MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-115I16
Chromosome	9 (Build37)
Map Location	11,143,411 - 11,144,469
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cntn5, LOC665154, LOC100039970, LOC665178
Downstream gene	LOC100039989
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cntn5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:244682 MGI:3042287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins

name	LOC665154 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins pseudo : _no_value

name	LOC100039970 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs

name	LOC665178 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665178
definition	note : CD2-associated protein pseudogene pseudo : _no_value

name	LOC100039989 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs

name	Cntn5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259445 GeneID:244682 MGI:3042287
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins product : contactin 5 transcript_id : XM_974864.2

name	LOC100039970 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259457 GeneID:100039970
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 13 ESTs product : hypothetical protein LOC100039970 transcript_id : XM_001473774.1

name	LOC100039989 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259459 GeneID:100039989
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 25 ESTs product : similar to gag polyprotein transcript_id : XM_001473790.1

name	Cntn5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259446 GeneID:244682 MGI:3042287
definition	codon_start : 1 product : contactin 5 protein_id : XP_979958.2

name	LOC100039970 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259458 GeneID:100039970
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001473824.1

name	LOC100039989 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259460 GeneID:100039989
definition	codon_start : 1 product : similar to gag polyprotein protein_id : XP_001473840.1

name	LOC665178 (CDS detail)
type	misc_feature
link	vega ensembl
xref
definition	note : clone_boundary; clone_end:T7; site:EcoRI pseudo : _no_value

name	(CDS detail)
type	misc_feature
link
xref
definition	note : wgs_end_extension; clone_end:T7

name	LOC665154 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259447 GeneID:665154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 5 Proteins product : similar to MGC27348 protein pseudo : _no_value transcript_id : XR_031035.1

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual single clone coverage

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual SNGL region

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual SNGL region

name	LOC665178 (CDS detail)
type	unsure
link	vega ensembl
xref
definition	note : <30 qual SNGL region

