BAC Information

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BAC

Clone NameB6Ng01-106E23
Chromosome9 (Build37)
Map Location 22,408,851 - 22,409,949
singlet/doubletsinglet
Overlap geneBbs9
Upstream geneEG666043, Smarca4, Ldlr, Spc24, Ankrd25, Dock6, EG624219, Rab3d, BC010787, 2510048L02Rik, BC018242, 2310047B19Rik, Epor, Rgl3, C330001K17Rik, Prkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik, rp9, LOC100041870, LOC100040805
Downstream geneBmper
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106E23.bB6Ng01-106E23.g
ACCDH914086DH914087
length1,1901,088
definitionDH914086|Mus musculus domesticus DNA, BAC clone: B6Ng01-106E23, 5' end.DH914087|Mus musculus domesticus DNA, BAC clone: B6Ng01-106E23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ccaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactgggtgtatcatgtagaagaatgcgaatcgatccatacttatct
cgtgtactaggtcaaatctaagtggatcaaggacttcacataaacagaga
cactgaaactatagagagaaagtgggaaagcttgagatatggcacaggaa
aatctgaacagaacagcatgctgtgctgtagatcgagattgcaaatggac
tattgactcaaggttctcgcaaggcaaaagacacctgtgt
gaattcaacttggtgtgtgtatgtctgtgtatatgtgtgtgtgtatgatt
gcacatgtgcatgcctgaactaatgtgtgaaggtcagaggacaacttgta
tgagatgtttcttttttataccatgtaggttctggggattttaggttttc
aggtttctcatgcaggcatgtttatatgctgatcgatcttgcctgcctct
taaattcttttaactttaattttcagtacttttattagggtagactgaag
ggttatatgtttattctcaggttgctactttctataatccttttaaaaag
agaataaaaaagactggagcattaacttattgttttaagagcatattgtt
actctttataaattaaacatatctgcacacatacaccgcacagcctgggt
ttggaagtcagaagacactttggggagttgattctctctttctattatgg
gttctagggatagaactcaggttatgcggtttgcaagtcaaggactttca
tcaggtgggcatttctctgctccctggttcctcttttcggtagttttaca
tgttctttattaacattgacttataattaccgtgcctccatgtgctgtcc
aagctgaccttggttcatgcctgttctcctgacttgtatttctaagtgct
gccgtgctaggcaaacatgggttcttaacaggagggtggcagtcatggag
gaagccagccagaaaggccaaggaaagtataatcgtctccttttccttta
tacggggctgtccttgcttattgttaataccatgaaaagaaattattgcc
tattacagttgaggaaaatgtaacatagactcgttagcctcctctttgtt
ctttgtaatttcatgattatgcatgtcacacaccctcgcccccctgcact
cctcctccagtgtgttttgaacacagggtatagttgtttgaggcgcagat
attcgaatacttggtcctcagttggtgaactgtttgaaaaagtttagggg
atgtggtcttgctagagatgtatataactaggccagacttgatcttgaag
tttttcctgtttcctgcctactgttacttgaatgttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_22408851_22409949
seq2: B6Ng01-106E23.g_66_1153

seq1  GAATTCAACTTGGTGTGTGTATGTCTGTGTATATGTGTGTGTGTATGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTTGGTGTGTGTATGTCTGTGTATATGTGTGTGTGTATGATT  50

seq1  GCACATGTGCATGCCTGAACTAATGTGTGAAGGTCAGAGGACAACTTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGTGCATGCCTGAACTAATGTGTGAAGGTCAGAGGACAACTTGTA  100

seq1  TGAGATGTTTCTTTTTTATACCATGTAGGTTCTGGGGATTTTAGGTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATGTTTCTTTTTTATACCATGTAGGTTCTGGGGATTTTAGGTTTTC  150

seq1  AGGTTTCTCATGCAGGCATGTTTATATGCTGATCGATCTTGCCTGCCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTCATGCAGGCATGTTTATATGCTGATCGATCTTGCCTGCCTCT  200

seq1  TAAATTCTTTTAACTTTAATTTTCAGTACTTTTATTAGGGTAGACTGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCTTTTAACTTTAATTTTCAGTACTTTTATTAGGGTAGACTGAAG  250

