BAC Information

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BAC

Clone NameB6Ng01-120L10
Chromosome9 (Build37)
Map Location 82,535,815 - 82,536,946
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC671392, 4930486G11Rik, LOC100039085
Downstream geneIrak1bp1, Phip, LOC100039144, Hmgn3, LOC100039159, 4930431B11Rik, EG619900, LOC100039186, LOC100039200, Sh3bgrl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120L10.bB6Ng01-120L10.g
ACCDH924587DH924588
length1,1311,052
definitionDH924587|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L10, 5' end.DH924588|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgccaatgcccagtgttaaatacacctaccttattactaaca
caatgcagaatgaatggagcgggcaaatgaatcacattggagaattcaac
tttgtaacagatagatggttgatagcaatctaagagaaatattttaagtt
ttcattaaataaagatgacagttgttttgatatgacgaaaccagcaaggt
catctttacaagtgaccttctttgctaggattgaaagtagttgatgaata
aaatattttagaatataaacggtaaagccaacttattttcttttcacctt
attagttagtgaataataccctcagtttatgatacaaagatataatttga
catacaatttcatgtactacaaacaaagttatttttaataaaaaggaatt
aaataatgctatcctacatttgagcaagttaggaatgctcatatgagtta
tttcaaagtggccagagaaagaaagttgggttctgcaatccagtgttcca
cactctcatttttaaatctggaatgtattgactttccattagcaggcaga
gacctagttagtacattgccagatataatagataggaatgcacaccaggt
actttattgtgcatggatgaactcacttatagccagagatgtgcctgagc
agaacacaggagatatatccccagagagtaacttcagggtcttgattatt
gttacagtatttcctatccagcccacttttcaacgccatgattgcagctg
actgtgctaacacacctaggtcttttttgttgttgttgttttgtcattga
aaagtcaataatatgactgggttcgttaatatataagcattctttctttc
ttccctgaagtcaccaaagtataggagtgttttcctttcattaacaggga
ttgggggaccttatgtaagaaaccacatggagagactgcctttagactct
cagctcatactcttagcctcatttgtttcttggctatcttaatctagctg
atacaaaggtagttgactaccagttataatactggaggtttctaggacag
gaggtatggtggggaaataaggccagattgcggcagattcaggcccaccc
ctccattcattggcatgacatcatctgctgc
gaattcctgatctttccaaaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaattgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttgggagactattaataacagcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctccctttttcatttctgattttgttaa
ttaggattttgtccctgtgccctttagtgagtctagctaagggttttatc
tatcttgttgattttctcaagaaccaactcctcgtttgtttaattctttg
aatagtcttcttgtttccacttgtttgatttcaccctgagtttgattatt
tcctgccgtctatcctcttgggtgatttgcttctttttttctagggcttt
tagatgtgttgccagctgctagtatgtgctgtctccatttcttctgggag
gcactcagagctatgagtttacctctagaatgcttcattgggtccatagg
ttgggtacgttgctgcttcttatcattagaccctcaaaaagcctctaaat
tc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_82535815_82536946
seq2: B6Ng01-120L10.b_48_1178

seq1  GAATTCACTGCCAATGCCCAGTGTTAAATACACCTACCTTATTACTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCCAATGCCCAGTGTTAAATACACCTACCTTATTACTAACA  50

seq1  CAATGCAGAATGAATGGAGCGGGCAAATGAATCACATTGGAGAATTCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGCAGAATGAATGGAGCGGGCAAATGAATCACATTGGAGAATTCAAC  100

seq1  TTTGTAACAGATAGATGGTTGATAGCAATCTAAGAGAAATATTTTAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACAGATAGATGGTTGATAGCAATCTAAGAGAAATATTTTAAGTT  150

seq1  TTCATTAAATAAAGATGACAGTTGTTTTGATATGACGAAACCAGCAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTAAATAAAGATGACAGTTGTTTTGATATGACGAAACCAGCAAGGT  200

seq1  CATCTTTACAAGTGACCTTCTTTGCTAGGATTGAAAGTAGTTGATGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTACAAGTGACCTTCTTTGCTAGGATTGAAAGTAGTTGATGAATA  250

