MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-109F08
Chromosome	9 (Build37)
Map Location	111,946,857 - 111,947,034
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Ccrl2, LOC100039275, Lrrfip2, Mlh1, Epm2aip1, Lba1, Dclk3, LOC620615, Stac, 4930545L08Rik
Downstream gene	Arpp21, LOC100039341, LOC620760, LOC100043800, EG622110, LOC100039391
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ccrl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:54199 MGI:1920904
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039275 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039275
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Lrrfip2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71268 MGI:1918518
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mlh1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17350 MGI:101938
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Epm2aip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77781 MGI:1925031
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lba1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320429 MGI:1341834
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 62 ESTs, 3 Proteins

name	Dclk3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245038 MGI:3039580
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC620615 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620615
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins pseudo : _no_value

name	Stac (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20840 MGI:1201400
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930545L08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78028 MGI:1925278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Arpp21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74100 MGI:107562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100039341 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039341
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC620760 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:620760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100043800 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG622110 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622110 MGI:3642990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100039391 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Ccrl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142370308 GeneID:54199 MGI:1920904
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-C motif) receptor-like 2 transcript_id : NM_017466.4

name	Lrrfip2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803187 GeneID:71268 MGI:1918518
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat (in FLII) interacting protein 2 transcript_id : NM_027742.2

name	Mlh1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:19387851 GeneID:17350 MGI:101938
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mutL homolog 1 (E. coli) transcript_id : NM_026810.1

name	Epm2aip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802070 GeneID:77781 MGI:1925031
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : EPM2A (laforin) interacting protein 1 transcript_id : NM_175266.3

name	Lba1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260382 GeneID:320429 MGI:1341834
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 62 ESTs, 3 Proteins product : lupus brain antigen 1 transcript_id : XM_001481067.1

name	Dclk3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803340 GeneID:245038 MGI:3039580
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : doublecortin-like kinase 3 transcript_id : NM_172928.2

name	Stac (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131208 GeneID:20840 MGI:1201400
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : src homology three (SH3) and cysteine rich domain transcript_id : NM_016853.2

name	4930545L08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260385 GeneID:78028 MGI:1925278
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 4930545L08 gene transcript_id : XM_001481069.1

name	Arpp21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:15149483 GeneID:74100 MGI:107562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclic AMP-regulated phosphoprotein, 21 transcript_id : NM_033264.1

name	Arpp21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27753996 GeneID:74100 MGI:107562
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclic AMP-regulated phosphoprotein, 21 transcript_id : NM_028755.2

name	LOC100039341 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260331 GeneID:100039341
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100039341 transcript_id : XM_001472717.1

name	LOC620760 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260387 GeneID:620760
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC620760 transcript_id : XM_001481077.1

name	LOC100043800 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260389 GeneID:100043800
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100043800 transcript_id : XM_001481078.1

name	EG622110 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149260333 GeneID:622110 MGI:3642990
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG622110 transcript_id : XM_922665.3

name	LOC100039391 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149260335 GeneID:100039391
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001472809.1

name	Ccrl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980870 CCDS:CCDS23582.1 GeneID:54199 MGI:1920904
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016493 - C-C chemokine receptor activity [Evidence ISS] [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : chemokine (C-C) receptor 1,-like 2; chemokine (C-C) receptor 1-like 2 product : lipopolysaccharide inducible C-C chemokine receptor related protein_id : NP_059494.2

name	Lrrfip2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625827 CCDS:CCDS23583.1 GeneID:71268 MGI:1918518
definition	GO_function : GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 product : leucine rich repeat (in FLII) interacting protein 2 protein_id : NP_082018.1

