BAC Information

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BAC

Clone NameB6Ng01-118G02
Chromosome9 (Build37)
Map Location 115,688,700 - 115,819,296
singlet/doubletdoublet
Overlap geneGadl1
Upstream geneCmtm7, Cmtm8, Gpd1l, LOC100043813, Osbpl10, LOC100043812, Stt3b, LOC100039567, LOC670467, EG546164
Downstream geneEG668829, Tgfbr2, LOC100043817, LOC100043819, D730003K21Rik, Rbms3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118G02.bB6Ng01-118G02.g
ACCDH922874DH922875
length7211,048
definitionDH922874|Mus musculus domesticus DNA, BAC clone: B6Ng01-118G02, 5' end.DH922875|Mus musculus domesticus DNA, BAC clone: B6Ng01-118G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,818,736 - 115,819,296)(115,688,700 - 115,689,765)
sequence
gaattcacttggagagctgtaagacaatgtgagacaggccatctcagaaa
acaaggaggatgccaggcagtggtgacacacacctttaatcccagcactt
gggaagcagaggcaggtagatttctgaggtcgaggccagcttggtctata
gagtgagttccaggacagccagggctacaaagagaaatcctgtctcaaaa
gaaagaaaaaaagaaagaaagaaagaaagaaggaaggaaggaaggaagga
aggaaggaaggaagggaagaaagaaagaaagaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaagaaaggaaggaaggaaggaaggaagg
aaggaaggaaggaagaaagaaagaaagaaagaaagaaagaaagaaagaaa
gaagaaaagaaaagaaaaaggaaatgaagaaaagaaaagaaaaagaacac
aaggaggacagctcctgagaaaaaagtaccccaagggtgagttctggcct
tcacatctacatccatatgtacttgtatgtgtatacacacacacacacac
acacacacacacacacacacacacacaaacacatacagagaatgagacag
agacagagacagagcaaggcatgtgtaaagtgatggagaggtagttgtgt
tgtgagacactcaccttggaacagcaagagcagcggatgaattgaacaat
gttccttcctgcacagagtcc
gaattccagggatccacgtgccatccgattttaaagctatctaggtgaca
gcactgagaatggaggtggggtatatcaactatagtccatggagatatat
ccttgccaaagacagcagtggctgccaccatctaaaactatcagaaaact
aatagaggaggtttactgtgagaaatgacgtgggcatttaaatcatattg
gtttgaaaaggcaaaataaatcctgcttaaacaagaggctgcaaacaggg
ttactcagtggattaatcttggcaaataaaggataaagaattaggagcca
gggatgcagccctcttggttgattacgcacaaagccctgcctggattaca
tcccaggcagtgcataaagcaggtgtgggtgctgtatgcctgagaggcag
aggcaggaggcacagaagttcaaggtcatccttgactacataaataggtc
aagaccagcttcgactggaaattctgtcagacagattcctactggaatcg
gagaggttggcaggtcacattcttatagggcaaagcaaagtatttggata
tcactccaagaggccactagaagctgaacaattatgcaccatcacatact
gtcttagttagggttctactgctgtgaatagacaccatgaccgaggcatc
ttttataaggacaacatttaattgggacaggttcagaggttcagtctgtt
attatcaaggcaggaacatggagcatccaggcaggcatggtgtaggagga
gctaagagttcttttgctttggcatgaaggaaagaaactgtacaggtaca
agcagggagccttggctttatctagaggattaacactttgtgtcattttg
actaggtggggaaaggtttctgtgtgtgtgtgtgtgtattgggggcattg
ttaattggtgctaagcttggtgggaacctcttctcccactccaactgcca
tcatgtaagatacgtcagtacccctaaccctgtgagaggctgtagaaatg
actgtggagtacttttgctgttttatattaagggtctgaatgctcaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_115818736_115819296
seq2: B6Ng01-118G02.b_45_605 (reverse)

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTATACACATACAAGTACATATGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTATACACATACAAGTACATATGGA  50

seq1  TGTAGATGTGAAGGCCAGAACTCACCCTTGGGGTACTTTTTTCTCAGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATGTGAAGGCCAGAACTCACCCTTGGGGTACTTTTTTCTCAGGAG  100

seq1  CTGTCCTCCTTGTGTTCTTTTTCTTTTCTTTTCTTCATTTCCTTTTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTCCTTGTGTTCTTTTTCTTTTCTTTTCTTCATTTCCTTTTTCTT  150

seq1  TTCTTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTC  200

seq1  CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTTTCT  250

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCCTT  300

seq1  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCTTTCTTTCTTTCTTTCT  350

seq1  TTTTTTCTTTCTTTTGAGACAGGATTTCTCTTTGTAGCCCTGGCTGTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTTCTTTTGAGACAGGATTTCTCTTTGTAGCCCTGGCTGTCCT  400

seq1  GGAACTCACTCTATAGACCAAGCTGGCCTCGACCTCAGAAATCTACCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCACTCTATAGACCAAGCTGGCCTCGACCTCAGAAATCTACCTGC  450

seq1  CTCTGCTTCCCAAGTGCTGGGATTAAAGGTGTGTGTCACCACTGCCTGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTCCCAAGTGCTGGGATTAAAGGTGTGTGTCACCACTGCCTGGC  500

seq1  ATCCTCCTTGTTTTCTGAGATGGCCTGTCTCACATTGTCTTACAGCTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCCTTGTTTTCTGAGATGGCCTGTCTCACATTGTCTTACAGCTCTC  550

