BAC Information

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BAC

Clone NameB6Ng01-113E10
Chromosome9 (Build37)
Map Location 119,739,046 - 119,891,918
singlet/doubletdoublet
Overlap geneLOC100039837, Wdr48, Gorasp1, Ttc21a, Axud1
Upstream geneItga9, LOC100039768, Ctdspl, Vill, Plcd1, Dlec1, Acaa1b, EG546165, Slc22a14, Slc22a13, 9330176C04Rik, Oxsr1, Myd88, Acaa1a, Xylb, Acvr2b, Endogl1, Scn5a, Scn10a, Scn11a
Downstream geneCmya1, Cx3cr1, Ccr8, Slc25a38, Rpsa, Snora62, EG546166, Mobp, LOC100039898, Myrip, LOC666044, Eif1b, LOC638068, Entpd3, Rpl14, 5830454E08Rik, LOC100040010, Ctnnb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-113E10.bB6Ng01-113E10.g
ACCDH919112DH919113
length779382
definitionDH919112|Mus musculus domesticus DNA, BAC clone: B6Ng01-113E10, 5' end.DH919113|Mus musculus domesticus DNA, BAC clone: B6Ng01-113E10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,891,140 - 119,891,918)(119,739,046 - 119,739,433)
sequence
gaattcctccctcctctctagctacccacccaacatctctggaccgaagt
ctcagccttctgcagagagtaagtcaatactctctgcccccaaatctttg
acagccccgcccacatctcccgagctgtcaccaaatccacccccttttct
cctttgcgcttgtcctgtcagttcacctggccctaccctgtgtcctacgg
gtcacaccctctctggctcaggcgctgagccatctttcaaccatgcaaat
ctagaattgtcagtccttacttacgcacttgggtggcttcctgtgccctc
gggctaacacaggccctcttagttgcatcgccaccagaaggcgcactggc
tgtccttgctccagtccctgtaccatgcagtgtgaccccccccccccaat
ctggaactctgccaacatccctccttcagaggagcctgcctcgtccccag
ttctacccttcttgcctatcctgtataactcctacttgagaggtgttagt
tgtaggtgctttacctgtgtgcccaatgcctgtcatagtgtttggccttt
aggaagcttagccaggattagattgatgaatgaatgaatgaatgtgaaaa
actggcttaaggtggaggaaggggtgactgtcaagtgcagttttccctgg
gtagaactgagtattttatacagccagcaaacatttggcatttacccagg
gcagggctctggagtctgaatcgaaggaactgtcccctccccccatcact
ttctgaggcatgggtgggggaggggtacg
aaagcccagaatccacatttaaaaatccaggtgcaagcactgcccgcctg
taaggtcagtgctgggaaggacagagacagaaggatccctgaagttggct
ggccagccagtcaagccaaatgcatgcactctgggttcagtgggagactc
tgtctcagtggggctagagagctggttcagcggttaagagcacttgcaga
ggacctgagtgtggctgccaccgccctccacaggctcacagtgtgcacag
gaaaaaaaggatgtatgatccacatccccaccctccacagaggcaaatgt
tctatatgccttccacacttttggtgtgcatgtgtatatgggcatgtgtg
tttgcatgtgtgagggtatgtgtggtgggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_119891140_119891918
seq2: B6Ng01-113E10.b_47_825 (reverse)

seq1  CGTACCCCTCCCCCACCCATGCCTCAGAAAGTGATGGGGGGAGGGGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACCCCTCCCCCACCCATGCCTCAGAAAGTGATGGGGGGAGGGGACAG  50

seq1  TTCCTTCGATTCAGACTCCAGGGCCCTGCCCTGGGTAAATGCCAAATGTT  100
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTCCTTCGATTCAGACTCCAGAGCCCTGCCCTGGGTAAATGCCAAATGTT  100

seq1  TGCTGGCTGTATAAAATACTCAGTTCTACCCAGGGAAAACTGCACTTGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGCTGTATAAAATACTCAGTTCTACCCAGGGAAAACTGCACTTGAC  150

seq1  AGTCACCCCTTCCTCCACCTTAAGCCAGTTTTTCACATTCATTCATTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCCCTTCCTCCACCTTAAGCCAGTTTTTCACATTCATTCATTCAT  200

seq1  TCATCAATCTAATCCTGGCTAAGCTTCCTAAAGGCCAAACACTATGACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAATCTAATCCTGGCTAAGCTTCCTAAAGGCCAAACACTATGACAG  250

