MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-117F22
Chromosome	9 (Build37)
Map Location	36,138,466 - 36,139,605
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Cdon, Ddx25, Pus3, EG627480, LOC100042442, Svs7, Gm846, D730048I06Rik, 9230110F15Rik, LOC100041605, 9230113P08Rik, EG546123, LOC100041618, LOC100042485
Downstream gene	EG639025, LOC671003, EG434396, A630095E13Rik, Acrv1, Chek1, Stt3a, Ei24, LOC627681, Fez1, Pknox2, LOC100042545, 1810021J13Rik, Slc37a2, LOC100042561, Ccdc15
Link	Open Mouse BAC browser

Click to get alignment info.

name	Cdon (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57810 MGI:1926387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddx25 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30959 MGI:1353582
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pus3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67049 MGI:1914299
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG627480 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:627480 MGI:3643568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	LOC100042442 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042442
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	Svs7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56872 MGI:1930790
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm846 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330921 MGI:2685692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D730048I06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68171 MGI:1915421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9230110F15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77080 MGI:1924330
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC100041605 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	9230113P08Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77908 MGI:1925158
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs

name	EG546123 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546123 MGI:3643162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs

name	LOC100041618 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041618
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC100042485 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042485
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG639025 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639025 MGI:3647831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein

name	LOC671003 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:671003
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	EG434396 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434396 MGI:3647347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630095E13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235973 MGI:3055869
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Acrv1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11451 MGI:104590
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Chek1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12649 MGI:1202065
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Stt3a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16430 MGI:105124
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ei24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13663 MGI:108090
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC627681 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 ESTs, 6 Proteins pseudo : _no_value

name	Fez1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:235180 MGI:2670976
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pknox2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208076 MGI:2445415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100042545 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	1810021J13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66279 MGI:1913529
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc37a2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56857 MGI:1929693
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042561 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 244 ESTs, 3 Proteins

name	Ccdc15 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:245902 MGI:2444488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cdon (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946653 GeneID:57810 MGI:1926387
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cell adhesion molecule-related/down-regulated by oncogenes transcript_id : NM_021339.1

name	Ddx25 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801077 GeneID:30959 MGI:1353582
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 transcript_id : NM_013932.3

name	Pus3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385846 GeneID:67049 MGI:1914299
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : pseudouridine synthase 3 transcript_id : NM_023292.3

name	EG627480 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82929843 GeneID:627480 MGI:3643568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG627480 transcript_id : XM_892150.1

name	LOC100042442 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259899 GeneID:100042442
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : similar to high mobility group nucleosomal binding domain 2 transcript_id : XM_001478345.1

name	Svs7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922641 GeneID:56872 MGI:1930790
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : seminal vesicle secretory protein 7 transcript_id : NM_020264.2

name	Gm846 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142352358 GeneID:330921 MGI:2685692
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 846, (NCBI) transcript_id : NM_001033421.2

name	D730048I06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124301194 GeneID:68171 MGI:1915421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D730048I06 gene transcript_id : NM_026593.3

name	9230110F15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386056 GeneID:77080 MGI:1924330
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : RIKEN cDNA 9230110F15 gene transcript_id : XM_134713.4

name	LOC100041605 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259867 GeneID:100041605
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041605 transcript_id : XM_001476672.1

name	9230113P08Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259903 GeneID:77908 MGI:1925158
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 4 ESTs product : RIKEN cDNA 9230113P08 gene transcript_id : XM_001478373.1

name	EG546123 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386057 GeneID:546123 MGI:3643162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs product : predicted gene, EG546123 transcript_id : XM_620739.3

name	LOC100041618 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259869 GeneID:100041618
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100041618 transcript_id : XM_001476695.1

name	LOC100042485 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259907 GeneID:100042485
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : similar to sc328 transcript_id : XM_001478386.1

name	EG639025 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94386058 GeneID:639025 MGI:3647831
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 1 Protein product : predicted gene, EG639025 transcript_id : XM_986261.1