seq1  CAAGTGAATTC  561
      |||||||||||
seq2  CAAGTGAATTC  561

seq1: chr9_115688700_115689765
seq2: B6Ng01-118G02.g_67_1114

seq1  GAATTCCAGGGATCCACGTGCCATCCGATTTTAAAGCTATCTAGGTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGGATCCACGTGCCATCCGATTTTAAAGCTATCTAGGTGACA  50

seq1  GCACTGAGAATGGAGGTGGGGTATATCAACTATAGTCCATGGAGATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGAGAATGGAGGTGGGGTATATCAACTATAGTCCATGGAGATATAT  100

seq1  CCTTGCCAAAGACAGCAGTGGCTGCCACCATCTAAAACTATCAGAAAACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCCAAAGACAGCAGTGGCTGCCACCATCTAAAACTATCAGAAAACT  150

seq1  AATAGAGGAGGTTTACTGTGAGAAATGACGTGGGCATTTAAATCATATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGGAGGTTTACTGTGAGAAATGACGTGGGCATTTAAATCATATTG  200

seq1  GTTTGAAAAGGCAAAATAAATCCTGCTTAAACAAGAGGCTGCAAACAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAAAAGGCAAAATAAATCCTGCTTAAACAAGAGGCTGCAAACAGGG  250

seq1  TTACTCAGTGGATTAATCTTGGCAAATAAAGGATAAAGAATTAGGAGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCAGTGGATTAATCTTGGCAAATAAAGGATAAAGAATTAGGAGCCA  300

seq1  GGGATGCAGCCCTCTTGGTTGATTACGCACAAAGCCCTGCCTGGATTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGCAGCCCTCTTGGTTGATTACGCACAAAGCCCTGCCTGGATTACA  350

seq1  TCCCAGGCAGTGCATAAAGCAGGTGTGGGTGCTGTATGCCTGAGAGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGGCAGTGCATAAAGCAGGTGTGGGTGCTGTATGCCTGAGAGGCAG  400

seq1  AGGCAGGAGGCACAGAAGTTCAAGGTCATCCTTGACTACATAAATAGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGAGGCACAGAAGTTCAAGGTCATCCTTGACTACATAAATAGGTC  450

seq1  AAGACCAGCTTCGACTGGAAATTCTGTCAGACAGATTCCTACTGGAATCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCAGCTTCGACTGGAAATTCTGTCAGACAGATTCCTACTGGAATCG  500

seq1  GAGAGGTTGGCAGGTCACATTCTTATAGGGCAAAGCAAAGTATTTGGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTTGGCAGGTCACATTCTTATAGGGCAAAGCAAAGTATTTGGATA  550

seq1  TCACTCCAAGAGGCCACTAGAAGCTGAACAATTATGCACCATCACATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCAAGAGGCCACTAGAAGCTGAACAATTATGCACCATCACATACT  600

seq1  GTCTTAGTTAGGGTTCTACTGCTGTGAATAGACACCATGACCGAGGCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGTTAGGGTTCTACTGCTGTGAATAGACACCATGACCGAGGCATC  650

seq1  TTTTATAAGGACAACATTTAATTGGGACAGGTTCAGAGGTTCAGTCTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATAAGGACAACATTTAATTGGGACAGGTTCAGAGGTTCAGTCTGTT  700

seq1  ATTATCAAGGCAGGAACATGGAGCATCCAGGCAGGCATGGTGTAGGAGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAAGGCAGGAACATGGAGCATCCAGGCAGGCATGGTGTAGGAGGA  750

seq1  GCTAAGAGTTCTTTTGCTTTGGCATGAAGGAAAGAAACTGTACAGGTACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAGTTCTTTTGCTTTGGCATGAAGGAAAGAAACTGTACAGGTACA  800

seq1  AGCAGGGAGCCTTGGCTTTATCTAGAGGATTAACACTTTGTGTCATTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGAGCCTTGGCTTTATCTAGAGGATTAACACTTTGTGTCATTTTG  850

seq1  ACTAGGTGGGGAAAGGTTTCTGTGTGTGTGTGTGTGTATTGGGGGCATTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGTGGGGAAAGGTTTCTGTGTGTGTGTGTGTGTATTGGGGGCATTG  900

seq1  TTAATTGGTGCTAAGCTTGGTGGGAACCTCTTCTCCCACTCCAACTGCCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTGGTGCTAAGCTTGGTGGGAACCTCTTCTCCCACTCCAACTGCCA  950

seq1  ATTCATGTAAAGAATAACGTCAAGTAACCCCCTAACCCTGGTGAGAGGGC  1000
        |||||| ||||   ||||| ||||  ||||||||||| |||||| |||
seq2  --TCATGT-AAGA--TACGTC-AGTA--CCCCTAACCCT-GTGAGA-GGC  990

seq1  TGTAGAAAATGACTGTGGTAGGTACTTTTGCCTGTTTTTATATTTAGGGT  1050
      ||||| ||||||||||||   ||||||||| ||| ||||||||| |||||
seq2  TGTAG-AAATGACTGTGG--AGTACTTTTG-CTG-TTTTATATTAAGGGT  1035

seq1  TCTTGAATGCTTCAAC  1066
         ||||||| |||||
seq2  --CTGAATGC-TCAAC  1048