BAC Information

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BAC

Clone NameB6Ng01-113B19
Chromosome9 (Build37)
Map Location 17,475,511 - 17,476,585
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434373, LOC100040074, LOC100040090
Downstream geneLOC244710, LOC100040508, EG665548, LOC665554, LOC665567, Chordc1, Naalad2, B020006M18Rik, Map1lc3-ps, Mbd3l2, Zfp558, Mbd3l1, Muc16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113B19.bB6Ng01-113B19.g
ACCDH918990DH918991
length4691,074
definitionDH918990|Mus musculus domesticus DNA, BAC clone: B6Ng01-113B19, 5' end.DH918991|Mus musculus domesticus DNA, BAC clone: B6Ng01-113B19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
ctgatctttccaagactgttgttatgaatgggtgttggattttgtcaaat
gttttctccgcatctaacgagatgatcatgtggattttgtctttgagttt
gtttatataatggattatgttgatggatttccatatattaaaccatccct
gcatcctgggatgaaacctacttggtcaggatggatgattgttttgatgt
gttcttagtttaggttagcgagaattttattgagtatttttgtatcgata
ttcataagggaaattggtctgaagttctctatctttgttggtctttctgt
ggtttaggtatcagagtaatagtggcttcatagaatgaattgggtagagt
accttctccttcaatttcgtggaagtttgtgaagaactggaattagatct
tgtttgaagttctgatagaactctgcactaaacccatatggtcctgggtt
ttttttggggggaggggtt

gaattcccagttgtgtacagatgaaaatgagcagatatctggcaatacct
gggactcactgatcagccagatggtttgaaccacttatgtttagagacag
gccctatgtcaaaaattattgtagggaagaaattgaggaagacacctgac
ttcagtctctggcctttccgttccaacacatacaacattaacaaacctta
tgaataccacacataaacatgcagacatgaataaatatatagacacattc
aaacacacaaatctgtattacactcactctgatacacatagccaaaacct
aagaattcataaaattctacttcttcataacatatatctcatggtattat
gtttttattgcatttgatttcagctattcatgacaacacaaagtcagaaa
aagattatgtaaagcactgtgttcaaacatatacatactttaattttaag
ctcataaatgagaacttgtagtttatacacaacattttgcagatatggag
atattactaaaacctcacaaaataagaaaattgaattgtaatatgtataa
tgcaataattccctaaaacatgtaataattttatataatcaatgcttgtt
tattaaaaaatatttattgccatttttatataagctgcacaattttgtta
atgtatataatttttaaacatgaactaccctctcatctttcaggtgctct
cccatctttcagatgtatgtaactgtatcctcccctctttcagatttctg
tattgtttctttgttctttgtacttactgttttaactgtggaatatgtgg
agagagttttctgtggtcattttttgagattcaaaaagatgaccattgct
ttcctaactttttggggtcttctgtgtgatttattttgaatgttttcaaa
ggttttgccttgtgtatctcctctttctatgtcatgatgtaaagttgttt
ttttcatttaattgtacacagttctggaagttgggcaaatgtccattaat
atttcttttctccttactaatcatcaaagatctaatttcattcacttttg
tctttaattggggataatacttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_17475511_17476585
seq2: B6Ng01-113B19.g_67_1140 (reverse)

seq1  TGAAGAATTATCACCAATTAAAGAC-AAAGTGGATGAATTAGGATATTTA  49
      ||||| |||||| |||||||||||| |||||| ||||| |  ||| ||| 
seq2  TGAAGTATTATCCCCAATTAAAGACAAAAGTGAATGAAATTAGATCTTT-  49

seq1  GATGATAAGTAAGGAGAAAAGAAAATATTAATGGGACATTTGCACAACTC  99
      |||||| |||||||||||||| |||||||||| |||||||||| ||||| 
seq2  GATGATTAGTAAGGAGAAAAG-AAATATTAAT-GGACATTTGCCCAACTT  97

seq1  TCAGAACTTGTGTAC-ATTAAATGAAAAAAACAAACTTTACATCATGACA  148
       |||||| ||||||| |||||||||||||||| |||||||||||||||||
seq2  CCAGAAC-TGTGTACAATTAAATGAAAAAAAC-AACTTTACATCATGACA  145