clone name	MSMg01-460G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-237P24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-134J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509O24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-432B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-197A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-260K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336L01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-085A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-048L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-276B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046I08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064A17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-459F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-184G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-300B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-534G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-210D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-190A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401C03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-545J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060D11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409G03
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-145L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-302O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-216E01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-215L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-274B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-119L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-115O15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187O22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027H21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115I16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035K07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176M16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-253P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-110F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250K19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145F06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-039F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077E07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344E04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165L22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-313E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-187P09
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-115I16.b	B6Ng01-115I16.g
ACC	DH920777	DH920778
length	1,149	1,050
definition	DH920777\|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I16, 5' end.	DH920778\|Mus musculus domesticus DNA, BAC clone: B6Ng01-115I16, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcagccctgaatttgattatttcctgctgtctactcttcttgcatg aatttgcttccctttgttctacagcttttaggagtactgtcaagctgtta gtgtatgctctatccagtttctttttagaagcattcagagctatgagttt tccttttaggcatgttttcattgtgtcctataagtttgggtatgttgtgg cttcattttcattaaacttagtctttaatttctgtatttcttccttgacc aagttatcactgagtacattgttgttcattttccatgtgtatgtgtactt tctactatttatgttgttattgaagatcagccttagtctgtggtgatctg ataggatacatgggataatttcaatatttttgtatctgttgaggcctgtt ttgcgacctatggtatggtcagttttggagaaggtaccatgaggtgctga gaagaaggtatatccttttgttttagattaaaatgttctatagatatatg ttaaattcatttgtttcataacttttgttagttttactgtgtctttgttt aattctgtttccaggatctgtccattcctgagagtggggtgataaagtct tccactcttattctgtgtggtgcaatgtgtgctttgagctatttgtgtta atgaatatggatgcccttgcatttggagcatagatgttcagaattcagag ttcatcttggtaaattatacctttgatgaatatgaagtgtccctccttat ctttttttgataactttagtttgaaagtcgattttattcaatattagaat ggctactcgagcttgtttcttgggactatttacatggaaatttgttttac agccttttattctgaggtactgtctgtctttgtcaccaaagtgggtttcc tctatacagcaaactgttgggtcctgtttcagtaacgagtttgttagtct atgtctttttattggggaatttgatcaattgatattaagagatataagga aagtcactgttgctttctgttatttttgttgtagatttgggacctctatt catgtgcctatattctttttaggaatgttgaagattacttctgcttttct aggggggctaacttggggttgcagttttcctttattatatccttgaaag	gaattcttctccacttatccctattagttttacatttggtcttttaatag attcccagattatgttaggagttttttggatttaatatttttctctagtt taaatttttaaactttaaggtaagttttaaacttccatgttctgcaattt tttattacaccttaatagcctttgctaaaatatttaggacatatattgtt ccattgcttcttacacaagaaactcaattcccctttacataattagacta cattgtcattaccaatactaagttcaggaaggaaggttaacctaaatttt gctttggatttgataacattttccttgatcagtgtatttgcttcttcaat tatatcttcaattcctcagatttttttctttcacattctatattctattt gtgatgtatctgtagtttcttctggcttacctagatttttcacctccagg attctctcagtttttgttttattaattctttctacttccattttcatgtt ttaaacaattttattcaattccttcacctgtttgtttacattttttgtga atttctttacggtatttattaattttctctttaaatttctttataatctt cataagattggatttaaagtcattttttgtgcttcatttgtattggaata ttcaggacttgctgtattagaactggattctggcagttccgtatttccct ggaaatttttgattctgttcttcagctcacctctaggcatctgggcttta gttattataaatttacatgctgatttctatatctttgtttctttttgttt tgtttgtttgtttttgttttttgtttttatttgtttttgttttgtttttg tttttgttttttgagacagggttttctctgtatagccttggctgtcttgg actcacttttgtagaccaggctggcctcaactcagaaatctgtctgctct gcctccgagtgctgggatcaatgcatgtgcaccatgcccggctgaatcta tgtttcttatatggattttgtgttgatttttcccatcggtttttgttttt