seq1  AAATATTTTAGAATATAAACGGTAAAGCCAACTTATTTTCTTTTCACCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTTAGAATATAAACGGTAAAGCCAACTTATTTTCTTTTCACCTT  300

seq1  ATTAGTTAGTGAATAATACCCTCAGTTTATGATACAAAGATATAATTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTAGTGAATAATACCCTCAGTTTATGATACAAAGATATAATTTGA  350

seq1  CATACAATTTCATGTACTACAAACAAAGTTATTTTTAATAAAAAGGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAATTTCATGTACTACAAACAAAGTTATTTTTAATAAAAAGGAATT  400

seq1  AAATAATGCTATCCTACATTTGAGCAAGTTAGGAATGCTCATATGAGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGCTATCCTACATTTGAGCAAGTTAGGAATGCTCATATGAGTTA  450

seq1  TTTCAAAGTGGCCAGAGAAAGAAAGTTGGGTTCTGCAATCCAGTGTTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAAGTGGCCAGAGAAAGAAAGTTGGGTTCTGCAATCCAGTGTTCCA  500

seq1  CACTCTCATTTTTAAATCTGGAATGTATTGACTTTCCATTAGCAGGCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTCATTTTTAAATCTGGAATGTATTGACTTTCCATTAGCAGGCAGA  550

seq1  GACCTAGTTAGTACATTGCCAGATATAATAGATAGGAATGCACACCAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTAGTTAGTACATTGCCAGATATAATAGATAGGAATGCACACCAGGT  600

seq1  ACTTTATTGTGCATGGATGAACTCACTTATAGCCAGAGATGTGCCTGAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTATTGTGCATGGATGAACTCACTTATAGCCAGAGATGTGCCTGAGC  650

seq1  AGAACACAGGAGATATATCCCCAGAGAGTAACTTCAGGGTCTTGATTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACAGGAGATATATCCCCAGAGAGTAACTTCAGGGTCTTGATTATT  700

seq1  GTTACAGTATTTCCTATCCAGCCCACTTTTCAACGCCATGATTGCAGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGTATTTCCTATCCAGCCCACTTTTCAACGCCATGATTGCAGCTG  750

seq1  ACTGTGCTAACACACCTAGGTCTTTTTTGTTGTTGTTGTTTTGTCATTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACTGTGCTAACACACCTAGGTCTTTTTTGTTGTTGTTGTTTTGTCATTG-  799

seq1  AAAAGTCAATAATATGACTGGGTTCGTTAATATATAAGCATTCTTTCTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCAATAATATGACTGGGTTCGTTAATATATAAGCATTCTTTCTTT  849

seq1  CTTCCCTGAAGTTCACCAAAGTATAGGAGTGTTTTCCTTTCATTAACAGG  900
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTGAAG-TCACCAAAGTATAGGAGTGTTTTCCTTTCATTAACAGG  898

seq1  GATTGGGGGACCTTATGTAAGAAACCACATGGAGAGACTGCCTTTAGACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGGGACCTTATGTAAGAAACCACATGGAGAGACTGCCTTTAGACT  948

seq1  CTCAGGCTCATACTCTTAGCCTCATTTGTTTCTTGGCTATCTTAATCTTA  1000
      |||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCA-GCTCATACTCTTAGCCTCATTTGTTTCTTGGCTATCTTAATC-TA  996

seq1  GCTGAATAACAAAGGTAGTTGACTACCAGTTATAATACT-GAAGTTTCTA  1049
      |||||   ||||||||||||||||||||||||||||||| || |||||||
seq2  GCTGA--TACAAAGGTAGTTGACTACCAGTTATAATACTGGAGGTTTCTA  1044

seq1  AGACA-GAAGTATGGT-GTGAAATAA-GCCAGAATGCGGCCAGA-TCA-G  1094
       |||| || ||||||| | ||||||| |||||| ||||| |||| ||| |
seq2  GGACAGGAGGTATGGTGGGGAAATAAGGCCAGATTGCGG-CAGATTCAGG  1093

seq1  CCCACCACT-CATTCATTGGCATGACCATCATCTGCTGC  1132
      |||||| || ||||||||||||||| |||||||||||||
seq2  CCCACCCCTCCATTCATTGGCATGA-CATCATCTGCTGC  1131