BAC Information

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BAC

Clone NameB6Ng01-107D10
Chromosome9 (Build37)
Map Location 77,396,658 - 77,577,498
singlet/doubletdoublet
Overlap geneKlhl31
Upstream geneTinag, LOC436082, 2310046A06Rik, 5730403I07Rik, Lrrc1
Downstream geneGclc, LOC100042212, Elovl5, Gcm1, LOC666353, Fbxo9, Ick, C920006O11Rik, Gsta4, LOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107D10.bB6Ng01-107D10.g
ACCDH914737DH914738
length268942
definitionDH914737|Mus musculus domesticus DNA, BAC clone: B6Ng01-107D10, 5' end.DH914738|Mus musculus domesticus DNA, BAC clone: B6Ng01-107D10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(77,396,658 - 77,396,925)(77,576,756 - 77,577,498)
sequence
aacaatcttcataatcagaagcaaatttaagtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtaccacacttgagtatcacaattca
ggttatcaggcttggagtcataacccactgaccctggccccttcccttgt
ttttccattgaaacatttattaaatttacacttgaggtagtcaggaaaca
ttgaacttaggttttccgtttttgtttttgttttctgttgatgccatctg
tttctcctcatttcttcc
gaattccaggcaatgagtcgtggagtttgagaactcagaaaggacacctg
gactctattgagattttaatcaaccgaattttatttaagttgcaactcac
cacaattttcttggtaggatttgggactgtagacctggctggagccagat
tgggggttttaaaggcaaaagccacagttcattcctatggacatgcactt
ctgtaggtgaaattcctgcagacataatccttcaacagactggagataac
acctcagatcttttgccttcctggaattcctggaatgttttaagagactc
aagttgttgacaggactggtctttaggatgtgtcttagtcagggtttcta
ttcctgcacaaacatcatgaccaacaagcaagttggggaggaaagggttt
attcggcttacacttccatactgctgttcatcaccaaggaagtcaggact
ggaactcaagcaggtcaggaagcaggagctgatgcagaggccatggaggg
atgttctttactggcttgcttctcctggcttgctcagcctgctctcttat
agaacctaagactaccagcccagagatggcaccacccacaaggggacctc
ccaccttgatcactaatttagaaaatgctttgcagctggatctcatggag
gcatttccccatctgaagctcctttctctgtgataaccccagcctgtgtc
aagttgacacaaaactcgccagtacaggatggttgctttgataaataaaa
cagaatagaacagaacaaaaccaaaccccagtcctttcagctgctctaca
atgactgctgaaagggagtattagtcttccctaatgggctatccaatgcc
aagtagccagcctcagaatcgcacacatgcaagcacattaaataggcccg
ataggttgtatttattcatcagtttacatggttgatttagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_77396658_77396925
seq2: B6Ng01-107D10.b_51_318

seq1  AACAATCTTCATAATCAGAAGCAAATTTAAGTGTGTGTGTGTGTGTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCTTCATAATCAGAAGCAAATTTAAGTGTGTGTGTGTGTGTGTGT  50

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTACCACACTTGAGTATCACAATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTACCACACTTGAGTATCACAATTCA  100

seq1  GGTTATCAGGCTTGGAGTCATTACCCACTGACCCTGGCCCCTTCCCTTGT  150
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGTTATCAGGCTTGGAGTCATAACCCACTGACCCTGGCCCCTTCCCTTGT  150

seq1  TTTTCCATTGAAACATTTATTAAATTTACACTTGAGGTAGTCAGGAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCATTGAAACATTTATTAAATTTACACTTGAGGTAGTCAGGAAACA  200

seq1  TTGAACTTAGGTTTTCCGTTTTAGTTTTTGTTTTCTGTTGATGCCATCTG  250
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGAACTTAGGTTTTCCGTTTTTGTTTTTGTTTTCTGTTGATGCCATCTG  250

seq1  TATCTCCTCATTTCTTCC  268
      | ||||||||||||||||
seq2  TTTCTCCTCATTTCTTCC  268

seq1: chr9_77576756_77577498
seq2: B6Ng01-107D10.g_68_810 (reverse)

seq1  TATCAAAGCAACCATCCTGTACTGGCGAGTTTTGTGTCAACTTGACACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGCAACCATCCTGTACTGGCGAGTTTTGTGTCAACTTGACACAG  50

seq1  GCTGGGGTTATCACAGAGAAAGGAGCTTCAGATGGGGAAATGCCTCCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGTTATCACAGAGAAAGGAGCTTCAGATGGGGAAATGCCTCCATG  100

seq1  AGATCCAGCTGCAAAGCATTTTCTAAATTAGTGATCAAGGTGGGAGGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCAGCTGCAAAGCATTTTCTAAATTAGTGATCAAGGTGGGAGGTCC  150

seq1  CCTTGTGGGTGGTGCCATCTCTGGGCTGGTAGTCTTAGGTTCTATAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGGGTGGTGCCATCTCTGGGCTGGTAGTCTTAGGTTCTATAAGAG  200

seq1  AGCAGGCTGAGCAAGCCAGGAGAAGCAAGCCAGTAAAGAACATCCCTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCTGAGCAAGCCAGGAGAAGCAAGCCAGTAAAGAACATCCCTCCA  250

seq1  TGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCTCTGCATCAGCTCCTGCTTCCTGACCTGCTTGAGTTCCAGTCCTG  300

seq1  ACTTCCTTGGTGATGAACAGCAGTATGGAAGTGTAAGCCGAATAAACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTTGGTGATGAACAGCAGTATGGAAGTGTAAGCCGAATAAACCCT  350

seq1  TTCCTCCCCAACTTGCTTGTTGGTCATGATGTTTGTGCAGGAATAGAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCCAACTTGCTTGTTGGTCATGATGTTTGTGCAGGAATAGAAAC  400

seq1  CCTGACTAAGACACATCCTAAAGACCAGTCCTGTCAACAACTTGAGTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTAAGACACATCCTAAAGACCAGTCCTGTCAACAACTTGAGTCTC  450

seq1  TTAAAACATTCCAGGAATTCCAGGAAGGCAAAAGATCTGAGGTGTTATCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATTCCAGGAATTCCAGGAAGGCAAAAGATCTGAGGTGTTATCT  500

seq1  CCAGTCTGTTGAAGGATTATGTCTGCAGGAATTTCACCTACAGAAGTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTGTTGAAGGATTATGTCTGCAGGAATTTCACCTACAGAAGTGCA  550

seq1  TGTCCATAGGAATGAACTGTGGCTTTTGCCTTTAAAACCCCCAATCTGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATAGGAATGAACTGTGGCTTTTGCCTTTAAAACCCCCAATCTGGC  600

seq1  TCCAGCCAGGTCTACAGTCCCAAATCCTACCAAGAAAATTGTGGTGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCCAGGTCTACAGTCCCAAATCCTACCAAGAAAATTGTGGTGAGTT  650

seq1  GCAACTTAAATAAAATTCGGTTGATTAAAATCTCAATAGAGTCCAGGTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTTAAATAAAATTCGGTTGATTAAAATCTCAATAGAGTCCAGGTGT  700

seq1  CCTTTCTGAGTTCTCAAACTCCACGACTCATTGCCTGGAATTC  743
      |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTGAGTTCTCAAACTCCACGACTCATTGCCTGGAATTC  743