BAC Information

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BAC

Clone NameB6Ng01-121G18
Chromosome9 (Build37)
Map Location 21,228,161 - 21,228,702
singlet/doubletsinglet
Overlap genenone
Upstream geneZfp26, Zfp426, 5730601F06Rik, 7030419G21Rik, LOC100041205, 2210010B09Rik, 5730577I03Rik, Fbxl12, Ubl5, Pin1, Olfm2, Col5a3, Rdh8, A230050P20Rik, Angptl6, Ppan, Eif3s4, Dnmt1, Edg5, Mrpl4, Icam1, Icam4, Icam5, Glp1, B230118G17Rik, Raver1, Tyk2, Cdc37, Pde4a, Keap1, Edg8, Atg4d, BC021438, Cdkn2d, Ap1m2, Slc44a2, Ilf3, Qtrt1
Downstream geneDnm2, Tmed1, AB124611, Carm1, Yipf2, 1810026J23Rik, EG666043, Smarca4, Ldlr, Spc24, Ankrd25, Dock6, EG624219, Rab3d, BC010787, 2510048L02Rik, BC018242, 2310047B19Rik, Epor, Rgl3, C330001K17Rik, Prkcsh, Elavl3, Zfp653, Ecsit, EG625409, Cnn1, Elof1, Acp5, Pigyl, LOC100034724, 9530015I07Rik, 1810064F22Rik, Zfp809, BC050092, Zfp810, LOC100041826, EG625603, Anln, 9530077C05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121G18.bB6Ng01-121G18.g
ACCDH925110DH925111
length985927
definitionDH925110|Mus musculus domesticus DNA, BAC clone: B6Ng01-121G18, 5' end.DH925111|Mus musculus domesticus DNA, BAC clone: B6Ng01-121G18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaggctgtagtgaaaacccatattttagaaagcatcgcagtcg
ggcgtggtgtcgcgtgcctttaatcccagtactcgggaggcagaggcagg
cagatttctgagttcaaggccagcctggtctacagagtgagttccatgac
agccagggctatacagagaaacactgtctcgaaaaacaaaacaaaacaaa
acaaaacaaaaaaactaaaacaaaaaaacaaaaaaacaaaacaaagcaga
aagcatcgcagatcccaactctggaagaatcccagtgccagtgaaagatg
agtcgacacttctgcctcataaaggcgttctcaccctctcgtgcttattt
ctgtacgttacagagggtcaagtctacagttccattaagccaagcaagtg
ttttgcggatggctacaactgtaggtttatttttactttaattttttttt
tctcctagaccaatggctcagtacttgctgccttgggagccgactcaaat
ttggttcccagcacctgcatgacaactcacacaaccatcagtgattccag
ttccaggaatctgacaccctcgtctggcctccactagaaacagacacaga
cataatgcacataccgacatgcaggcaaaaaaaaaaaaaatccatgtaca
atttttttaatttacataaaataacagttaaaaagttttaaagatttatt
ttatttttatgcgcaccagatctgtgcccggtgcccacagaagtcaggaa
ggatcagattccctagaactggagttctggatggttttatatgagatttt
aaatgtgtgggtgctgggaacaacaactgttcttaaccactgagctgtct
ctctaaccccaaacttttcttttgcatgcatggtgtttggtcttgcagga
atattttgttcaccagagtcatgcaggaccaagaaaaccaaaagagggca
tcagatcctctcagactggagtacagttacagctg
gaattcactcctgagcaagacttattggtggatgcttgtgatcccagcta
ctctggaagctgaagtaggaggatctcaagttcaaggccagcctgaacta
taggactgttcaaagccacctagacaactaagtgagatcctttttgaaaa
taaaaaaggatgggaatctaacctggtggcagagtaaatgcctagcgtat
aagaggccctggtgagacagcacagcaggtctaaggacttgctgccaagg
ctgaggacctgagtgcaatcctgtggggaattgcaggctggtctccagtc
gagctggggtctgaacccgatggtcataattcacttacataacacggtag
gcgttccctcatgctcctggaaatctggcccctgcctaaggtaccacctc
ccacagcccccacaagagaagcatggtcagtagtcttgtaagcaatggcc
caagcttctgaccttcaggctaaactcctccccagttacatagcaacagt
gaagatcataaaaaggggtgctcagccccacctcgctctcttactctcac
actcttacctcttacccctcacttgcacactctctcctctctttgtcttc
tctctcctttctctctctctctctctctctctctctctctctctctctct
ctccctctccctctctctccactctttctttcgccctctctctttccccc
tggcttttctttgagtaaagctcgtaaaagaatagagaggctctgctctg
ctcctccagtttccctgcttactttgggtaatggttgggaactttttctc
ttcttcccgttctcacacaccctcggtggttttagcaagtaactccgggg
aggtccccagcgggctgccctttgcgcactcttttagaggggatagagat
agcccccctgatgaagggaagggaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_21228161_21228702
seq2: B6Ng01-121G18.b_48_589 (reverse)

seq1  ACTGATGGTTGTGTGAGTTGTCATGCAGGTGCTGGGAACCAAATTTGAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATGGTTGTGTGAGTTGTCATGCAGGTGCTGGGAACCAAATTTGAGT  50

seq1  CGGCTCCCAAGGCAGCAAGTACTGAGCCATTGGTCTAGGAGAAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTCCCAAGGCAGCAAGTACTGAGCCATTGGTCTAGGAGAAAAAAAAA  100

seq1  ATTAAAGTAAAAATAAACCTACAGTTGTAGCCATCCGCAAAACACTTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGTAAAAATAAACCTACAGTTGTAGCCATCCGCAAAACACTTGCT  150

seq1  TGGCTTAATGGAACTGTAGACTTGACCCTCTGTAACGTACAGAAATAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTAATGGAACTGTAGACTTGACCCTCTGTAACGTACAGAAATAAGC  200

seq1  ACGAGAGGGTGAGAACGCCTTTATGAGGCAGAAGTGTCGACTCATCTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAGGGTGAGAACGCCTTTATGAGGCAGAAGTGTCGACTCATCTTTC  250

seq1  ACTGGCACTGGGATTCTTCCAGAGTTGGGATCTGCGATGCTTTCTGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCACTGGGATTCTTCCAGAGTTGGGATCTGCGATGCTTTCTGCTTT  300

seq1  GTTTTGTTTTTTTGTTTTTTTGTTTTAGTTTTTTTGTTTTGTTTTGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTTTTGTTTTTTTGTTTTAGTTTTTTTGTTTTGTTTTGTTTT  350

seq1  GTTTTGTTTTTCGAGACAGTGTTTCTCTGTATAGCCCTGGCTGTCATGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTTCGAGACAGTGTTTCTCTGTATAGCCCTGGCTGTCATGGA  400

seq1  ACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCTGTAGACCAGGCTGGCCTTGAACTCAGAAATCTGCCTGCCTC  450

seq1  TGCCTCCCGAGTACTGGGATTAAAGGCACGCGACACCACGCCCGACTGCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCGAGTACTGGGATTAAAGGCACGCGACACCACGCCCGACTGCG  500

seq1  ATGCTTTCTAAAATATGGGTTTTCACTACAGCCTAAGAATTC  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTCTAAAATATGGGTTTTCACTACAGCCTAAGAATTC  542