGGCAGGGG  197
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGTTGTGTTCATATTGACAACACTGGTTTATAATTGAATCAGGCAGGGG  197

seq1  TATACTCAAAAGACCCCACATGTCTCTT-CCAACTATTGACTATTGGTGT  246
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TATACTCAAAAGACCCCACATGTCTCTTCCCAACTATTGACTATTGGTGT  247

seq1  GATTTGTTATGAATCAGATTCATG-AAGATTTATTCTTTT-GCATTAATG  294
      |||||||||||||||||||||||| ||||||||||||||| |||| ||||
seq2  GATTTGTTATGAATCAGATTCATGAAAGATTTATTCTTTTGGCATAAATG  297

seq1  AATAAGTATACTACCTATAACCATAAGATTCTGTTATGAATTAACAGATT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAGTATACTACCTATAACCATAAGATTCTGTTATGAATTAACAGATT  347

seq1  ATTAATTTTAGAATAGAAATTTTTATTAATAATTCTTATTTTTACAAACA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTTTAGAATAGAAATTTTTATTAATAATTCTTATTTTTACAAACA  397

seq1  TTTAGAGAATATAGATACTTAAGGAAAGCTCCAAATTTGAGATCTAGATT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAGAATATAGATACTTAAGGAAAGCTCCAAATTTGAGATCTAGATT  447

seq1  AAAGGTTTGATGTATCACAAAACTTTCATCTATATTTCTAAAAAGAATTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTTGATGTATCACAAAACTTTCATCTATATTTCTAAAAAGAATTT  497

seq1  TAGTAAAAATTTGAAAGATGTTTTTAAGCAAAAATATTATTATACCCAAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAAAAATTTGAAAGATGTTTTTAAGCAAAAATATTATTATACCCAAG  547

seq1  TTACTGAGTACAATATAATTCTCATAAATTGTGACAGTGAAGCAAAATAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAGTACAATATAATTCTCATAAATTGTGACAGTGAAGCAAAATAG  597

seq1  ATAACTTCTTCTACCTACCAAATACATTATATGATTATATGTTTGATTTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTTCTTCTACCTACCAAATACATTATATGATTATATGTTTGATTTT  647

seq1  GGTTTTGTTTTTTTGTTTGTTTGGTTTTTTTTGTTTTTTGTTTTTTGTTT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGTTTTTTTGTTTGTTTGGTTTTTTTTGTTTTTTGTTTTTTGTTT  697

seq1  TTGGGTTTTTTTTTTTTTTTTTGGTACATGTTATAGAACCAAGCCATTTT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTTTTTTTTTTTTTTTTTGGTACATGTTATAGAACCAAGCCATTTT  747

seq1  ATTTTGGGACTAGAGAAGGCATCTAAGACAAGGTAGCCTTTGACAGGGTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGGACTAGAGAAGGCATCTAAGACAAGGTAGCCTTTGACAGGGTT  797

seq1  TTGCCATCTCTGTGATCTGCCCACTGTCAGTACTGTTTCCTAACAGTTCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATCTCTGTGATCTGCCCACTGTCAGTACTGTTTCCTAACAGTTCA  847

seq1  TTAATCAGCATTTGGTTTCCATTTTTTAGCATCCCATTAGTGAGCAAGCA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCAGCATTTGGTTTCCATTTTTTAGCATCCCATTAGTGAGCAAGCA  897

seq1  CTCCATTAATGTTTATTTGTTCAGTGAATAGAAAGCACTGCTTATATCAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTAATGTTTATTTGTTCAGTGAATAGAAAGCACTGCTTATATCAT  947

seq1  ACTTCATTCTTTAATGAATGTTTTTTGAAATTATTTATTATACTTTTCAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATTCTTTAATGAATGTTTTTTGAAATTATTTATTATACTTTTCAT  997

seq1  GATTATATTATAATTATATCATTTCCCCTCCCCCTTTTTCCCTCTCCCCA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATATTATAATTATATCATTTCCCCTCCCCCTTTTTCCCTCTCCCCA  1047

seq1  AACCCACCTTTATGGCCCTACTTATTCTTTTTCTAGTTCATGGAATCTAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCACCTTTATGGCCCTACTTATTCTTTTTCTAGTTCATGGAATCTAT  1097

seq1  TTTTCATTAGCTGTTCTTACATAGAGCTAAGTGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTAGCTGTTCTTACATAGAGCTAAGTGAATTC  1135

seq1: chr9_38659894_38661130
seq2: B6Ng01-103I13.g_70_1269

seq1  GAATTCCCTGCTTACTTGTTTATTTTGAATGAATAGAGCCTTTCAGAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGCTTACTTGTTTATTTTGAATGAATAGAGCCTTTCAGAGCA  50

seq1  CAAGGAGATAGATCTTTAATCTATCCATTGTATGCATCTCTCCTTCATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAGATAGATCTTTAATCTATCCATTGTATGCATCTCTCCTTCATTT  100

seq1  CCTCCTGGCCTCAGAATCCCCAGACAGAGTACATTCTACAATGTCACAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGCCTCAGAATCCCCAGACAGAGTACATTCTACAATGTCACAAT  150

