BAC Information

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BAC

Clone NameB6Ng01-118B14
Chromosome9 (Build37)
Map Location 33,028,849 - 33,171,824
singlet/doubletdoublet
Overlap genenone
Upstream geneGrit, Kcnj5, Kcnj1, Fli1, LOC669759, LOC100041398, Ets1, LOC100041426
Downstream geneLOC100042343
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118B14.bB6Ng01-118B14.g
ACCDH922668DH922669
length1,1601,117
definitionDH922668|Mus musculus domesticus DNA, BAC clone: B6Ng01-118B14, 5' end.DH922669|Mus musculus domesticus DNA, BAC clone: B6Ng01-118B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,170,656 - 33,171,824)(33,028,849 - 33,029,992)
sequence
gaattcaaaaccagaactcaagcaggaaccaggaggcaggagcagattca
gaggctatagagtagagtagtgctacatacttgcttgcttctcgtggctt
tctcggcctgcttctttccagaactccggaccacaaacccagagatgaaa
cctcccacaatggcttaggctgtgcccatcaatcggtaattaaagaaaag
ccttacagatggatcttacagatctcatttaaagttccctcctttcagat
aagtctagttctagtcaagttgacataacactggccaatataattattaa
acaaaatgagtgagacttttaaaaaaaattgctaaaatccttagaagaac
aaatgagggtagggtcctcagaatccagtggatgatcccatccctatgta
catgttagcagcactaattagatttagtgagtttaaacaattagatagaa
aaatgagtgagaatgacatgaagttgggaggaagatgtgaagaacagaag
ggtctgatgagagtttgaggttggcagatatatgtgatattttgatagat
ttaaaaacaaacaagaacaagtccccatatttccttcagtttggagtcag
gtgagaaacatgcacataatttcacatgacaacttgcaaacatcaattct
agaccatgtggaaactgatttttgaagtgccactattactactattgtag
tacattattctcatcaccacaatgatagcaacaataattatataagaaac
aatgacagaatagtaaaggcattaattaggaagagtagcagtctcacttg
tccatataggtgtcttggtatatgtttatctttacttttagttacttttc
tattgctatactaaaacaccttgaccaaagccactaatagaaagttgaac
atgaaactcaagaagaagaagaacaacgtgtggatacttcagccctcctt
agaatggggaacaaaatacccatggaaaggagttacagagaaaaagtctg
gagctgagacagacgaaaggatcatcaagagactgtcccacacagggatc
atcccataatcagcaccaacgcagaccctatgcatatgcagcagatttgc
tgaaggacccttctatagcttttctcttgtgaagttatgccagtgctgca
aatacagaag
gaattctctgcacacgttcttactgcagtgcttctgagtgaaaacctgaa
aaccgtgtccatatattattatctctgcttgatgctcaaaagaagacaaa
aatacatctgcttcatagtattaattttaagggcgtggaaactcacatga
agacaggtaaatgaagtcctgggatcccacacataagggagtgacaaacc
actaagtttcatctacacctactaattctatttcattctttttttagtct
gtgaatggaatttctaataacttcacaaaatgtcagaaaacacatcctaa
tttttctctaaacatttgaaagttttccctgtgatccactacttcaatat
ataatcatgcattttttccctgaactcttctcttttagattaataattta
aaaatattttgattgtgtgtgtatgtgagctctctcaagcatgccaggct
gaggtcagtagacaaacacaaggagttggttctctctttacactatgaag
gcgctaggattctggcttaggtagccaggtttcatggtatgcaaataccc
attcagtgagccttctctatcatgcttacagacatcgtaagctcttgtca
tatttactcaaagaactttctatttaggcagtctttcccttgagaaatcc
aacactcagggcaagatctgaggacaaggtatcatgtgcatgtattgctt
tgtaataagtgttcaataactacccgctaaagaaagacattcttcagaca
cttctctaattgtttcctatcatctttctcattttgagctgtttacattt
cgaacactatgctcagcgcaattcatgaattctcacaaagacattccttt
gctctctgctctttccacaccaggaaattgagaaacaaaggcacaggcag
gatttcttctcacaaggacatagagcttattccttcatcagtccgatctc
aagccactatagtattttgcacagaccacccatcaatgtggtaatgggac
ttgagtgacccagagcttctggctcatgcctgcagtctcatcatagcccc
acaggggaatcagctagtcatagcatgcatcctcagacattcctccactg
ctgacagattcccagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_33170656_33171824
seq2: B6Ng01-118B14.b_44_1203 (reverse)

