BAC Information

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BAC

Clone NameB6Ng01-122K04
Chromosome9 (Build37)
Map Location 81,020,320 - 81,129,785
singlet/doubletdoublet
Overlap genenone
Upstream geneMyo6, Impg1, EG666534
Downstream geneLOC100039038, Htr1b, LOC671392, 4930486G11Rik, LOC100039085
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122K04.bB6Ng01-122K04.g
ACCDH926010DH926011
length9121,131
definitionDH926010|Mus musculus domesticus DNA, BAC clone: B6Ng01-122K04, 5' end.DH926011|Mus musculus domesticus DNA, BAC clone: B6Ng01-122K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,128,874 - 81,129,785)(81,020,320 - 81,021,454)
sequence
gaattctgtaattggctgaaaaaagttgatttccttatttctgtcacaat
gttggtgactggttcatcaacctccttggatgctatgattccctagggaa
ctgcttcttgccttctctgctcctcattacaattttaataacattattgg
agatccttagaaagaacaaaacagaacacctgagtatgcatactgaagaa
cccacatatagttgccaatgagtaataaaattagcctgatactgagaatc
ctggagctgtgtctctaggaagagttcaagcctgaatgctcttccctggc
actgcagatgctaaccaaggcttaggacctgaaagttgagattttaactc
tatgacacagcaaattttattgacactgcctatttttttctagaagctga
atttgttcttctagtagatatatatcatttacatgcataaagatttagaa
aaaaatgaaaaccatcttaccatttctcgaataaaccaacctatattaat
aaaaccacaaggctaaaattaaaaatgtgtttcttattctccctaaatgt
ctctagataatgagaaaggaagtcccactaaaaatctgctcaggacagaa
gacctgaggctacccactgactctaagaatctcggccagaatctcacagg
aatagactaaggatcactaaagaacatctcttaggtaatagaaagaaaaa
gaaagaaaaattaaaaatgtagaacagaaaaagaaagggcaaagtccatt
cagactgattagtcccaactagaggttactcagttcctactgtagagatc
aactgcagagaattcaatcattaagagaagagagcctaagaaaatgtcca
tgctattactccagcagtaaataatttatggcgggtttgggtatatatat
tttatgtggagg
gaattcactaagctccatagtaatctatttaacggaaagaggctcttgat
gagacatgccctccagaattttgctgtagaaaatgttgtcagtctaagca
actcattggacatctcaataagtttccataggaagctaaaaaggacattg
ttttatttgaaatgaaaaagttagaatataagctctataaatgagagcta
aaacaatcaacagtttcaattgtcccactaatttcaaacatcgtagtatc
ggatttaaaataaatacaagatacaaataacattatacagactgaattca
atgggttatacttggatatatatatatatatatatatatatatatatata
catatatgtaaatgtttgtatacatacatatatttacacccatatatgca
tcatatatatgcatcatatatatgtacacatatgtatatatatatatgta
tatacatttttatctatctatctatctatctatctatctaatagcaacta
ttgaaaaaataaggccataaatttgaaggagagcagtcagaattatatga
gggagtattggagggagaaaatggtgattaaaacacaatctctaaaatcc
tactgtctttaatattgtgacgaaaatgcaaagagtaaaatacaatcaga
tagcaatgactacaaaatagaagtgaccaatcagtggtgagaaacaaata
atggaacccataaaaatgcatgcatagtgatttaaatccttgagagcata
gaaaagcttcaagcagatttggacttggggttatctgtgtctgttttcct
cccttgaacctggcccatcattgctgtgctcaccttgcctgcagctgctt
ttgataaagctgtcattatcttcagacctgagctgagtccttaagtgcat
ctaccttttctctgagtgcttacatgagtggtttatctaacaggttacca
ctaagaatctgaaaacagagatgactcaaagtgaccaaggaccagaatta
aagcaaacctgtgggataatggcctatttcctgggaggagatgtcatgct
acataacttgcaagaactcttccctcttagaatctggcagatggattttg
actctggaccagagcaccgtgtctgaacctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_81128874_81129785
seq2: B6Ng01-122K04.b_49_960 (reverse)

seq1  CCTCCACATAAAATATATATACCCAAACCCGCCATAAATTATTTACTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACATAAAATATATATACCCAAACCCGCCATAAATTATTTACTGCT  50

seq1  GGAGTAATAGCATGGACATTTTCTTAGGCTCTCTTCTCTTAATGATTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAATAGCATGGACATTTTCTTAGGCTCTCTTCTCTTAATGATTGAA  100