seq1  ATCTCCCAGGCCTCCAGATCAGTACTTGGTAATTCTCACATCAGTCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCCAGGCCTCCAGATCAGTACTTGGTAATTCTCACATCAGTCTGAA  200

seq1  ATAAAAAACTTAGAAAATGTATAAAATCCAAATAATCTCAAATGTTAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAACTTAGAAAATGTATAAAATCCAAATAATCTCAAATGTTAATA  250

seq1  TATTTTCATCACTCACAAGTAGGTAAAGAATTTGGGATGAACAAAAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCATCACTCACAAGTAGGTAAAGAATTTGGGATGAACAAAAAGTA  300

seq1  CACATTTCTTTATTCCTCATTCCAAGCTGGTACATTTTCACGTCTTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCTTTATTCCTCATTCCAAGCTGGTACATTTTCACGTCTTCACA  350

seq1  TTGTATGACCATACTCTAGTTTTTAAATGTATGTTGAATATTGATTCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGACCATACTCTAGTTTTTAAATGTATGTTGAATATTGATTCTTG  400

seq1  GTTTATATAGTGAATATTTAGATTCATTCTCATTCTCACTTCATATTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATATAGTGAATATTTAGATTCATTCTCATTCTCACTTCATATTAAA  450

seq1  ACTCATTAAATGACTGGGCCAAAATAGCAAACTAACAAGCAACGAAGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTAAATGACTGGGCCAAAATAGCAAACTAACAAGCAACGAAGTCA  500

seq1  GCCTTTTTAATGAAGATTTATTGATGCTAAATCTATTCACAATGTCTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTTAATGAAGATTTATTGATGCTAAATCTATTCACAATGTCTACA  550

seq1  TACTTTTCTGAAAATTAGATAAAACTCTGAAGTAAAGTACTCATTACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTCTGAAAATTAGATAAAACTCTGAAGTAAAGTACTCATTACAGA  600

seq1  TATTGTTGTTTTGGTGTTTGAAGACTTTCTAGAATGAACTCCATTCTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTGTTTTGGTGTTTGAAGACTTTCTAGAATGAACTCCATTCTGAG  650

seq1  GTTTTTCACTTTAAGGAGACCCCAGCCTCTCCTCTTGAACATAATCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCACTTTAAGGAGACCCCAGCCTCTCCTCTTGAACATAATCTAGA  700

seq1  ATTGCCCTTCTGAGAAGCTTTAAAAAGTGGGACTATTCTTTAACAGCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCCTTCTGAGAAGCTTTAAAAAGTGGGACTATTCTTTAACAGCAAC  750

seq1  AACAAAAAAATGTCACAGTGACAATCCCTCATCCTTTCAGGATTTTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAATGTCACAGTGACAATCCCTCATCCTTTCAGGATTTTTGTT  800

seq1  AATTAGATGACAGATATCTGTAAAATACTAACTAGTTGTTATGTAAAACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGATGACAGATATCTGTAAAATACTAACTAGTTGTTATGTAAAACC  850

seq1  TGTGAAAGAGTTGTTCTGGAACCATATAACAGGACTAGAGTAGAGAGTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAAGAGTTGTTCTGGAACCATATAACAGGACTAGAGTAGAGAGTAT  900

seq1  ACGCTTAAATTGTACTAATCTCTATTACTTCATCAGAAGTATATAACCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTTAAATTGTACTAATCTCTATTACTTCATCAGAAGTATATAACCTT  950

seq1  TCAAGAGCTAGGGTATTTAATGTCATAATGAAGGTAAAGAAGATGAATTC  1000
      || ||||||||||||||| |||||||||||||||| ||||||||||||||
seq2  TC-AGAGCTAGGGTATTT-ATGTCATAATGAAGGT-AAGAAGATGAATTC  997

seq1  AACATGTAATGTGTGCAGAAGGAAGAGATAGGAAAAAGGGAGATGAAGAA  1050
      ||||||| |||||||||||||  ||||||||  ||||  ||||||    |
seq2  AACATGT-ATGTGTGCAGAAG--AGAGATAG--AAAAATGAGATG----A  1038

seq1  GAGAG-GATAGGAAGAGGGTAACCCTTATCTCCACCCATCATTTCTTAAT  1099
      ||||| |||||  ||||||| | |||||||||||||  ||||||||||||
seq2  GAGAGAGATAG--AGAGGGTTA-CCTTATCTCCACCATTCATTTCTTAAT  1085

seq1  GGAAAAATAATTGTACTCTGACAACACA-TACTGCAACCTAAAATGTCTC  1148
      |||||||    |||||| || | ||||| |||||||||   |||||  ||
seq2  GGAAAAA----TGTACT-TGGC-ACACATTACTGCAAC--TAAATGCTTC  1127

seq1  CATAACAAAGGTACATCACACTTGAAAATGGTGGACCCATGCCAGGTGTT  1198
        |||||   |||||   ||||||||    ||| ||    | |||  |||
seq2  --TAACA---GTACAATCCACTTGAA---TGTGAAC---AGGCAG--GTT  1164

seq1  GTGGCACACACCTTTAATCCCAGCACTTGGGAGGCAGAG  1237
      ||||| ||   | ||||||||||||||| ||||||||||
seq2  GTGGCCCA---CCTTAATCCCAGCACTTTGGAGGCAGAG  1200