name	LOC671003 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259871 GeneID:671003
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to secreted seminal vesicle Ly-6 protein 1 transcript_id : XM_001476733.1

name	EG434396 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142381555 GeneID:434396 MGI:3647347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG434396 transcript_id : NM_001033783.2

name	A630095E13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:128485647 GeneID:235973 MGI:3055869
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630095E13 gene transcript_id : NM_001033325.2

name	Acrv1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326405 GeneID:11451 MGI:104590
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : acrosomal vesicle protein 1 transcript_id : NM_007391.2

name	Chek1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801678 GeneID:12649 MGI:1202065
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : checkpoint kinase 1 homolog (S. pombe) transcript_id : NM_007691.3

name	Stt3a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367166 GeneID:16430 MGI:105124
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae) transcript_id : NM_008408.3

name	Ei24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386127 GeneID:13663 MGI:108090
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : etoposide induced 2.4 mRNA transcript_id : NM_007915.2

name	Fez1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349734 GeneID:235180 MGI:2670976
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fasciculation and elongation protein zeta 1 (zygin I) transcript_id : NM_183171.2

name	Pknox2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067109 GeneID:208076 MGI:2445415
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Pbx/knotted 1 homeobox 2 transcript_id : NM_148950.2

name	Pknox2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067111 GeneID:208076 MGI:2445415
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Pbx/knotted 1 homeobox 2 transcript_id : NM_001029838.1

name	LOC100042545 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259909 GeneID:100042545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042545 transcript_id : XM_001478478.1

name	1810021J13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981293 GeneID:66279 MGI:1913529
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 1810021J13 gene transcript_id : NM_025464.2

name	Slc37a2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142373673 GeneID:56857 MGI:1929693
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 37 (glycerol-3-phosphate transporter), member 2 transcript_id : NM_020258.3

name	LOC100042561 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259913 GeneID:100042561
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 244 ESTs, 3 Proteins product : similar to SEC61 gamma transcript_id : XM_001478520.1

name	Ccdc15 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487468 GeneID:245902 MGI:2444488
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 15 transcript_id : NM_001081429.1

name	Cdon (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946654 CCDS:CCDS22964.1 GeneID:57810 MGI:1926387
definition	GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0001708 - cell fate specification [Evidence IGI]; GO:0010172 - embryonic body morphogenesis [Evidence IGI] [Evidence IMP]; GO:0007520 - myoblast fusion [Evidence IMP]; GO:0016202 - regulation of striated muscle development [Evidence ISS]; GO:0007224 - smoothened signaling pathway [Evidence ISS] [Evidence IGI] codon_start : 1 exception : mismatches in translation note : immunoglobulin superfamily member CDO; CAM-related/down-regulated by oncogenes; oncogene-regulated cell adhesion molecule product : cell adhesion molecule-related/down-regulated by oncogenes protein_id : NP_067314.1

name	Ddx25 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304995 GeneID:30959 MGI:1353582
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] codon_start : 1 note : DEAD (aspartate-glutamate-alanine-aspartate) box polypeptide 25; gonadotropin-regulated testicular RNA helicase; DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 25 product : DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 protein_id : NP_038960.1

name	Pus3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981121 CCDS:CCDS22965.1 GeneID:67049 MGI:1914299
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0004730 - pseudouridylate synthase activity [Evidence IEA]; GO:0016439 - tRNA-pseudouridine synthase activity [Evidence IDA] GO_process : GO:0008033 - tRNA processing [Evidence IEA]; GO:0031119 - tRNA pseudouridine synthesis [Evidence IDA] codon_start : 1 exception : mismatches in translation product : pseudouridine synthase 3 protein_id : NP_075781.2

name	EG627480 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82929844 GeneID:627480 MGI:3643568
definition	codon_start : 1 product : similar to small cell adhesion glycoprotein protein_id : XP_897243.1

