BAC Information

Click to search

BAC

Clone NameB6Ng01-118O17
Chromosome9 (Build37)
Map Location 85,925,878 - 85,926,983
singlet/doubletsinglet
Overlap genenone
Upstream geneBC023892, Ibtk, 4933431K14Rik, EG434426, 9330154J02Rik, Tpbg
Downstream gene2610018I03Rik, Pgm3, Rwdd2, Mod1, Prss35, Snap91, C030002E08Rik, Cyb5r4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118O17.bB6Ng01-118O17.g
ACCDH923268DH923269
length1,2541,093
definitionDH923268|Mus musculus domesticus DNA, BAC clone: B6Ng01-118O17, 5' end.DH923269|Mus musculus domesticus DNA, BAC clone: B6Ng01-118O17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaaatagactggactagaaaagaaactcctcctgtcacataata
atcaacaccaaatgcactaaacaaagagagaatatgaaaagcagtaagga
caaaaggtcaagtaacctataaaggcagaccgatcataattacaccagac
ttctcaccagagactatgaaagctagaagatcctgggcagataacataca
gaccctaagagaacacaaatgcccgcctaggctactatacctagcaaaac
tctcaattaccatatatggagaaaccaagatattccatgacaaaaccaaa
tttacacaatatctttccataaatccagccctacaaaggataacagatgg
aaaacaccaatgcaaggagggaaactacaccctagaaaaaggaagaaagt
aatctttcaacaaagcaaaaagaaggtagatacacaaacataattccacc
tctaacaacgaaaatatcaggaagtaaaaaaatcacttttccttaatctc
tcttaacatcaaaggactcaacacccccaaatatatatattacaggacct
gcattttgctgcatacaggaaatgcacctcagtgacaaagacagccatta
tcccagagtaaaagtttggaaaacaattttccaagcaaatgaccccaaga
aataagctggagtagccattctaatatagaataaaatcaactttcaacca
aaagttataaaaaaaaagataaggaaggacccttcatactggtcaaagga
aaaatctaccaaggtgtactctcaattctgaacatctatgctccaaatgt
aagggcactcacattcataaaagaaactttactaaagctaaagcacacat
tgcacctcacacaataatagtgggagacttcaacaccccattctcagcaa
tgaacagatcatggaaacacaaagtaaacagaggcacagtgaaactaaca
aaagttctgaaacaaataggtttaacatatctatagaacatttgatccta
aaacaaaataatatgccttctctcagcacctcatggaaccttctccaatg
gccataatagtcagtcacaaaaacatgtctcaacagctacaagaacattt
gaaatatcacatgcatcttatcgaatcacccacagcctaaggcttaggtt
tgatacaacgaaacaagaaagccaaccataccatgagccgaccatgctct
acccaataatacctgggttaaggaagaattaaggaaggaaatttaatggc
tcta
gaattcatgttggctataaaaggagcagcaagtgaaagattatttgtcct
ggagcctctctttacttgctgctgtgggataccatggaaagacggctctt
gccagatgtcagcactttggtattgaacttctcagcttccagaagtgtga
ggaccagatagctttttcttaaaagtacacatctgtaagaccccataaag
cagaagatctcaacctgttgatcatgtcctcttggggagctgattgtccc
tttcacaggggtcacctaagaccactggaaaacacaaagatttacattac
aatttgtaacagtagcaaaattacagttataaagtagcaacaaaaataat
tttatggttgtgggtcaccacaaaatgaagaactatatgaaagggtcgca
gcattagggaggttgacaaacaccgccataaagccacacagaatagacta
agactctgtcagcgagtcataagatttaaaaaggtaatagtgttgaaaac
ttagcccagcatttggtccagagctaattgtgagcaaaccagataaaagt
aatgatgataaaaatgattatgatatcaacataccaaggatctgaaaaaa
aaaaaaacattatgctgcccattaaaaatctattagttacaggattgaat
tgttttacttctgtcctagatataattttatatattgcctcacttacatg
gggctcctgcaggagggatggctggtggcagacagtactgctgtttcttc
atctatgaaaagctagtatgtgggaagaaaggataaattatttggttggg
aaaggctagtgtttaggtgagtggacaaaataatacatgctttgcccagg
tgtgatttctgctgcctgacaattttttttaaggcagttcatgaagctgg
ggtaactaatctgacccagagccctattagtaagtcaatattttttctcc
gttttacagatagaggactgtgcaagacatgtaaatgtctctttcagtta
tagagagagtcaagcatgactacacattatttcttggagtatgattcaag
cattgcgtgtataattctgacatgagaaaactgaattgcattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_85925878_85926983
seq2: B6Ng01-118O17.g_70_1162 (reverse)

seq1  AAATGCATTTTCAGTTTTTCTCATTGTCAGAATTATACAACGCATGGCTT  50
      |||||||  ||||| |||||||| |||||||||||||| |||||  ||||
seq2  AAATGCA-ATTCAG-TTTTCTCA-TGTCAGAATTATAC-ACGCAATGCTT  46