name	Mlh1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19387852 GeneID:17350 MGI:101938
definition	GO_component : GO:0005694 - chromosome [Evidence IDA]; GO:0000793 - condensed chromosome [Evidence IDA] [Evidence IMP]; GO:0005634 - nucleus [Evidence IEA]; GO:0000795 - synaptonemal complex [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0008630 - DNA damage response, signal transduction resulting in induction of apoptosis [Evidence IMP]; GO:0006281 - DNA repair [Evidence IMP]; GO:0007140 - male meiosis [Evidence IMP]; GO:0007060 - male meiosis chromosome segregation [Evidence IMP]; GO:0007126 - meiosis [Evidence IDA] [Evidence TAS]; GO:0007131 - meiotic recombination [Evidence IMP]; GO:0006298 - mismatch repair [Evidence IDA]; GO:0045950 - negative regulation of mitotic recombination [Evidence IMP]; GO:0006974 - response to DNA damage stimulus [Evidence IMP] codon_start : 1 exception : mismatches in translation note : DNA mismatch repair protein MLH1; colon cancer, nonpolyposis type 2 product : MutL protein homolog 1 protein_id : NP_081086.1

name	Epm2aip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424918 GeneID:77781 MGI:1925031
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence ISS] [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 product : EPM2A (laforin) interacting protein 1 protein_id : NP_780475.1

name	Lba1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260383 GeneID:320429 MGI:1341834
definition	codon_start : 1 product : lupus brain antigen 1 protein_id : XP_001481117.1

name	Dclk3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370432 CCDS:CCDS23585.1 GeneID:245038 MGI:3039580
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 note : doublecortin and CaM kinase-like 3; Click-I, -II related product : doublecortin-like kinase 3 protein_id : NP_766516.1

name	Stac (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8394367 CCDS:CCDS23586.1 GeneID:20840 MGI:1201400
definition	GO_function : GO:0019992 - diacylglycerol binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : src homology three (SH3) and cysteine rich domain protein_id : NP_058549.1

name	4930545L08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260386 GeneID:78028 MGI:1925278
definition	codon_start : 1 product : hypothetical protein LOC78028 protein_id : XP_001481119.1

name	Arpp21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15149484 CCDS:CCDS23587.1 GeneID:74100 MGI:107562
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008599 - protein phosphatase type 1 regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; thymocyte ARPP; protein phosphatase 1, regulatory (inhibitory) subunit 1C product : cyclic AMP-regulated phosphoprotein, 21 isoform 2 protein_id : NP_150289.1

name	Arpp21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311869 GeneID:74100 MGI:107562
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008599 - protein phosphatase type 1 regulator activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; thymocyte ARPP; protein phosphatase 1, regulatory (inhibitory) subunit 1C product : cyclic AMP-regulated phosphoprotein, 21 isoform 1 protein_id : NP_083031.1

name	LOC100039341 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260332 GeneID:100039341
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472767.1

name	LOC620760 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260388 GeneID:620760
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481127.1

name	LOC100043800 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260390 GeneID:100043800
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001481128.1

name	EG622110 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149260334 GeneID:622110 MGI:3642990
definition	codon_start : 1 product : hypothetical protein protein_id : XP_927758.3

name	LOC100039391 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149260336 GeneID:100039391
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472859.1

name	LOC100039275 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039275
definition	number : 2 pseudo : _no_value

name	LOC100039275 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039275
definition	number : 1 pseudo : _no_value

name	LOC620615 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149260384 GeneID:620615
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 7 Proteins product : similar to Ribosomal protein L7a pseudo : _no_value transcript_id : XR_034972.1