name	LOC100042442 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259900 GeneID:100042442
definition	codon_start : 1 product : similar to high mobility group nucleosomal binding domain 2 protein_id : XP_001478395.1

name	Svs7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9931973 CCDS:CCDS22967.1 GeneID:56872 MGI:1930790
definition	GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005516 - calmodulin binding [Evidence IEA] codon_start : 1 exception : mismatches in translation note : seminal vesicle protein, secretion 7; SVS VII product : caltrin protein_id : NP_064660.1

name	Gm846 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85701929 GeneID:330921 MGI:2685692
definition	codon_start : 1 product : hypothetical protein LOC330921 protein_id : NP_001028593.1

name	D730048I06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13386080 GeneID:68171 MGI:1915421
definition	codon_start : 1 product : hypothetical protein LOC68171 protein_id : NP_080869.1

name	9230110F15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20884471 GeneID:77080 MGI:1924330
definition	codon_start : 1 product : hypothetical protein LOC77080 protein_id : XP_134713.1

name	LOC100041605 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259868 GeneID:100041605
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476722.1

name	9230113P08Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259904 GeneID:77908 MGI:1925158
definition	codon_start : 1 product : hypothetical protein LOC77908 protein_id : XP_001478423.1

name	EG546123 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:63586379 GeneID:546123 MGI:3643162
definition	codon_start : 1 product : hypothetical protein protein_id : XP_620739.1

name	LOC100041618 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259870 GeneID:100041618
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476745.1

name	LOC100042485 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259908 GeneID:100042485
definition	codon_start : 1 product : similar to sc328 protein_id : XP_001478436.1

name	EG639025 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94386059 GeneID:639025 MGI:3647831
definition	codon_start : 1 product : hypothetical protein protein_id : XP_991355.1

name	LOC671003 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259872 GeneID:671003
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476783.1

name	EG434396 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702097 GeneID:434396 MGI:3647347
definition	codon_start : 1 product : hypothetical protein LOC434396 protein_id : NP_001028955.1

name	A630095E13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83776588 CCDS:CCDS22970.1 GeneID:235973 MGI:3055869
definition	codon_start : 1 product : secreted seminal vesicle Ly-6 protein 1 protein_id : NP_001028497.1

name	Acrv1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114326406 CCDS:CCDS22971.1 GeneID:11451 MGI:104590
definition	GO_component : GO:0001669 - acrosome [Evidence IDA] codon_start : 1 note : acrosomal vesicle protein 1 (MGD\|MGI:104590 GB\|NM_007391, evidence: BLASTN, 99%, match=1065); putative; acrosomal protein SP-10 product : acrosomal vesicle protein 1 protein_id : NP_031417.2

name	Chek1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542385 CCDS:CCDS22972.1 GeneID:12649 MGI:1202065
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0005657 - replication fork [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IMP]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0000077 - DNA damage checkpoint [Evidence IDA] [Evidence IMP]; GO:0006281 - DNA repair [Evidence IDA]; GO:0000086 - G2/M transition of mitotic cell cycle [Evidence IMP]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0006974 - response to DNA damage stimulus [Evidence IDA] codon_start : 1 note : rad27 homolog product : checkpoint kinase 1 homolog protein_id : NP_031717.2

name	Stt3a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560680 GeneID:16430 MGI:105124
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA] GO_function : GO:0004579 - dolichyl-diphosphooligosaccharide-protein glycotransferase activity [Evidence IEA]; GO:0004576 - oligosaccharyl transferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006486 - protein amino acid glycosylation [Evidence IEA] codon_start : 1 exception : mismatches in translation product : intergral membrane protein 1 protein_id : NP_032434.2

name	Ei24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6681289 CCDS:CCDS22973.1 GeneID:13663 MGI:108090
definition	codon_start : 1 product : etoposide induced 2.4 protein_id : NP_031941.1

name	Fez1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147207 GeneID:235180 MGI:2670976
definition	GO_component : GO:0005813 - centrosome [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA] GO_function : GO:0043015 - gamma-tubulin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 exception : mismatches in translation product : fasciculation and elongation protein zeta 1 (zygin I) protein_id : NP_898994.1