seq1  TTCTCTGCAGTTGATCTCTACAGTAGGAACTGAGTAACCTCTAGTTGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGCAGTTGATCTCTACAGTAGGAACTGAGTAACCTCTAGTTGGGA  150

seq1  CTAATCAGTCTGAATGGACTTTGCCCTTTCTTTTTCTGTTCTACATTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCAGTCTGAATGGACTTTGCCCTTTCTTTTTCTGTTCTACATTTTT  200

seq1  AATTTTTCTTTCTTTTTCTTTCTATTACCTAAGAGATGTTCTTTAGTGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTCTTTCTTTTTCTTTCTATTACCTAAGAGATGTTCTTTAGTGAT  250

seq1  CCTTAGTCTATTCCTGTGAGATTCTGGCCGAGATTCTTAGAGTCAGTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAGTCTATTCCTGTGAGATTCTGGCCGAGATTCTTAGAGTCAGTGGG  300

seq1  TAGCCTCAGGTCTTCTGTCCTGAGCAGATTTTTAGTGGGACTTCCTTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTCAGGTCTTCTGTCCTGAGCAGATTTTTAGTGGGACTTCCTTTCT  350

seq1  CATTATCTAGAGACATTTAGGGAGAATAAGAAACACATTTTTAATTTTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCTAGAGACATTTAGGGAGAATAAGAAACACATTTTTAATTTTAG  400

seq1  CCTTGTGGTTTTATTAATATAGGTTGGTTTATTCGAGAAATGGTAAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGGTTTTATTAATATAGGTTGGTTTATTCGAGAAATGGTAAGATG  450

seq1  GTTTTCATTTTTTTCTAAATCTTTATGCATGTAAATGATATATATCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCATTTTTTTCTAAATCTTTATGCATGTAAATGATATATATCTACT  500

seq1  AGAAGAACAAATTCAGCTTCTAGAAAAAAATAGGCAGTGTCAATAAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAACAAATTCAGCTTCTAGAAAAAAATAGGCAGTGTCAATAAAATT  550

seq1  TGCTGTGTCATAGAGTTAAAATCTCAACTTTCAGGTCCTAAGCCTTGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGTCATAGAGTTAAAATCTCAACTTTCAGGTCCTAAGCCTTGGTT  600

seq1  AGCATCTGCAGTGCCAGGGAAGAGCATTCAGGCTTGAACTCTTCCTAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCTGCAGTGCCAGGGAAGAGCATTCAGGCTTGAACTCTTCCTAGAG  650

seq1  ACACAGCTCCAGGATTCTCAGTATCAGGCTAATTTTATTACTCATTGGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTCCAGGATTCTCAGTATCAGGCTAATTTTATTACTCATTGGCA  700

seq1  ACTATATGTGGGTTCTTCAGTATGCATACTCAGGTGTTCTGTTTTGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATATGTGGGTTCTTCAGTATGCATACTCAGGTGTTCTGTTTTGTTCT  750

seq1  TTCTAAGGATCTCCAATAATGTTATTAAAATTGTAATGAGGAGCAGAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGGATCTCCAATAATGTTATTAAAATTGTAATGAGGAGCAGAGAA  800

seq1  GGCAAGAAGCAGTTCCCTAGGGAATCATAGCATCCAAGGAGGTTGATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAAGCAGTTCCCTAGGGAATCATAGCATCCAAGGAGGTTGATGAA  850

seq1  CCAGTCACCAACATTGTGACAGAAATAAGGAAATCAACTTTTTTCAGCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCACCAACATTGTGACAGAAATAAGGAAATCAACTTTTTTCAGCCA  900

seq1  ATTACAGAATTC  912
      ||||||||||||
seq2  ATTACAGAATTC  912

seq1: chr9_81020320_81021454
seq2: B6Ng01-122K04.g_67_1197

seq1  GAATTCACTAAGCTCCATAGTAATCTATTTAACGGAAAGAGGCTCTTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAAGCTCCATAGTAATCTATTTAACGGAAAGAGGCTCTTGAT  50

seq1  GAGACATGCCCTCCAGAATTTTGCTGTAGAAAATGTTGTCAGTCTAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACATGCCCTCCAGAATTTTGCTGTAGAAAATGTTGTCAGTCTAAGCA  100

seq1  ACTCATTGGACATCTCAATAAGTTTCCATAGGAAGCTAAAAAGGACATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTGGACATCTCAATAAGTTTCCATAGGAAGCTAAAAAGGACATTG  150

seq1  TTTTATTTGAAATGAAAAAGTTAGAATATAAGCTCTATAAATGAGAGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGAAATGAAAAAGTTAGAATATAAGCTCTATAAATGAGAGCTA  200