clone name	MSMg01-346A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-325C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-490D18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046P02
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-186J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-073D10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-136M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-105J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524G21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142I04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-312E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-111F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-290M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364N02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-464G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262G23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458M05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-064I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266M23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-154D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-054E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-476I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-121E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-128K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378J16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131J22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-065N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040K24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-006E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100O21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221A03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-320I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-137H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202A13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-077M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217N21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-013O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245K08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-109F08.b	B6Ng01-109F08.g
ACC	DH916268	DH916269
length	962	448
definition	DH916268\|Mus musculus domesticus DNA, BAC clone: B6Ng01-109F08, 5' end.	DH916269\|Mus musculus domesticus DNA, BAC clone: B6Ng01-109F08, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcttccagtagagcaagttaagtctaaaatgagatttggaatgtag ctaagagtgaaatgggaggagggggcaagaagctagccagtaacactctc gggaggggggagacagagagatcagaggaaggcctagtcttttgaactag gttactcatggtcttgagtaatctggagttctgatgtgagcttctgtgtt tgtctattccaagctaggggtatgcttagctggttctgtcccatgttggt agtacgagctgtgggttaaaatggtgtcccatggggtttggctgttggac cagttgggaagtaagaagttttgactgcttgttctccaggccattgctgg gcagacatcaggctgtgagaagcttaggactccattccgggtggggaaac acaatctgtggtccccgtggactttggctcaggggtctcagacctacaca gaagatgaggacatcagactcttgggtaccacagatgctgctggatgtca cagaagagctgagaatggagtcagggcatgtgactggctctatcccaggg cttaaggaaaaagggcaggaagttgagctgcagctgggtcccatggggag aaaagagtcctttgcttgcttgggcaggtggcttggcttggtggcgtcca tggctgggaacacaagagagatcacccgtgggagattaggtgtggctctt tagatgaagatctgctccgttgttccccacagtagatagggaaacactag aaaatagaaagaaatctcatgttcatggagtagtataataaatattgtga aaatgtggtagatctatcatcttatttagtagtgttcctgttgttgttat aaaaaaaaccattactaaaattgagatggtgaggaaaggaattatttgtc tacactgcaacatctgtgctgcatattggaaggaagctaggacaggaccc aacaaggcagga	ctcactttgtgatccatcccatatatagacactaaacccagatactgtgg cagaagcaatgaatgcttgctgactctagcctgatatagctgtttcctga gaggctctgccagtgcctgacaaatacagagttggatacttgcagccaac catgggactgagcaaggagtccccaatggagcagttataaaaaggactaa caaagctgaaagggtttggaaccccataggaagaacaacaatattaacca acaagaccacccctaattcccaaagtctaaaccacaaaacaaagtgcaca catggagcaacccattgctgcagctgcatatgtggcagaagagggtcttc ttggccatcaatgggagaagtggtccagtgaatgctcaataccccagtgt gggtgaatacgtaggcagggaggaaagagtgggtgtgtgtgttggggg