name	Pknox2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71067112 CCDS:CCDS22974.1 GeneID:208076 MGI:2445415
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0015630 - microtubule cytoskeleton [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0051015 - actin filament binding [Evidence IDA]; GO:0003785 - actin monomer binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : homeodomain containing transcription factor PREP2 product : Pbx/knotted 1 homeobox 2 protein_id : NP_001025009.1

name	Pknox2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71067110 CCDS:CCDS22974.1 GeneID:208076 MGI:2445415
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0015630 - microtubule cytoskeleton [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0051015 - actin filament binding [Evidence IDA]; GO:0003785 - actin monomer binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence ISS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : homeodomain containing transcription factor PREP2 product : Pbx/knotted 1 homeobox 2 protein_id : NP_683752.2

name	LOC100042545 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259910 GeneID:100042545
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478528.1

name	1810021J13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384878 CCDS:CCDS22975.1 GeneID:66279 MGI:1913529
definition	codon_start : 1 product : hypothetical protein LOC66279 protein_id : NP_079740.1

name	Slc37a2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560349 GeneID:56857 MGI:1929693
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0015169 - glycerol-3-phosphate transporter activity [Evidence ISS]; GO:0005215 - transporter activity [Evidence IEA] GO_process : GO:0006072 - glycerol-3-phosphate metabolism [Evidence ISS]; GO:0015794 - glycerol-3-phosphate transport [Evidence ISS]; GO:0006127 - glycerophosphate shuttle [Evidence ISS]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : cAMP inducible 2 protein; cAMP inducible gene 2; solute carrier family 37 (glycerol-3-phosphate transporter), member 1 product : solute carrier family 37 (glycerol-3-phosphate transporter), member 2 protein_id : NP_064654.2

name	LOC100042561 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259914 GeneID:100042561
definition	codon_start : 1 product : similar to SEC61 gamma protein_id : XP_001478570.1

name	Ccdc15 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487469 GeneID:245902 MGI:2444488
definition	codon_start : 1 product : coiled-coil domain containing 15 protein_id : NP_001074898.1

name	LOC627681 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149259873 GeneID:627681
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 ESTs, 6 Proteins product : similar to nucleolar protein 5A pseudo : _no_value transcript_id : XR_032917.1