seq1  TAG-AAGAGGAGATACACAAGGCAAAACCTTTGAAAACATTCAAAAATAA  197
      ||| |||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAGAAAGAGGAGATACACAAGGCAAAACCTTTGAAAACATTC-AAAATAA  194

seq1  ATCACACAGAAGACCCC-AAAAGTTAGGAAAGCAATGGTCATCTTTTTGA  246
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATCACACAGAAGACCCCAAAAAGTTAGGAAAGCAATGGTCATCTTTTTGA  244

seq1  ATCTC-AAAAATGACCACAGAAAACTCTCTCCACATATTCCACAGTTAAA  295
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAAAAAATGACCACAGAAAACTCTCTCCACATATTCCACAGTTAAA  294

seq1  ACAGTAAGTACAAAGAACAAAGAAACAATACAGAAATCTGAAAGAGGGGA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAAGTACAAAGAACAAAGAAACAATACAGAAATCTGAAAGAGGGGA  344

seq1  GGATACAGTTACATACATCTGAAAGATGGGAGAGCACCTGAAAGATGAGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACAGTTACATACATCTGAAAGATGGGAGAGCACCTGAAAGATGAGA  394

seq1  GGGTAGTTCATGTTTAAAAATTATATACATTAACAAAATTGTGCAGCTTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGTTCATGTTTAAAAATTATATACATTAACAAAATTGTGCAGCTTA  444

seq1  TATAAAAATGGCAATAAATATTTTTTAATAAACAAGCATTGATTATATAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAATGGCAATAAATATTTTTTAATAAACAAGCATTGATTATATAA  494

seq1  AATTATTACATGTTTTAGGGAATTATTGCATTATACATATTACAATTCAA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATTACATGTTTTAGGGAATTATTGCATTATACATATTACAATTCAA  544

seq1  TTTTCTTATTTTGTGAGGTTTTAGTAATATCTCCATATCTGCAAAATGTT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTATTTTGTGAGGTTTTAGTAATATCTCCATATCTGCAAAATGTT  594

seq1  GTGTATAAACTACAAGTTCTCATTTATGAGCTTAAAATTAAAGTATGTAT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATAAACTACAAGTTCTCATTTATGAGCTTAAAATTAAAGTATGTAT  644

seq1  ATGTTTGAACACAGTGCTTTACATAATCTTTTTCTGACTTTGTGTTGTCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGAACACAGTGCTTTACATAATCTTTTTCTGACTTTGTGTTGTCA  694

seq1  TGAATAGCTGAAATCAAATGCAATAAAAACATAATACCATGAGATATATG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGCTGAAATCAAATGCAATAAAAACATAATACCATGAGATATATG  744

seq1  TTATGAAGAAGTAGAATTTTATGAATTCTTAGGTTTTGGCTATGTGTATC  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAGAAGTAGAATTTTATGAATTCTTAGGTTTTGGCTATGTGTATC  794

seq1  AGAGTGAGTGTAATACAGATTTGTGTGTTTGAATGTGTCTATATATTTAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGTGTAATACAGATTTGTGTGTTTGAATGTGTCTATATATTTAT  844

seq1  TCATGTCTGCATGTTTATGTGTGGTATTCATAAGGTTTGTTAATGTTGTA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCTGCATGTTTATGTGTGGTATTCATAAGGTTTGTTAATGTTGTA  894

seq1  TGTGTTGGAACGGAAAGGCCAGAGACTGAAGTCAGGTGTCTTCCTCAATT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTGGAACGGAAAGGCCAGAGACTGAAGTCAGGTGTCTTCCTCAATT  944

seq1  TCTTCCCTACAATAATTTTTGACATAGGGCCTGTCTCTAAACATAAGTGG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCTACAATAATTTTTGACATAGGGCCTGTCTCTAAACATAAGTGG  994

seq1  TTCAAACCATCTGGCTGATCAGTGAGTCCCAGGTATTGCCAGATATCTGC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACCATCTGGCTGATCAGTGAGTCCCAGGTATTGCCAGATATCTGC  1044

seq1  TCATTTTCATCTGTACACAACTGGGAATTC  1075
      ||||||||||||||||||||||||||||||
seq2  TCATTTTCATCTGTACACAACTGGGAATTC  1074


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