seq1  CTTCTGTATTTGCCAGGCACTGGCATAACCTCACAAGAG-AAAGCTATAG  49
      |||||||||||||   ||||||||||||| ||||||||| ||||||||||
seq2  CTTCTGTATTTGC--AGCACTGGCATAACTTCACAAGAGAAAAGCTATAG  48

seq1  CAGGGTCCCTTCAGCAAAATCTTGCTGGCATATGCAATAGTGTCTGCGTT  99
       ||||| |||||||| ||||| |||| |||||||| |||| ||||||| |
seq2  AAGGGT-CCTTCAGC-AAATC-TGCT-GCATATGC-ATAGGGTCTGCG-T  92

seq1  TGGTGGCTGATTATGGGATGGATCCCTGTGTGGGACAGTCTCTTGATGAT  149
      |||| |||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGGT-GCTGATTATGGGAT-GATCCCTGTGTGGGACAGTCTCTTGATGAT  140

seq1  CCTTTCGTCTGTCTCAGCTCCAGACTTTTTCTCTGTAACTCC-TTCCATG  198
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCTTTCGTCTGTCTCAGCTCCAGACTTTTTCTCTGTAACTCCTTTCCATG  190

seq1  GGTATTTTGTTCCCCATTCTAAGGAGGGCTGAAGTATCCACACGTTGTTC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTTTGTTCCCCATTCTAAGGAGGGCTGAAGTATCCACACGTTGTTC  240

seq1  TTTCTTCTTCTTGAGTTTCATGTTCAACTTTCTATTAGTGGCTTTGGTCA  298
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTCTTCTTCTTGAGTTTCATGTTCAACTTTCTATTAGTGGCTTTGGTCA  289

seq1  AGGTGTTTTAGTATAGCAATAGAAAAGTAACTAAAAGTAAAGATAAACAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTTTTAGTATAGCAATAGAAAAGTAACTAAAAGTAAAGATAAACAT  339

seq1  ATACCAAGACACCTATATGGACAAGTGAGACTGCTACTCTTCCTAATTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAGACACCTATATGGACAAGTGAGACTGCTACTCTTCCTAATTAA  389

seq1  TGCCTTTACTATTCTGTCATTGTTTCTTATATAATTATTGTTGCTATCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTACTATTCTGTCATTGTTTCTTATATAATTATTGTTGCTATCAT  439

seq1  TGTGGTGATGAGAATAATGTACTACAATAGTAGTAATAGTGGCACTTCAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTGATGAGAATAATGTACTACAATAGTAGTAATAGTGGCACTTCAA  489

seq1  AAATCAGTTTCCACATGGTCTAGAATTGATGTTTGCAAGTTGTCATGTGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGTTTCCACATGGTCTAGAATTGATGTTTGCAAGTTGTCATGTGA  539

seq1  AATTATGTGCATGTTTCTCACCTGACTCCAAACTGAAGGAAATATGGGGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGTGCATGTTTCTCACCTGACTCCAAACTGAAGGAAATATGGGGA  589

seq1  CTTGTTCTTGTTTGTTTTTAAATCTATCAAAATATCACATATATCTGCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTTGTTTGTTTTTAAATCTATCAAAATATCACATATATCTGCCA  639

seq1  ACCTCAAACTCTCATCAGACCCTTCTGTTCTTCACATCTTCCTCCCAACT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAAACTCTCATCAGACCCTTCTGTTCTTCACATCTTCCTCCCAACT  689