clone name	MSMg01-140L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-409H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422H06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-078F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-276N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-386M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339L16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-400N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137L18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-447A10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-126N17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-337I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192O05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-186H07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-143K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-071N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537H11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-048F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100C21
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-171C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-298F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323P05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342A14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-261L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149F16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-463K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-135A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-278H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-456K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-112I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-354D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-186C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101C22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-233D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005H08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266H10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-176M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136O22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129D02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207L12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256F20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-265B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-048N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207N06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-108H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-276E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150L17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-277D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-221A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-114D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245K18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-300G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-182F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049J19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189J14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-097E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191A04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310P02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-331C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-305G15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151P04
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-117F22.b	B6Ng01-117F22.g
ACC	DH922128	DH922129
length	1,223	1,134
definition	DH922128\|Mus musculus domesticus DNA, BAC clone: B6Ng01-117F22, 5' end.	DH922129\|Mus musculus domesticus DNA, BAC clone: B6Ng01-117F22, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcagcaaagaagttactaggacagaaaggacagacttatccagata agggtttaccatgagaaaagttagggattcccaacgagacaggtttcttc attggaccctaagaattaaggcagaattatagagcataaataaattgttt gcctcagtccagttttgtttaatattatttaaaggggagaaatgttacct ccttccagcctagcaaggctggctattaccatccactgcttaagcagagc cacctgctgtgctgctcctttcatgtgccactacctgcctgaggcccaac ctgcctgaggccatactgattctcgtccaagattttccggagtttgcacc caactgcgatcttcgtgagttcccaacagaaggctgacctatctacttca aagaaactttgcatggctagggatgggcctcccctcttctttataaagtg tgtttgctgacattaaaaattgaaccttgatcagactgactgtcttggtt tcatctctctctcacgcctcctagcccccctcttctcttccagattccaa gatgcctttccatactagaacccagacatgtgagccactggccggacaca acacacattctcaccggcatctgctgtcgcctgagttttttgattttagc cattctgactggtatgtggaggaatctcagtgctgttttgatttccattt ccctgatggctaaggatgttgaacatttctttaggtgcttatctaccact ggacatgttccaaatgagaattctttgtttagtgttgtaccccattttaa agtagggttatttggttctctggtgtctaacttctgatgggcagcctggg acaagatccttcttgtttccacctgcaacccagagttgaccctgtgccac agctctccttacccaaatcctacttggagagagctggtctcgagagtgct ggggcactgtgaacaaatgtgagacatcacttctgcccatttgctgtcag aggacctgcccagagcatcgggatacaggacaaagaacgacaggacagat cttcagttgtctgtactctggagctgcggttgccacacagctctcatacc caattcacctcgagagaaagctcaggagtctacaccagcttacaagtcag ctcatcagagacagtcttcatcgaatacgatgcaaggcaggcgaactatg cacgaagagcagctcatgggtca	gaattctttccaacaatggcatgtaaattctagagcacagtcagattcac agttttctcatctcagtgtgatctactagtaactgtagactctgtgtggc agagagaaattcatctttccttggcagagaatgtctttcaattgtctctc attgattatttttgtgaggatcccagagtagaaaccctgcagttctctaa