quality values	Open. Hide. 61 47 32 32 61 38 22 36 61 61 61 61 61 49 52 55 61 47 49 61 49 61 61 59 61 61 19 28 12 19 18 28 22 21 26 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 55 61 61 61 61 59 61 59 59 59 59 30 37 55 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 59 61 59 61 61 61 61 59 59 61 61 61 59 61 61 61 61 61 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 55 44 44 59 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 47 61 61 61 61 61 61 61 61 43 61 61 61 61 61 61 52 61 61 61 61 61 61 61 50 61 61 47 61 61 61 43 47 61 42 40 61 61 61 61 52 61 61 61 61 61 52 61 61 61 61 53 61 61 61 61 61 61 52 61 61 57 53 50 57 45 57 53 53 53 43 57 53 57 57 57 57 57 53 57 52 57 53 50 53 47 53 57 53 57 43 36 45 57 47 52 57 47 40 48 43 57 57 52 52 53 47 42 53 52 57 57 53 47 53 57 57 50 47 53 38 53 53 52 53 53 52 52 53 41 52 50 53 22 57 53 38 57 53 36 38 57 38 47 52 53 45 45 57 57 50 52 53 32 41 57 53 50 53 43 50 39 57 57 45 43 41 42 52 27 50 53 50 42 32 35 37 53 57 36 50 52 38 52 47 38 50 52 53 40 53 47 40 42 36 57 57 57 57 57 52 38 38 20 28 53 52 53 57 32 34 42 52 57 33 37 40 57 53 28 36 37 40 40 32 57 57 53 42 53 31 36 23 52 40 37 42 29 40 29 48 53 37 41 47 34 48 33 37 40 36 22 41 31 41 40 53 47 27 57 33 33 53 27 40 57 36 26 20 30 30 29 46 30 32 32 24 33 51 30 35 51 34 27 46 32 29 16 51 51 29 25 35 28 25 16 20 8 17 28 22 29 14 41 25 24 28 30 19 23 21 25 28 21 47 24 29 29 43 24 29 22 47 29 29 23 29 28 33 29 21 39 33 26 24 43 36 26 6 51 46 23 17 18 29 34 25 21 28 38 30 34 36 35 51 29 28 23 43 12 31 29 51 35 22 26 27 23 36 15 31 27 27 29 31 10 7 31 29 14 29 22 23 51 24 18 14 21 28 11 12 33 31 31 26 28 23 33 28 51 51 51 29 23 21 19 24 30 41 29 23 31 13 51 28 21 14 13 28 20 23 22 22 30 31 11 6 6 20 33 10 4 6 13 30 18 13 24 5 14 7 8 38 39 51 16 28 35 23 28 15 34 16 14 22 28 9 35 6 28 7 16 8 7 12 27 44 42 44 14 30 10 31 25 33 28 9 26 9 29 23 10 30 14 26 10 6 6 8 5 12 23 25 14 14 6 9 7 29 7 10 29 5 3 4 10 21 6 5 20 34 29 21 13 17 21 3 4 6 12 12 21 21 29 29 7 14 10 19 15 19 5 17 4 16 19 15 22 30 30 16 5 6 19 13 29 7 4 5 1 3 3 3 2 6 20 9 7 9 11 6 7 8 22 7 4 5 23 31 13 6 5 24 5 21 9 5 7 4 4 7 4 9 14 20 5 18 5 10 20 6 4	Open. Hide. 61 61 55 49 52 36 28 36 28 26 25 14 18 24 29 41 59 61 61 61 61 61 61 61 61 59 59 55 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 38 59 55 37 44 36 35 36 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 55 44 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 47 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 47 55 61 61 61 61 61 61 61 61 55 55 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 61 53 61 61 61 61 61 61 61 61 61 61 50 61 53 61 53 52 47 47 61 61 53 61 61 61 61 61 61 61 61 53 53 61 61 61 61 37 61 61 61 61 61 50 53 61 61 61 61 61 43 43 47 42 61 53 61 42 61 61 61 39 30 61 61 61 61 61 61 61 61 45 61 61 61 61 61 61 61 53 61 52 47 40 50 52 57 57 57 57 47 50 39 57 57 52 57 57 53 52 45 57 45 50 45 57 57 33 53 45 53 53 53 53 38 43 39 52 53 25 57 57 45 53 53 53 47 30 36 40 45 57 53 38 53 50 52 53 30 53 52 33 36 45 53 50 45 43 43 50 52 53 41 26 33 30 57 57 53 57 53 41 21 46 45 32 52 34 52 38 32 41 40 40 27 53 53 38 33 50 41 52 50 45 50 30 57 37 42 42 42 33 47 57 57 50 53 57 30 52 39 52 27 40 22 23 47 38 40 57 52 52 52 37 42 40 30 44 53 40 42 36 52 30 57 47 57 28 57 27 53 40 57 36 57 52 57 33 57 30 48 32 57 57 57 31 29 6 26 41 5 46 23 38 25 25 6 46 37 57 30 53 44 37 28 26 9 37 45 40 40 26 33 9 30 42 39 29 37 34 53 22 24 9 39 53 53 37 46 21 47 32 25 26 6 45 39 45 25 33 31 47 46 36 44 44 16 31 39 30 32 17 9 29 15 31 15 8 7 45 10 5 45 51 7 7 17 25 31 29 12 25 12 23 29 47 12 5 19 26 11 10 25 29 26 41 9 13 19 5 25 21 29 31 29 18 15 51 51 13 30 7 15 8 28 20 18 29 32 27 21 28 27 30 20 19 25 27 46 26 15 29 22 28 6 29 51 41 28 25 19 22 25 34 29 22 41 20 21 29 30 20 11 17 32 29 15 28 9 13 29 17 8 17 29 14 11 21 12 33 36 17 33 17 17 12 19 6 9 36 16 8 38 17 28 17 10 27 17 25 23 15 19 33 7 10 16 6 5 30 27 31 16 28 15 22 30 9 14 5 7 5 5 6 7 6 30 34 14 16 29 6 7 17 11 30 18 15 33 30 9 30 35 28 10 5 7 6 4 13 29 39 20 9 28 15 19 16 6 13