seq1  TCATGTCATTCTCACTCATTTTTCTATCTAATTGTTTAAACTCACTAAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTCATTCTCACTCATTTTTCTATCTAATTGTTTAAACTCACTAAAT  739

seq1  CTAATTAGTGCTGCTAACATGTACATAGGGATGGGATCATCCACTGGATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAGTGCTGCTAACATGTACATAGGGATGGGATCATCCACTGGATT  789

seq1  CTGAGGACCCTACCCTCATTTGTTCTTCTAAGGATTTTAGCAATTTTTTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGACCCTACCCTCATTTGTTCTTCTAAGGATTTTAGCAATTTTTTT  839

seq1  TAAAAGTCTCACTCATTTTGTTTAATAATTATATTGGCCAGTGTTATGTC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTCTCACTCATTTTGTTTAATAATTATATTGGCCAGTGTTATGTC  889

seq1  AACTTGACTAGAACTAGACTTATCTGAAAGGAGGGAACTTTAAATGAGAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGACTAGAACTAGACTTATCTGAAAGGAGGGAACTTTAAATGAGAT  939

seq1  CTGTAAGATCCATCTGTAAGGCTTTTCTTTAATTACCGATTGATGGGCAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGATCCATCTGTAAGGCTTTTCTTTAATTACCGATTGATGGGCAC  989

seq1  AGCCTAAGCCATTGTGGGAGGTTTCATCTCTGGGTTTGTGGTCCGGAGTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAAGCCATTGTGGGAGGTTTCATCTCTGGGTTTGTGGTCCGGAGTT  1039

seq1  CTGGAAAGAAGCAGGCCGAGAAAGCCACGAGAAGCAAGCAAGTATGTAGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGAAGCAGGCCGAGAAAGCCACGAGAAGCAAGCAAGTATGTAGC  1089

seq1  ACTACTCTACTCTATAGCCTCTGAATCTGCTCCTGCCTCCTGGTTCCTGC  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTCTACTCTATAGCCTCTGAATCTGCTCCTGCCTCCTGGTTCCTGC  1139

seq1  TTGAGTTCTGGTTTTGAATTC  1169
      |||||||||||||||||||||
seq2  TTGAGTTCTGGTTTTGAATTC  1160

seq1: chr9_33028849_33029992
seq2: B6Ng01-118B14.g_66_1182

seq1  GAATTCTCTGCACACGTTCTTACTGCAGTGCTTCTGAGTGAAAACCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCACACGTTCTTACTGCAGTGCTTCTGAGTGAAAACCTGAA  50

seq1  AACCGTGTCCATATATTATTATCTCTGCTTGATGCTCAAAAGAAGACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCGTGTCCATATATTATTATCTCTGCTTGATGCTCAAAAGAAGACAAA  100

seq1  AATACATCTGCTTCATAGTATTAATTTTAAGGGCGTGGAAACTCACATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATCTGCTTCATAGTATTAATTTTAAGGGCGTGGAAACTCACATGA  150

seq1  AGACAGGTAAATGAAGTCCTGGGATCCCACACATAAGGGAGTGACAAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGTAAATGAAGTCCTGGGATCCCACACATAAGGGAGTGACAAACC  200

seq1  ACTAAGTTTCATCTACACCTACTAATTCTATTTCATTCTTTTTTTAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGTTTCATCTACACCTACTAATTCTATTTCATTCTTTTTTTAGTCT  250

seq1  GTGAATGGAATTTCTAATAACTTCACAAAATGTCAGAAAACACATCCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGGAATTTCTAATAACTTCACAAAATGTCAGAAAACACATCCTAA  300

seq1  TTTTTCTCTAAACATTTGAAAGTTTTCCCTGTGATCCACTACTTCAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCTAAACATTTGAAAGTTTTCCCTGTGATCCACTACTTCAATAT  350