acctaggaacctgaatctagactgtaaaagaagagctgacaggtatgcac ccttgttgccttgatgaaaagccatttcatctctaaaaatccctttgtct tctcaacaaaatagttcagttatttctagcccacaatgctgtcagagaat tcaaagacaaaggtaaaaatcatagtagaataaaatatgtctaaatcaat gtaaggcattgttaaatatgtacaagttcctaagttataacagctacatc agagattctatatacctataacagttcttctttacaccttttggatcata gacacacagagtaggcaggtagggcatttgagcttctgtcttactctgtg tgtggtaaggggttacatgagattaaggtttggggaagtagtcttgtcag ataaatgagttccccattaactctctctccaccactgaaaaacatgacta ttttgctgcctatcaaccatgtaataataaaatttacaaatttataacca ggaatttcattttgtaattctagaagtaggactgtccatcactataaaga cttttggaccattctctgacctctctctggttgcctatacccagtcaggc catttacttttccatcatattccttatgatctgatatatttagggcataa gcttgacacaaaagagactgggaggaatttaacacatggtgactagagaa tggtaaggaacaaaatgatcacaaatagataaagtcatgtgattgcatat atagttgaacaatgcagggtgacaggtagaaaggtgttcagagagtcttg ctgttcatataaaatattttgtggtgtttcacagtaaagtggcagctgaa accaaaatgactgtaacaagaaatgtacatccgtggaacatataactaag tcctttcccacacacattcagtataccatccctt
quality values	Open. Hide. 61 47 43 38 61 38 24 47 61 55 61 61 61 61 61 37 47 61 61 61 61 59 61 61 59 52 43 32 59 49 30 36 44 59 59 59 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 59 59 59 55 59 59 59 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 47 49 50 50 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 53 61 61 61 47 61 61 61 61 61 61 47 47 36 57 53 57 53 53 53 57 53 53 47 53 53 45 57 53 53 57 57 57 57 57 53 57 57 53 53 57 57 35 27 47 53 57 53 40 53 53 36 57 53 53 53 57 53 53 57 57 57 53 53 53 53 57 53 53 53 53 53 52 57 57 53 57 57 53 57 52 52 57 53 57 52 45 57 57 57 57 57 57 52 52 38 57 57 53 36 38 46 41 28 52 57 53 53 57 46 47 53 57 57 43 53 41 52 53 57 57 52 31 52 53 46 37 53 53 50 53 50 40 57 35 53 57 37 57 57 53 40 50 38 53 52 37 39 34 46 38 35 23 28 33 46 57 52 34 57 57 35 50 36 45 10 52 39 31 52 33 57 37 53 57 37 34 52 51 52 44 57 57 37 42 40 53 36 53 37 53 52 36 39 44 40 35 37 30 37 37 44 45 45 31 24 30 41 53 29 20 24 37 34 44 37 37 53 48 25 44 25 30 41 40 32 46 45 32 21 46 31 32 36 38 46 17 47 47 32 30 30 33 39 39 28 31 46 51 30 36 51 33 34 33 6 13 31 17 9 32 31 27 46 47 29 29 20 29 29 29 29 28 29 51 28 40 27 29 29 28 31 29 18 27 27 29 32 38 26 29 46 31 28 28 24 26 29 28 32 51 28 29 23 13 25 28 34 28 20 33 26 31 29 32 14 43 31 51 30 24 33 22 28 20 23 29 31 21 23 24 36 28 25 12 29 22 30 31 26 29 16 27 16 25 29 28 29 23 14 10 21 22 29 24 33 25 29 18 23 34 31 23 28 26 23 16 26 17 21 19 29 26 29 27 20 17 16 26 41 15 30 14 29 18 23 25 26 31 15 21 28 22 16 44 7 27 9 28 26 15 20 28 39 38 28 16 10 30 13 33 14 18 28 13 11 22 31 12 21 27 23 19 34 19 24 32 9 32 22 16 20 34 20 28 27 17 20 18 20 9 30 44 29 6 18 13 8 3 6 13 11 5 6 4 5 11 17 29 27 16 26 23 9 10 28 9 30 13 9 5 23 33 6 10 10 8 9 5 19 9 29 18 4 23 13 17 33 29 4 3 7 6 5 20 13 5 8 4 23 15 11 30 12 11 29 10 6 24 13 18 6 11 10 12 10 19 16 9 11 5 12 5 5 4 12 14 15 15 10 9 5 4 5 16 11 6 4 4 8 11 15 15 4 2 7 7 8 13 12 10 22 9 7 4 5 10 15 23 9 19 12 11 4 5 4 4 3 8 23 13 3 3 2 5 4 9 6 5 3 2 8 23 8 9 4 3 7 5 14 8 14 11 3 3 5 18 4 1 1 8 5 4 6 16 9 4 2 2 2 12 10 7 17 6 4 1 3 3 3 6 3 7 3 3 5 5 7 7 11 3 12 5 10 6 8 5 13 20 7 17 7 13 4 3 3 13 4 5 12 8 5 5 4 5 6 11 5 6 11 5 8 8 9 1 3 5 3 9 4 12 3 4 1 1	Open. Hide. 61 61 59 59 59 59 59 55 44 59 27 27 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 44 55 59 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 59 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 59 59 59 61 61 61 61 61 61 59 61 59 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 47 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 47 61 61 53 61 52 53 50 53 57 57 50 57 57 57 53 50 57 53 57 57 53 57 53 57 57 53 52 57 57 53 53 53 53 53 47 57 53 57 57 53 57 53 57 43 57 57 40 53 53 47 57 57 53 40 53 53 53 45 53 57 57 42 47 28 43 52 53 32 42 20 57 57 57 57 47 47 53 57 42 50 53 45 50 50 50 57 57 45 53 52 38 57 35 53 57 53 52 57 53 42 53 53 42 47 47 43 50 53 41 50 53 50 53 53 53 52 52 53 43 35 38 27 43 52 42 53 53 52 36 25 41 53 53 50 42 53 53 52 33 42 52 33 57 57 57 38 38 53 42 28 46 52 50 44 42 30 41 53 53 40 47 47 47 33 46 42 40 40 50 33 26 33 37 32 41 46 30 45 23 41 41 35 31 33 33 45 28 46 39 57 24 53 57 53 33 44 57 52 33 31 53 57 51 53 52 33 32 40 42 53 30 38 33 35 41 48 30 40 36 16 47 40 24 39 44 29 15 25 28 41 35 40 39 43 34 40 32 57 37 37 33 24 28 57 57 44 33 32 31 18 44 26 29 32 30 30 37 31 32 34 16 37 31 29 30 31 30 29 35 41 48 32 35 30 17 44 30 30 30 24 22 30 25 28 37 28 33 20 31 32 22 29 24 29 51 29 32 35 43 51 46 32 25 29 25 37 32 29 29 29 29 29 28 38 30 29 29 30 28 29 27 29 29 29 35 22 29 29 29 30 51 29 29 29 51 31 18 25 29 24 41 27 22 26 30 29 28 20 15 29 29 41 39 41 20 43 15 28 22 28 29 46 25 31 22 29 21 26 18 51 33 23 22 26 21 28 22 29 29 33 34 35 21 23 28 25 23 29 30 29 27 21 29 30 19 29 14 20 20 23 25 22 21 46 36 21 29 27 25 28 22 22 29 21 51 19 11 26 6 30 19 19 51 33 11 28 34 19 23 28 26 28 33 18 22 25 21 17 24 23 28 20 28 19 19 25 19 22 33 22 19 8 30 17 33 19 8 29 36 25 5 13 19 12 5 10 15 19 33 16 20 35 13 5 9 11 12 8 33 8 6 8 12 4 13 15 19 31 23 29 33 16 10 16 12 12 30 9 6 7 6 8 5 4 4 9 20 8 30 34 7 12 8 12 8 9 25 9 42 20 22 13 11 10 15 7 18 36 7 31 13 19 31 18 9 6 10 7 7 7 4 3 4 4 6 26 32 24 15 10 4 8 7 7 6 4 4 9 11 7 19 15 27 6 1 4 4 11 8 7 3 3 14 5 7 14 14 5 7 5 5 9 4 7 4 4 7 6 8 13 2 3 4 5 4 4 8 11 20 10 4 5 3 5 6 10 7 4 6 7 18 14 12 4 7 9 13 6 5 6 15 14 12 4 12