quality values	Open. Hide. 61 43 35 37 61 61 61 61 55 38 12 61 61 61 61 61 61 61 55 61 61 61 61 61 31 28 37 35 27 23 26 22 21 21 37 59 59 59 59 61 61 61 59 55 55 59 59 61 61 59 61 61 61 61 59 61 61 59 61 61 61 61 59 61 61 61 61 59 61 61 55 44 44 44 55 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 55 55 55 59 61 59 59 61 61 55 37 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 44 44 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 55 61 61 47 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 47 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 52 50 61 61 61 61 61 53 52 61 61 53 61 61 61 61 61 61 47 61 61 50 61 52 61 43 50 50 61 52 61 61 61 53 61 61 61 50 61 61 61 61 52 53 50 43 61 45 61 61 53 61 61 61 47 50 61 61 61 43 53 61 42 39 43 53 53 47 39 61 47 61 52 53 45 61 61 53 47 52 38 53 41 52 45 57 24 57 45 50 53 45 45 46 47 47 45 30 47 47 53 53 42 41 14 53 52 45 47 31 53 45 57 47 31 53 53 39 57 53 40 23 32 38 38 53 47 26 34 30 50 38 47 33 50 37 43 24 34 47 17 11 12 15 12 12 47 30 38 36 53 42 52 40 53 38 37 45 57 33 52 53 29 39 19 38 52 53 45 53 53 47 42 50 52 24 37 41 37 40 42 53 52 37 45 42 35 23 28 30 9 17 24 30 41 50 43 35 24 27 53 30 39 18 22 43 30 26 24 57 30 39 38 21 31 57 19 19 18 57 57 30 29 50 24 46 57 28 42 31 53 25 28 27 36 29 40 29 42 53 19 32 37 26 37 32 40 29 15 17 16 12 14 10 29 37 38 27 53 9 34 27 19 23 36 31 29 17 15 34 53 53 41 46 44 44 31 24 16 11 14 8 13 21 35 37 53 53 44 39 39 39 33 10 35 28 40 44 24 37 37 40 36 27 57 32 40 32 32 29 14 15 8 7 7 6 21 17 13 17 12 34 13 27 20 36 26 17 38 41 12 9 20 22 5 5 18 23 29 24 22 11 25 27 29 23 25 16 38 20 15 30 25 21 12 18 16 16 29 28 28 14 24 25 17 24 27 30 12 15 24 20 18 15 17 29 8 20 23 48 27	Open. Hide. 20 22 28 12 22 23 36 43 41 35 41 59 59 59 59 43 61 59 59 59 59 59 59 61 59 61 59 59 59 59 59 59 59 59 59 59 59 61 61 59 59 61 59 55 59 59 61 45 59 37 36 44 36 61 55 55 61 59 59 59 61 59 59 61 61 59 59 55 61 59 59 59 61 59 61 61 61 59 59 59 59 59 59 59 59 59 59 41 35 50 59 61 59 59 59 61 59 59 59 59 52 61 59 61 59 61 59 61 61 59 59 59 59 59 61 59 61 61 61 61 59 59 59 59 59 59 59 59 52 59 59 59 59 61 61 61 61 59 61 61 61 61 59 59 52 59 61 59 61 59 61 59 61 61 59 59 59 59 59 59 61 49 59 59 59 59 61 61 59 59 59 59 61 59 59 59 59 59 61 61 52 61 59 49 59 59 59 59 59 59 59 59 59 59 59 61 61 59 59 59 59 59 59 59 59 61 61 59 59 59 59 59 61 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 59 55 59 61 59 61 61 61 59 59 59 49 52 59 59 59 59 59 59 59 59 59 59 59 59 59 59 61 59 61 59 61 61 61 59 59 59 59 59 59 61 61 59 59 59 59 59 59 59 59 59 59 59 59 61 61 61 59 61 59 59 59 59 59 59 59 59 61 59 59 59 52 59 49 59 59 59 59 59 59 59 59 61 59 59 59 61 59 61 59 59 61 61 59 52 61 61 61 61 59 61 61 61 61 61 61 61 55 61 52 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 55 61 61 61 61 55 55 61 61 55 61 61 61 55 55 61 61 61 55 61 55 55 55 55 55 55 55 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 55 55 61 50 61 61 55 61 61 61 61 55 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 16 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_111946857_111947034
seq2: B6Ng01-109F08.b_58_207

seq1  AGTAGAGCTAGTTAAGTCTCTAAAATGAGATTTGGAAACTGTAGCTAAGA  50
      |||||||| |||||||  |||||||||||||||||||  |||||||||||
seq2  AGTAGAGCAAGTTAAG--TCTAAAATGAGATTTGGAA--TGTAGCTAAGA  46

seq1  GTCAAA-AGGAGGAGGGGGGAAGAAGCTGGC------CACTCT-GGGAGG  92
      || |||  ||||||||||| |||||||| ||      |||||| ||||||
seq2  GTGAAATGGGAGGAGGGGGCAAGAAGCTAGCCAGTAACACTCTCGGGAGG  96

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAG  142
       | |||| |||||||                           |||| |||
seq2  GGGGAGACAGAGAGA-------------------------TCAGAGGAAG  121

seq1  GCCTAATCTTTTGAACTAGGTCAGGGCTTACTCATG  178
      ||||| ||||||||||||||       |||||||||
seq2  GCCTAGTCTTTTGAACTAGG-------TTACTCATG  150

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information