seq1  TGAAATCAATACTC--AGAAATAAATGTGTAGTTCATGCCTGACTCTCTC  98
         |||| ||||||  |||||| ||||||||| |||||| ||||||||||
seq2  --GAATC-ATACTCCAAGAAAT-AATGTGTAG-TCATGCTTGACTCTCTC  91

seq1  TATAACCTTGAAAGAGACATTTACCATGTCTTGGCACAGTTCCTCTATCT  148
      ||||||  ||||||||||||||| |||||||| |||||| ||||||||||
seq2  TATAAC--TGAAAGAGACATTTA-CATGTCTT-GCACAG-TCCTCTATCT  136

seq1  GTAAAACGGAG-AAAAATATTGACTTTACTAATAGGGCTCTGGGTCAGAT  197
      ||||||||||| |||||||||||| |||||||||||||||||||||||||
seq2  GTAAAACGGAGAAAAAATATTGAC-TTACTAATAGGGCTCTGGGTCAGAT  185

seq1  TAGTTACCCCAGCTTCATGAACTGCCTTAAAAAAAATTGTCAGGCAGCAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTACCCCAGCTTCATGAACTGCCTTAAAAAAAATTGTCAGGCAGCAG  235

seq1  AAATCACACCTGGGCAAAGCATGTATTTATTTTGTCCACTCACCTAAACA  297
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAATCACACCTGGGCAAAGCATGTA-TTATTTTGTCCACTCACCTAAACA  284

seq1  CTAGCCTTTCCCAACCAAATAATTTATCCTTTCTTCCCACATACTAGCTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCTTTCCCAACCAAATAATTTATCCTTTCTTCCCACATACTAGCTT  334

seq1  TTCATAGATGAAGAAACAGCAGTACTGTCTGCCACCAGCCATCCCTCCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGATGAAGAAACAGCAGTACTGTCTGCCACCAGCCATCCCTCCTG  384

seq1  CAGGAGCCCCATGTAAGTGAGGCAATATATAAAATTATATCTAGGACAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCCCATGTAAGTGAGGCAATATATAAAATTATATCTAGGACAGA  434

seq1  AGTAAAACAATTCAATCCTGTAACTAATAGATTTTTAATGGGCAGCATAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAAACAATTCAATCCTGTAACTAATAGATTTTTAATGGGCAGCATAA  484

seq1  TGTTTTTTTTTTTTTCAGATCCTTGGTATGTTGATATCATAATCATTTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTTTTTTTTTCAGATCCTTGGTATGTTGATATCATAATCATTTTT  534

seq1  ATCATCATTACTTTTATCTGGTTTGCTCACAATTAGCTCTGGACCAAATG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCATTACTTTTATCTGGTTTGCTCACAATTAGCTCTGGACCAAATG  584

seq1  CTGGGCTAAGTTTTCAACACTATTACCTTTTTAAATCTTATGACTCGCTG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTAAGTTTTCAACACTATTACCTTTTTAAATCTTATGACTCGCTG  634

seq1  ACAGAGTCTTAGTCTATTCTGTGTGGCTTTATGGCGGTGTTTGTCAACCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGTCTTAGTCTATTCTGTGTGGCTTTATGGCGGTGTTTGTCAACCT  684

seq1  CCCTAATGCTGCGACCCTTTCATATAGTTCTTCATTTTGTGGTGACCCAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAATGCTGCGACCCTTTCATATAGTTCTTCATTTTGTGGTGACCCAC  734

seq1  AACCATAAAATTATTTTTGTTGCTACTTTATAACTGTAATTTTGCTACTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAAAATTATTTTTGTTGCTACTTTATAACTGTAATTTTGCTACTG  784

seq1  TTACAAATTGTAATGTAAATCTTTGTGTTTTCCAGTGGTCTTAGGTGACC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAATTGTAATGTAAATCTTTGTGTTTTCCAGTGGTCTTAGGTGACC  834

seq1  CCTGTGAAAGGGACAATCAGCTCCCCAAGAGGACATGATCAACAGGTTGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAAAGGGACAATCAGCTCCCCAAGAGGACATGATCAACAGGTTGA  884

seq1  GATCTTCTGCTTTATGGGGTCTTACAGATGTGTACTTTTAAGAAAAAGCT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTTCTGCTTTATGGGGTCTTACAGATGTGTACTTTTAAGAAAAAGCT  934

seq1  ATCTGGTCCTCACACTTCTGGAAGCTGAGAAGTTCAATACCAAAGTGCTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTCCTCACACTTCTGGAAGCTGAGAAGTTCAATACCAAAGTGCTG  984

seq1  ACATCTGGCAAGAGCCGTCTTTCCATGGTATCCCACAGCAGCAAGTAAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTGGCAAGAGCCGTCTTTCCATGGTATCCCACAGCAGCAAGTAAAG  1034

seq1  AGAGGCTCCAGGACAAATAATCTTTCACTTGCTGCTCCTTTTATAGCCAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTCCAGGACAAATAATCTTTCACTTGCTGCTCCTTTTATAGCCAA  1084

seq1  CATGAATTC  1106
      |||||||||
seq2  CATGAATTC  1093