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_36138466_36139605
seq2: B6Ng01-117F22.g_66_1199 (reverse)

seq1  AAGGGAT-GTATAACTTGATTGGTGTGTGGAAGAGAACTTAGTGATA-GT  48
      ||||||| |||||   ||| | |||||||| | || ||||||| ||| ||
seq2  AAGGGATGGTATA--CTGAAT-GTGTGTGGGAAAGGACTTAGTTATATGT  47

seq1  TCCACGGATGTTACATTTTCCTGCTAACAGTCATTTTGGTATCAGCTGCC  98
      |||||||||| |||||||  ||  | |||||||||||||| |||||||||
seq2  TCCACGGATG-TACATTT--CTTGTTACAGTCATTTTGGTTTCAGCTGCC  94

seq1  ACCTTTACTGTGAAACA-CAC-AAATA-TATATATGGAACAGCAAGACTC  145
      | ||||||||||||||| ||| ||||| | ||||| ||||||||||||||
seq2  A-CTTTACTGTGAAACACCACAAAATATTTTATAT-GAACAGCAAGACTC  142

seq1  TCTGAACACCCTTTCTACCTGTCACCCCTGCATTGTTCAACTATATATGC  195
      |||||||| ||||||||||||||| |||||||||||||||||||||||||
seq2  TCTGAACA-CCTTTCTACCTGTCA-CCCTGCATTGTTCAACTATATATGC  190

seq1  AATCACATGACTTTATCTTATTTGTGATCATTTTGTTCCTTACCATTCTC  245
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AATCACATGACTTTATC-TATTTGTGATCATTTTGTTCCTTACCATTCTC  239