seq1  AAACAATCAACAGTTTCAATTGTCCCACTAATTTCAAACATCGTAGTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATCAACAGTTTCAATTGTCCCACTAATTTCAAACATCGTAGTATC  250

seq1  GGATTTAAAATAAATACAAGATACAAATAACATTATACAGACTGAATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTAAAATAAATACAAGATACAAATAACATTATACAGACTGAATTCA  300

seq1  ATGGGTTATACTTGGATATATATATATATATATATATATATATATATATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTATACTTGGATATATATATATATATATATATATATATATATATA  350

seq1  CATATATGTAAATGTTTGTATACATACATATATTTACACCCATATATGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATGTAAATGTTTGTATACATACATATATTTACACCCATATATGCA  400

seq1  TCATATATATGCATCATATATATGTACACATATGTATATATATATATGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATATATGCATCATATATATGTACACATATGTATATATATATATGTA  450

seq1  TATACATTTTTATCTATCTATCTATCTATCTATCTATCTAATAGCAACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATTTTTATCTATCTATCTATCTATCTATCTATCTAATAGCAACTA  500

seq1  TTGAAAAAATAAGGCCATAAATTTGAAGGAGAGCAGTCAGAATTATATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAATAAGGCCATAAATTTGAAGGAGAGCAGTCAGAATTATATGA  550

seq1  GGGAGTATTGGAGGGAGAAAATGGTGATTAAAACACAATCTCTAAAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTATTGGAGGGAGAAAATGGTGATTAAAACACAATCTCTAAAATCC  600

seq1  TACTGTCTTTAATATTGTGACGAAAATGCAAAGAGTAAAATACAATCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTTTAATATTGTGACGAAAATGCAAAGAGTAAAATACAATCAGA  650

seq1  TAGCAATGACTACAAAATAGAAGTGACCAATCAGTGGTGAGAAACAAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATGACTACAAAATAGAAGTGACCAATCAGTGGTGAGAAACAAATA  700

seq1  ATGGAACCCATAAAAATGCATGCATAGTGATTTAAATCCTTGAGAGCATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACCCATAAAAATGCATGCATAGTGATTTAAATCCTTGAGAGCATA  750

seq1  GAAAAGCTTCAAGCAGATTTGGACTTGGGGTTATCTGTGTCTGTTTTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTTCAAGCAGATTTGGACTTGGGGTTATCTGTGTCTGTTTTCCT  800

seq1  CCCTTGAACCTGGCCCATCATTGCTGTGCTCAACCTTGCCTGCAGCTGCT  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCTTGAACCTGGCCCATCATTGCTGTGCTC-ACCTTGCCTGCAGCTGCT  849

seq1  TTTGATAAAAGCTGTCATTATCTTCAGACCTGAGCTGAGTCTCTAAGTGC  900
      |||||| ||||||||||||||||||||||||||||||||||  |||||||
seq2  TTTGAT-AAAGCTGTCATTATCTTCAGACCTGAGCTGAGTCCTTAAGTGC  898

seq1  ATCTACC-TTTCTCTGAGTGCTTACATGAGTGGTTTATCTAACAGGTTAC  949
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACCTTTTCTCTGAGTGCTTACATGAGTGGTTTATCTAACAGGTTAC  948

seq1  CACTAAGAATCTG-AGACAGAGATGACTCAAAGTGACCAAAGACCAGAAT  998
      ||||||||||||| | |||||||||||||||||||||||| |||||||||
seq2  CACTAAGAATCTGAAAACAGAGATGACTCAAAGTGACCAAGGACCAGAAT  998

seq1  TAAAGCAAACCTGTGGGATAATTGCCCTATTTCCTGGGAGGAGAATGTTC  1048
      ||||||||||||||||||||| || |||||||||||||||||| ||| ||
seq2  TAAAGCAAACCTGTGGGATAA-TGGCCTATTTCCTGGGAGGAG-ATG-TC  1045

seq1  ATGCTACATAACTTGACAGGAACT-TTCCCTCTT-GACTCTGGGCAGATT  1096
      ||||||||||||||| || ||||| ||||||||| || ||| ||||||| 
seq2  ATGCTACATAACTTG-CAAGAACTCTTCCCTCTTAGAATCT-GGCAGATG  1093

seq1  GATTTTTGACTTCTGGGACAGAGCACTGTGTCTG-ACCTC  1135
      || ||||||| |||||  |||||||| ||||||| |||||
seq2  GA-TTTTGAC-TCTGGACCAGAGCACCGTGTCTGAACCTC  1131