BAC Information

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BAC

Clone NameB6Ng01-118G12
Chromosome9 (Build37)
Map Location 85,029,737 - 85,030,396
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666669, LOC666672
Downstream geneBC023892, Ibtk, 4933431K14Rik, EG434426, 9330154J02Rik, Tpbg
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118G12.bB6Ng01-118G12.g
ACCDH922893DH922894
length1,260660
definitionDH922893|Mus musculus domesticus DNA, BAC clone: B6Ng01-118G12, 5' end.DH922894|Mus musculus domesticus DNA, BAC clone: B6Ng01-118G12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttttgtttctctatctaaggtaattgaaatttttgctgagtata
gtagcctgggttggcatttgttttctcttagtgtctgtttaacatctgtc
caggctcttctggctttcatagtctctggtgaaaaatctggtttaattct
gataggcttgcctttatatgttacttgacctttttcccttactgctttta
atattctatctttatttagtgcatttgttgttctgattattatgtgtcgt
gaggaatttcttttctggtccagtctatttggagttctgtaggcttcttg
aatgttcatgggcatctctttctttaggtttgggatgttttcttctatga
ttttgtttaagatatttgctggtggccctttatgttgaaaatcttcattc
ttatctacttctattatccgtaggtttggtcttctcattgtgtcctggat
ttcctggctgttttgagtcaggatctttttgcattttccattttctttga
ttgttgtgccaatgttctctatgggatcttctgtacctgagattctctct
tccatctcttgtattctgttgctgatgctcacatctatggctccagattt
ctttcctaggttttctgtctccagcgtggcctcactttgggttttcttta
ttgtgtttactgccctttttaggtcttgggtggttttattcaattccatc
acctgtttggtcatgttttcctgcaattctgtaagggatttttgtgcttc
ctctttaaggtcttctacctgtttagcagtgttctcttgtatttctttaa
gtgagttattaaagttcttctcgatgtcctctaccatcatcatgagatat
acttttaaatccgggtctatctttttgggtgtgttggggtgccctggact
gggtgaggttggagtgctgggttctgatgatggtgagtggtctggtttct
ggtaagtagattctacgtttaccttttgccatctgggtaatctctggcat
ttgttgatttagtgtctctagttagaagattgttccacttgtgatctgtt
agcctctaatcagcagactgggagacttgaaatcttctctatgttttcag
tgtcagaacacttcttctgcagcagctctccttttacattaaggtgccag
atatctgcattcgaccttcctctgccaagatgatatgtctatctgtatcc
ggttcataagcgtgtgtgctagggcgttcacgaaagtcgttagcctctcg
tggtatgata
gaattctaagagtgataaaccttgaatgtttctaagatgatagagaggag
taatttgtgtgggaactacactgattcccttgagcaacaacaatgaggaa
tgtggtaacagtttatgtaagtaccttggagaaccagagctgatgcaatg
atgagcaggaccatagatcagttgtgcatagatctttcaatactgctttc
tttgccccaattcttctatttaaggataaaagatcagttgtgcatagatc
tttcaatactgctttctttgccccaattcttctatttaaacataaagttc
atattaggaccccaaagatgaagttggggccacaagaccactctctcttc
ctccaatcaaggtattggaaagatacatttccttctctagtttttaccat
cactcatttctataactggtatattggccaagtgtagcttactggggctg
ctagacataagcacagtccagactcagtcaggagatttacagaggttatg
agaagatatggtgcttaagttaattcatgtactggtgggatatttcatca
gggaaaggatttatgtaggaaggtataggttggtttagtaggagggaaca
gctcaggcagaagaaaaaattatatatacatatatatgtatgtgtgtgtg
tgattgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_85029737_85030396
seq2: B6Ng01-118G12.g_68_727 (reverse)

seq1  CACACAATCACACACACACATACATATATATGTATATATAATTTTTTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAATCACACACACACATACATATATATGTATATATAATTTTTTCTT  50

seq1  CTGCCTGAGCTGTTCCCTCCTACTAAACCAACCTATACCTTCCTACATAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGAGCTGTTCCCTCCTACTAAACCAACCTATACCTTCCTACATAA  100

seq1  ATCCTTTCCCTGATGAAATATCCCACCAGTACATGAATTAACTTAAGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTCCCTGATGAAATATCCCACCAGTACATGAATTAACTTAAGCAC  150

seq1  CATATCTTCTCATAACCTCTGTAAATCTCCTGACTGAGTCTGGACTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTTCTCATAACCTCTGTAAATCTCCTGACTGAGTCTGGACTGTGC  200

seq1  TTATGTCTAGCAGCCCCAGTAAGCTACACTTGGCCAATATACCAGTTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCTAGCAGCCCCAGTAAGCTACACTTGGCCAATATACCAGTTATA  250

seq1  GAAATGAGTGATGGTAAAAACTAGAGAAGGAAATGTATCTTTCCAATACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGTGATGGTAAAAACTAGAGAAGGAAATGTATCTTTCCAATACC  300

seq1  TTGATTGGAGGAAGAGAGAGTGGTCTTGTGGCCCCAACTTCATCTTTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGGAGGAAGAGAGAGTGGTCTTGTGGCCCCAACTTCATCTTTGGG  350

seq1  GTCCTAATATGAACTTTATGTTTAAATAGAAGAATTGGGGCAAAGAAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAATATGAACTTTATGTTTAAATAGAAGAATTGGGGCAAAGAAAGC  400

seq1  AGTATTGAAAGATCTATGCACAACTGATCTTTTATCCTTAAATAGAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGAAAGATCTATGCACAACTGATCTTTTATCCTTAAATAGAAGAA  450

seq1  TTGGGGCAAAGAAAGCAGTATTGAAAGATCTATGCACAACTGATCTATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCAAAGAAAGCAGTATTGAAAGATCTATGCACAACTGATCTATGG  500

seq1  TCCTGCTCATCATTGCATCAGCTCTGGTTCTCCAAGGTACTTACATAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTCATCATTGCATCAGCTCTGGTTCTCCAAGGTACTTACATAAAC  550

seq1  TGTTACCACATTCCTCATTGTTGTTGCTCAAGGGAATCAGTGTAGTTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCACATTCCTCATTGTTGTTGCTCAAGGGAATCAGTGTAGTTCCC  600

seq1  ACACAAATTACTCCTCTCTATCATCTTAGAAACATTCAAGGTTTATCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAATTACTCCTCTCTATCATCTTAGAAACATTCAAGGTTTATCACT  650

seq1  CTTAGAATTC  660
      ||||||||||
seq2  CTTAGAATTC  660