BAC Information

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BAC

Clone NameB6Ng01-120O19
Chromosome9 (Build37)
Map Location 18,905,205 - 18,905,398
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665567, Chordc1, Naalad2, B020006M18Rik, Map1lc3-ps, Mbd3l2, Zfp558, Mbd3l1, Muc16, Olfr24, Olfr828, Olfr829, Olfr830, Olfr831-ps1, Olfr832, GA_x5J8B7W6RL5-13870817-13871726, Olfr834, Olfr835
Downstream geneOlfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1, GA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697, Olfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849, Olfr850, Olfr851, Olfr852-ps1, Olfr853, Olfr854, Olfr855, Zfp75, EG624341, LOC665751, Olfr857, Olfr858-ps1, Olfr58, Olfr859, Olfr860, GA_x5J8B7W6RL5-13004417-13003354, Olfr862, Olfr77, EG665823, Olfr863-ps1, Olfr864-ps1, Olfr865-ps1, Olfr866, Olfr867, Olfr868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120O19.bB6Ng01-120O19.g
ACCDH924739DH924740
length2441,162
definitionDH924739|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O19, 5' end.DH924740|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
agtactacaattactacaagaaactgtatttcttttcccttttttttttt
ttttggtttttttgtttgtttgtttgtttgttgttgttgtttggttggtt
tggtttggtttggttttttcgagacagggtttctctgtatagccctggtt
ttcctggagctcactttgtagaccaggctggcctcgaactcagaaattcg
cctgcctctgcctcccgagtgctgggattaaaggcatgcccggc
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtggcagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccattgtatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgcccacagtcagctaatggatggatcacagggctccaa
tgaggagctagagaagtaccaaggagctaaagggatctgcacctatagtg
gatcacattatgaactaaccagtaccccgagctctggactctagctgcaa
atgtatcaaagatggctagtccggccattactgggaagagagccattgaa
cacaaaccttatattgccaaaaggaacctcaggccaaagtggattgctgg
gtaggggaaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_18905205_18905398
seq2: B6Ng01-120O19.b_134_297 (reverse)

seq1  GCCGGGCATGGTGGCACACACCTTTAATCCCAGCACTCCAGAGGCAGAGG  50
      ||||||||||          ||||||||||||||||||  ||||||||||
seq2  GCCGGGCATG----------CCTTTAATCCCAGCACTCGGGAGGCAGAGG  40

seq1  CAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTTCCA  100
      |||||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGGCGAATTTCTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGCTCCA  90

seq1  GGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACAAAAATAAA  150
      ||| | ||||||||| |||||||||||||||||||             ||
seq2  GGAAAACCAGGGCTATACAGAGAAACCCTGTCTCG-------------AA  127

seq1  AAACCCAAACCAAACCAAACCACCACCACCACCAACAACAACAA  194
      ||| ||||||||||||||||||     ||||  |||||||||||
seq2  AAAACCAAACCAAACCAAACCA-----ACCA--AACAACAACAA  164