seq1  GCATTGGGCACACAGGTAAAGCACCTACAACTAACACCTCTCAAGTAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGGCACACAGGTAAAGCACCTACAACTAACACCTCTCAAGTAGGA  300

seq1  GTTATACAGGATAGGCAAGAAGGGTAGAACTGGGGACGAGGCAGGCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATACAGGATAGGCAAGAAGGGTAGAACTGGGGACGAGGCAGGCTCCT  350

seq1  CTGAAGGAGGGATGTTGGCAGAGTTCCAGATTGGGGGGGGGGGGTCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGAGGGATGTTGGCAGAGTTCCAGATTGGGGGGGGGGGGTCACAC  400

seq1  TGCATGGTACAGGGACTGGAGCAAGGACAGCCAGTGCGCCTTCTGGTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGTACAGGGACTGGAGCAAGGACAGCCAGTGCGCCTTCTGGTGGC  450

seq1  GATGCAACTAAGAGGGCCTGTGTTAGCCCGAGGGCACAGGAAGCCACCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAACTAAGAGGGCCTGTGTTAGCCCGAGGGCACAGGAAGCCACCCA  500

seq1  AGTGCGTAAGTAAGGACTGACAATTCTAGATTTGCATGGTTGAAAGATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCGTAAGTAAGGACTGACAATTCTAGATTTGCATGGTTGAAAGATGG  550

seq1  CTCAGCGCCTGAGCCAGAGAGGGTGTGACCCGTAGGACACAGGGTAGGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCGCCTGAGCCAGAGAGGGTGTGACCCGTAGGACACAGGGTAGGGC  600

seq1  CAGGTGAACTGACAGGACAAGCGCAAAGGAGAAAAGGGGGTGGATTTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGAACTGACAGGACAAGCGCAAAGGAGAAAAGGGGGTGGATTTGGT  650

seq1  GACAGCTCGGGAGATGTGGGCGGGGCTGTCAAAGATTTGGGGGCAGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTCGGGAGATGTGGGCGGGGCTGTCAAAGATTTGGGGGCAGAGAG  700

seq1  TATTGACTTACTCTCTGCAGAAGGCTGAGACTTCGGTCCAGAGATGTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGACTTACTCTCTGCAGAAGGCTGAGACTTCGGTCCAGAGATGTTGG  750

seq1  GTGGGTAGCTAGAGAGGAGGGAGGAATTC  779
      |||||||||||||||||||||||||||||
seq2  GTGGGTAGCTAGAGAGGAGGGAGGAATTC  779

seq1: chr9_119739046_119739433
seq2: B6Ng01-113E10.g_70_457

seq1  GAATTCAAAGCCCAGAATCCACATTTAAAAATCCAGGTGCAAGCACTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCCCAGAATCCACATTTAAAAATCCAGGTGCAAGCACTGCC  50

seq1  CGCCTGTAAGGTCAGTGCTGGGAAGGACAGAGACAGAAGGATCCCTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTGTAAGGTCAGTGCTGGGAAGGACAGAGACAGAAGGATCCCTGAAG  100

seq1  TTGGCTGGCCAGCCAGTCAAGCCAAATGCATGCACTCTGGGTTCAGTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGGCCAGCCAGTCAAGCCAAATGCATGCACTCTGGGTTCAGTGGG  150

seq1  AGACTCTGTCTCAGTGGGGCTAGAGAGCTGGTTCAGCGGTTAAGAGCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTGTCTCAGTGGGGCTAGAGAGCTGGTTCAGCGGTTAAGAGCACT  200

seq1  TGCAGAGGACCTGAGTGTGGCTGCCACCGCCCTCCACAGGCTCACAGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGACCTGAGTGTGGCTGCCACCGCCCTCCACAGGCTCACAGTGT  250

seq1  GCACAGGAAAAAAAGGATGTATGATCCACATCCCCACCCTCCACAGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGGAAAAAAAGGATGTATGATCCACATCCCCACCCTCCACAGAGGC  300

seq1  AAATGTTCTATATGCCTTCCACACTTTTGGTGTGCATGTGTATATGGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTCTATATGCCTTCCACACTTTTGGTGTGCATGTGTATATGGGCA  350

seq1  TGTGTGTTTGCATGTGTGAGGGTATGTGTGGTGGGAGG  388
      ||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTTGCATGTGTGAGGGTATGTGTGGTGGGAGG  388