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_11143411_11144469
seq2: B6Ng01-115I16.g_68_1117

seq1  GAATTCTTCTCCACTTATCCCTATTAGTTTTACATTTGGTCTTTTAATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCCACTTATCCCTATTAGTTTTACATTTGGTCTTTTAATAG  50

seq1  ATTCCCAGATTATGTTAGGAGTTTTTTGGATTTAATATTTTTCTCTAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCAGATTATGTTAGGAGTTTTTTGGATTTAATATTTTTCTCTAGTT  100

seq1  TAAATTTTTAAACTTTAAGGTAAGTTTTAAACTTCCATGTTCTGCAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTAAACTTTAAGGTAAGTTTTAAACTTCCATGTTCTGCAATTT  150

seq1  TTTATTACACCTTAATAGCCTTTGCTAAAATATTTAGGACATATATTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTACACCTTAATAGCCTTTGCTAAAATATTTAGGACATATATTGTT  200

seq1  CCATTGCTTCTTACACAAGAAACTCAATTCCCCTTTACATAATTAGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGCTTCTTACACAAGAAACTCAATTCCCCTTTACATAATTAGACTA  250

seq1  CATTGTCATTACCAATACTAAGTTCAGGAAGGAAGGTTAACCTAAATTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTCATTACCAATACTAAGTTCAGGAAGGAAGGTTAACCTAAATTTT  300

seq1  GCTTTGGATTTGATAACATTTTCCTTGATCAGTGTATTTGCTTCTTCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGGATTTGATAACATTTTCCTTGATCAGTGTATTTGCTTCTTCAAT  350

seq1  TATATCTTCAATTCCTCAGATTTTTTTCTTTCACATTCTATATTCTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCTTCAATTCCTCAGATTTTTTTCTTTCACATTCTATATTCTATTT  400

seq1  GTGATGTATCTGTAGTTTCTTCTGGCTTACCTAGATTTTTCACCTCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGTATCTGTAGTTTCTTCTGGCTTACCTAGATTTTTCACCTCCAGG  450

seq1  ATTCTCTCAGTTTTTGTTTTATTAATTCTTTCTACTTCCATTTTCATGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTCAGTTTTTGTTTTATTAATTCTTTCTACTTCCATTTTCATGTT  500

seq1  TTAAACAATTTTATTCAATTCCTTCACCTGTTTGTTTACATTTTTTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACAATTTTATTCAATTCCTTCACCTGTTTGTTTACATTTTTTGTGA  550

seq1  ATTTCTTTACGGTATTTATTAATTTTCTCTTTAAATTTCTTTATAATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTACGGTATTTATTAATTTTCTCTTTAAATTTCTTTATAATCTT  600

seq1  CATAAGATTGGATTTAAAGTCATTTTTTGTGCTTCATTTGTATTGGAATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATTGGATTTAAAGTCATTTTTTGTGCTTCATTTGTATTGGAATA  650

seq1  TTCAGGACTTGCTGTATTAGAACTGGATTCTGGCAGTTCCGTATTTCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGACTTGCTGTATTAGAACTGGATTCTGGCAGTTCCGTATTTCCCT  700

seq1  GGAAATTTTTGATTCTGTTCTTCAGCTCACCTCTAGGCATCTGGGCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTTTGATTCTGTTCTTCAGCTCACCTCTAGGCATCTGGGCTTTA  750

seq1  GTTATTATAAATTTACATGCTGATTTCTATATCTTTGTTTCTTTTTG-TT  799
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTTATTATAAATTTACATGCTGATTTCTATATCTTTGTTTCTTTTTGTTT  800

seq1  TGTTTGTTTGTTTTTGTTTTTTGTTTTTATTTGTTTTTTGTTTTGTTTTT  849
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  TGTTTGTTTGTTTTTGTTTTTTGTTTTTATTTG-TTTTTGTTTTG-TTTT  848

seq1  TGTTTTTTGTTTTTTTGAGACAGGG-TTTCTCTGTATAGCCCTGGCTGTC  898
      |||||||   ||||||||||||||| ||||||||||||||| ||||||||
seq2  TGTTTTT--GTTTTTTGAGACAGGGTTTTCTCTGTATAGCCTTGGCTGTC  896

seq1  CTGGAACTCAC-TTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGTC  947
       ||| |||||| ||||||||||||||||||||| ||||||||||||||||
seq2  TTGG-ACTCACTTTTGTAGACCAGGCTGGCCTC-AACTCAGAAATCTGTC  944

seq1  TGCCTCTGCCTCCCGAGTGCTGGGATCAAATGCATGTGCCACCATGCCCG  997
      || |||||||| ||||||||||||||| |||||||||| |||||||||||
seq2  TG-CTCTGCCT-CCGAGTGCTGGGATC-AATGCATGTG-CACCATGCCCG  990

seq1  GCTGGATCTATGTTTCTTATATGGATTTTGTTGTTGATTTTTCCCCATCG  1047
      |||| ||||||||||||||||||||||||| ||||||||||| |||||||
seq2  GCTGAATCTATGTTTCTTATATGGATTTTG-TGTTGATTTTT-CCCATCG  1038

seq1  GTTTTTGTTTTT  1059
      ||||||||||||
seq2  GTTTTTGTTTTT  1050

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information