seq1  TAGTCACCATGTGTTAAATTCCTCCCAGTCTCTTTTGTGTCAAGCTTATG  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACCATGTGTTAAATTCCTCCCAGTCTCTTTTGTGTCAAGCTTATG  289

seq1  CCCTAAATATATCAGATCATAAGGAATATGATGGAAAAGTAAATGGCCTG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAATATATCAGATCATAAGGAATATGATGGAAAAGTAAATGGCCTG  339

seq1  ACTGGGTATAGGCAACCAGAGAGAGGTCAGAGAATGGTCCAAAAGTCTTT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGTATAGGCAACCAGAGAGAGGTCAGAGAATGGTCCAAAAGTCTTT  389

seq1  ATAGTGATGGACAGTCCTACTTCTAGAATTACAAAATGAAATTCCTGGTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGATGGACAGTCCTACTTCTAGAATTACAAAATGAAATTCCTGGTT  439

seq1  ATAAATTTGTAAATTTTATTATTACATGGTTGATAGGCAGCAAAATAGTC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTGTAAATTTTATTATTACATGGTTGATAGGCAGCAAAATAGTC  489

seq1  ATGTTTTTCAGTGGTGGAGAGAGAGTTAATGGGGAACTCATTTATCTGAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTTCAGTGGTGGAGAGAGAGTTAATGGGGAACTCATTTATCTGAC  539

seq1  AAGACTACTTCCCCAAACCTTAATCTCATGTAACCCCTTACCACACACAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTACTTCCCCAAACCTTAATCTCATGTAACCCCTTACCACACACAG  589

seq1  AGTAAGACAGAAGCTCAAATGCCCTACCTGCCTACTCTGTGTGTCTATGA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGACAGAAGCTCAAATGCCCTACCTGCCTACTCTGTGTGTCTATGA  639

seq1  TCCAAAAGGTGTAAAGAAGAACTGTTATAGGTATATAGAATCTCTGATGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAGGTGTAAAGAAGAACTGTTATAGGTATATAGAATCTCTGATGT  689

seq1  AGCTGTTATAACTTAGGAACTTGTACATATTTAACAATGCCTTACATTGA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTATAACTTAGGAACTTGTACATATTTAACAATGCCTTACATTGA  739

seq1  TTTAGACATATTTTATTCTACTATGATTTTTACCTTTGTCTTTGAATTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGACATATTTTATTCTACTATGATTTTTACCTTTGTCTTTGAATTCT  789

seq1  CTGACAGCATTGTGGGCTAGAAATAACTGAACTATTTTGTTGAGAAGACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGCATTGTGGGCTAGAAATAACTGAACTATTTTGTTGAGAAGACA  839

seq1  AAGGGATTTTTAGAGATGAAATGGCTTTTCATCAAGGCAACAAGGGTGCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATTTTTAGAGATGAAATGGCTTTTCATCAAGGCAACAAGGGTGCA  889

seq1  TACCTGTCAGCTCTTCTTTTACAGTCTAGATTCAGGTTCCTAGGTTTAGA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTCAGCTCTTCTTTTACAGTCTAGATTCAGGTTCCTAGGTTTAGA  939

seq1  GAACTGCAGGGTTTCTACTCTGGGATCCTCACAAAAATAATCAATGAGAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGCAGGGTTTCTACTCTGGGATCCTCACAAAAATAATCAATGAGAG  989

seq1  ACAATTGAAAGACATTCTCTGCCAAGGAAAGATGAATTTCTCTCTGCCAC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTGAAAGACATTCTCTGCCAAGGAAAGATGAATTTCTCTCTGCCAC  1039

seq1  ACAGAGTCTACAGTTACTAGTAGATCACACTGAGATGAGAAAACTGTGAA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTCTACAGTTACTAGTAGATCACACTGAGATGAGAAAACTGTGAA  1089

seq1  TCTGACTGTGCTCTAGAATTTACATGCCATTGTTGGAAAGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGTGCTCTAGAATTTACATGCCATTGTTGGAAAGAATTC  1134

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information