seq1  ATAATCATGCATTTTTTCCCTGAACTCTTCTCTTTTAGATTAATAATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCATGCATTTTTTCCCTGAACTCTTCTCTTTTAGATTAATAATTTA  400

seq1  AAAATATTTTGATTGTGTGTGTATGTGAGCTCTCTCAAGCATGCCAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTTGATTGTGTGTGTATGTGAGCTCTCTCAAGCATGCCAGGCT  450

seq1  GAGGTCAGTAGACAAACACAAGGAGTTGGTTCTCTCTTTACACTATGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCAGTAGACAAACACAAGGAGTTGGTTCTCTCTTTACACTATGAAG  500

seq1  GCGCTAGGATTCTGGCTTAGGTAGCCAGGTTTCATGGTATGCAAATACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCTAGGATTCTGGCTTAGGTAGCCAGGTTTCATGGTATGCAAATACCC  550

seq1  ATTCAGTGAGCCTTCTCTATCATGCTTACAGACATCGTAAGCTCTTGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGTGAGCCTTCTCTATCATGCTTACAGACATCGTAAGCTCTTGTCA  600

seq1  TATTTACTCAAAGAACTTTCTATTTAGGCAGTCTTTCCCTTGAGAAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACTCAAAGAACTTTCTATTTAGGCAGTCTTTCCCTTGAGAAATCC  650

seq1  AACACTCAGGGCAAGATCTGAGGACAAGGTATCATGTGCATGTATTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCAGGGCAAGATCTGAGGACAAGGTATCATGTGCATGTATTGCTT  700

seq1  TGTAATAAGTGTTCAATAACTACCCGCTAAAGAAAGACATTCTTCAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATAAGTGTTCAATAACTACCCGCTAAAGAAAGACATTCTTCAGACA  750

seq1  CTTCTCTAATTGTTTCCTATCATCTTTCTCATTTTGAGCTGTTTACATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTAATTGTTTCCTATCATCTTTCTCATTTTGAGCTGTTTACATTT  800

seq1  CGAACACTATGCTCAGCGCAATTCATGAATTCTCACAAAGACATTCCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACACTATGCTCAGCGCAATTCATGAATTCTCACAAAGACATTCCTTT  850

seq1  GCTCTCTGCTCTTTCCACACCAGGAAATTGAGAAACAAAGGCACAGGCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGCTCTTTCCACACCAGGAAATTGAGAAACAAAGGCACAGGCAG  900

seq1  GATTTCTTCTCACAAGGACATAGAGCTTATTCCTTCATCAGTCCGATCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCTTCTCACAAGGACATAGAGCTTATTCCTTCATCAGTCCGATCTC  950

seq1  AAGCCACTATAGTATTTTGCCACAAGACCACCCATCAATGTGGTAATGGG  1000
      ||||||||||||||||||| ||| ||||||||||||||||||||||||||
seq2  AAGCCACTATAGTATTTTG-CAC-AGACCACCCATCAATGTGGTAATGGG  998

seq1  ACCTGAGGTTGAACCCAAGAGC-TCTGGCTCATGGCCTGCAGTCCTCATC  1049
      || ||||  |||  || ||||| |||||||||| ||||||||| ||||||
seq2  ACTTGAG--TGA--CCCAGAGCTTCTGGCTCAT-GCCTGCAGT-CTCATC  1042

seq1  ATTAGGCCCCCCACCAGGGGAAATCAGCTAGTCAATAAGCATGCATTCCC  1099
      | |||   ||||| |||||| |||||||||||||   |||||||||   |
seq2  A-TAG---CCCCA-CAGGGG-AATCAGCTAGTCA--TAGCATGCAT---C  1081

seq1  TTCAGACCATTTCCCTCCACCTGGCTGACAGGGTATTCCCCAGTC  1144
       ||||| ||||  |||||||   ||||||||   ||| |||||||
seq2  CTCAGA-CATT--CCTCCAC--TGCTGACAG---ATT-CCCAGTC  1117