seq1  GGTTATATGTTTATTCTCAGGTTGCTACTTTCTATAATCCTTTTAAAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATATGTTTATTCTCAGGTTGCTACTTTCTATAATCCTTTTAAAAAG  300

seq1  AGAATAAAAAAGACTGGAGCATTAACTTATTGTTTTAAGAGCATATTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAAAAGACTGGAGCATTAACTTATTGTTTTAAGAGCATATTGTT  350

seq1  ACTCTTTATAAATTAAACATATCTGCACACATACACCGCACAGCCTGGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTATAAATTAAACATATCTGCACACATACACCGCACAGCCTGGGT  400

seq1  TTGGAAGTCAGAAGACACTTTGGGGAGTTGATTCTCTCTTTCTATTATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGTCAGAAGACACTTTGGGGAGTTGATTCTCTCTTTCTATTATGG  450

seq1  GTTCTAGGGATAGAACTCAGGTTATGCGGTTTGCAAGTCAAGGACTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGGGATAGAACTCAGGTTATGCGGTTTGCAAGTCAAGGACTTTCA  500

seq1  TCAGGTGGGCATTTCTCTGCTCCCTGGTTCCTCTTTTCGGTAGTTTTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGTGGGCATTTCTCTGCTCCCTGGTTCCTCTTTTCGGTAGTTTTACA  550

seq1  TGTTCTTTATTAACATTGACTTATAATTACCGTGCCTCCATGTGCTGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTTATTAACATTGACTTATAATTACCGTGCCTCCATGTGCTGTCC  600

seq1  AAGCTGACCTTGGTTCATGCCTGTTCTCCTGACTTGTATTTCTAAGTGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGACCTTGGTTCATGCCTGTTCTCCTGACTTGTATTTCTAAGTGCT  650

seq1  GCCGTGCTAGGCAAACATGGGTTCTTAACAGGAGGGTGGCAGTCATGGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTGCTAGGCAAACATGGGTTCTTAACAGGAGGGTGGCAGTCATGGAG  700

seq1  GAAGCCAGCCAGAAAGGCCAAGGAAAGTATAATCGTCTCCTTTTCCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCAGCCAGAAAGGCCAAGGAAAGTATAATCGTCTCCTTTTCCTTTA  750

seq1  TACGGGGCTGTCCTTGCTTATTGTTAATACCATGAAAAGAAATTATTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGGGCTGTCCTTGCTTATTGTTAATACCATGAAAAGAAATTATTGCC  800

seq1  TATTACAGTTGAGGAAAATGTAACATAGACTCGTTAGCCTCCTCTTTGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACAGTTGAGGAAAATGTAACATAGACTCGTTAGCCTCCTCTTTGTT  850

seq1  CTTTGTAATTTCATGATTATGCATGTCACACACCCTCGCCCCCCTGCACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAATTTCATGATTATGCATGTCACACACCCTCGCCCCCCTGCACT  900

seq1  CCTCCTCCAGTGTGTTTTGAACACAGGGTATAGTTGTTTGAAGGCGCAGA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CCTCCTCCAGTGTGTTTTGAACACAGGGTATAGTTGTTTG-AGGCGCAGA  949

seq1  TATTCGAATACTTGGTCCCCAGTTGGTGGAACTGTTTGAAAAAGGTTTAG  1000
      |||||||||||||||||| |||||||| ||||||||||||||| ||||||
seq2  TATTCGAATACTTGGTCCTCAGTTGGT-GAACTGTTTGAAAAA-GTTTAG  997

seq1  GGGATGTGGTCTTGCTAGAGGATGTATATAACTAGGGCCAGACTTTGATT  1050
      ||||||||||||||||||| |||||||||||||| |||||||| ||||| 
seq2  GGGATGTGGTCTTGCTAGA-GATGTATATAACTA-GGCCAGAC-TTGAT-  1043

seq1  CTTTGTAGTTTTTCCTGGTTCCTG-CTACATGTTTACATTTGAATGTTAA  1099
        ||| ||||||||||| |||||| |||| ||||   | |||||||||||
seq2  -CTTGAAGTTTTTCCTGTTTCCTGCCTAC-TGTT---ACTTGAATGTTAA  1088