BAC Information

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BAC

Clone NameB6Ng01-124M02
Chromosome9 (Build37)
Map Location 80,746,313 - 80,747,489
singlet/doubletsinglet
Overlap genenone
Upstream geneFilip1, LOC100041218, LOC666490, Senp6, LOC100041249, Myo6, Impg1
Downstream geneEG666534, LOC100039038, Htr1b, LOC671392
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124M02.bB6Ng01-124M02.g
ACCDH927582DH927583
length1,1731,249
definitionDH927582|Mus musculus domesticus DNA, BAC clone: B6Ng01-124M02, 5' end.DH927583|Mus musculus domesticus DNA, BAC clone: B6Ng01-124M02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacagcatcattgtaagttctctcaatgtaaaagggcagtctaa
aacaggatgccaatagtaaggcctgtcttctcaaactcagcccagagctt
caatgcccttcccgcttgccctccaggcacagtccctgttatccctaaca
ctcattcctagtgtttgcaatttatccccctcaccaagggactggagaaa
agagttaagactatttgatgtagagactgagatattagaaaactttgtga
aagttttgtaattacttcacctgaacataaaattagagtcttcggcaaat
tagtttaaaaaatattggaaactcggtggctgttcagaatatattatatt
ggattaaatttcgcttacccaaataagccacccatacttatctgggataa
tgtatgcataaataaatataacttaaataattaatttgaacaaaattaat
tacactacagagtagccattgaaggttcagtcacagtttgctttccttgc
cgaagggaaatgaaggacttcagggaggtgggacagaagatactaagtct
ttgttttgaatcaaatgataagtgttcatttataataaagaaatcacact
acgtcttaaaaaatatctagagctgagtgtggtaacacacatgctaatat
tactaatcagaaaactaaagcaggaatcacaacttagagaaaaacctaaa
ctacatgtggagaccagctacagaaagaaaaataagcagaagataataaa
taaagccagtctgatatcagctgttcaaatacagggacagcatagaaaac
aatatttaaaaaatcaccctagtaatatttttagccaaaaattatcctta
aggatgtaaataccaggctaaagcaagcaaaaatcagtaaaataaccaca
gcagacgaattcataaataaagttcaccaaaacacatataattgaccaca
actctacagatgaatgcatttctccttgaagtgacaggcctgcataactg
tttcctcccaggactctctgcagtccatgtccctttggcatcttcagcat
ctcttgtcttcagcagcttctaaaaattgaactggaagcagagagtgact
agatccacattccctcctggaagcttcctcttaagagcctgctacaagtc
ctaaaaaataacacagcaaggca
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaggcca
gagacactgaaatttatagaggacaaagtgggaaaagccttgaagatatg
ggcacaggggaaaaattcctgaatgaacaacaatggcttgtgctgtaaga
tcgagaattgacaaatgggacctcataaaattgcaaaacttttgtaaggc
aaaagacactgtcaataagacaaaaaggccatcaacagattgggaaagga
tctttacctatcctaaatcagatagggaactaatatccaatatatatcaa
gaactcaagaagatagactccaaaaaaatcaaataaccccattaaaaatg
gggtgcagatcttaacaaataattctcacctgaggaatactgaatggctg
agaagtccctgaaaaaatgttcagcatccttaatcatcagggaaatgcaa
atcaaaacaacactgagattccacctcacaccagtcagaatggctaagat
caaaaattcaggtgacatcagatgatggctaggatgtggagaaagaggaa
cactcctccattgttggtgggattgcaagcttgtacaaacactctcgaaa
tcagtctggtggttcctcagaaaattggacatagttctactggaggatcc
tgaaatacctctcctgggcatatatccagaagatgttccaactggtataa
ggacacatgctccactatgttcatagcagccttatttataatagccagaa
gctggaaagaacccagatgcccctcaacagaggaatggatacagaaaatg
tggtacatttacacattggagtactactcagctattaaaaagaatgaatt
tatgaaattcctagccaaatggatggacttggagggcaacatcttgagtg
gaggtaacccatttacaaaagtactccacatgaatattgtacctcactga
taggtggaatattagcccagaaacttagaatacccagatattaagataca
atttggtgaaactcatgaactcaagagaacgagaccaaagtatgtacact
ttgcccttcttagattgggaacaaacacccttggaggagttacagagaca
tagtttggaagctgaaatgaagggaggacatctaggactgccatatccag
ggattaccatccctaattcgactcaaccgctgtcaaccaattgctagtac
atctggactagatttgttgtcctggaatagagactcctgctgtagtatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_80746313_80747489
seq2: B6Ng01-124M02.b_45_1217 (reverse)

seq1  TGCCTTGCTTGTGTTA-TTTATAGGACTTGGTAGCAGGCTCTT-AGAGGA  48
      |||||||| ||||||| ||| |||||||| ||||||||||||| ||||||
seq2  TGCCTTGC-TGTGTTATTTTTTAGGACTT-GTAGCAGGCTCTTAAGAGGA  48

seq1  AGCCTCCAGGAGGG-ATGTGGGATCTAGTCACTTCTCTGCTTCCAGTTCA  97
      ||| |||||||||| |||| |||||||||||| |||||||||||||||||
seq2  AGCTTCCAGGAGGGAATGT-GGATCTAGTCAC-TCTCTGCTTCCAGTTCA  96

seq1  ATTTTTTAGAGCTGCTGAAGACAAGAGATGGCTGAGGATGCCCAAGGGGA  147
      ||||||   |||||||||||||||||||| ||||| |||| |||| ||||
seq2  ATTTTTAGAAGCTGCTGAAGACAAGAGAT-GCTGAAGATG-CCAAAGGGA  144

seq1  CATGGACTGCAGAGAGTCCTGGGAGGAAACAGTTATGCAGGCCTTGTCAC  197
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CATGGACTGCAGAGAGTCCTGGGAGGAAACAGTTATGCAGGCC-TGTCAC  193

seq1  TTCAAGGAGAAATGCATTCATCTGTAGAGTTGTGGTCAATTATATGTGTT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGAGAAATGCATTCATCTGTAGAGTTGTGGTCAATTATATGTGTT  243

seq1  TTGGTGAACTTTATTTATGAATTCGTCTGCTGTGGTTATTTTACTGATTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGAACTTTATTTATGAATTCGTCTGCTGTGGTTATTTTACTGATTT  293

seq1  TTGCTTGCTTTAGCCTGGTATTTACATCCTTAAGGATAATTTTTGGCTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGCTTTAGCCTGGTATTTACATCCTTAAGGATAATTTTTGGCTAA  343

seq1  AAATATTACTAGGGTGATTTTTTAAATATTGTTTTCTATGCTGTCCCTGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTACTAGGGTGATTTTTTAAATATTGTTTTCTATGCTGTCCCTGT  393

seq1  ATTTGAACAGCTGATATCAGACTGGCTTTATTTATTATCTTCTGCTTATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACAGCTGATATCAGACTGGCTTTATTTATTATCTTCTGCTTATT  443

seq1  TTTCTTTCTGTAGCTGGTCTCCACATGTAGTTTAGGTTTTTCTCTAAGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTGTAGCTGGTCTCCACATGTAGTTTAGGTTTTTCTCTAAGTT  493

seq1  GTGATTCCTGCTTTAGTTTTCTGATTAGTAATATTAGCATGTGTGTTACC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCCTGCTTTAGTTTTCTGATTAGTAATATTAGCATGTGTGTTACC  543

seq1  ACACTCAGCTCTAGATATTTTTTAAGACGTAGTGTGATTTCTTTATTATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCAGCTCTAGATATTTTTTAAGACGTAGTGTGATTTCTTTATTATA  593

seq1  AATGAACACTTATCATTTGATTCAAAACAAAGACTTAGTATCTTCTGTCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACACTTATCATTTGATTCAAAACAAAGACTTAGTATCTTCTGTCC  643

seq1  CACCTCCCTGAAGTCCTTCATTTCCCTTCGGCAAGGAAAGCAAACTGTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCCTGAAGTCCTTCATTTCCCTTCGGCAAGGAAAGCAAACTGTGA  693

seq1  CTGAACCTTCAATGGCTACTCTGTAGTGTAATTAATTTTGTTCAAATTAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACCTTCAATGGCTACTCTGTAGTGTAATTAATTTTGTTCAAATTAA  743

seq1  TTATTTAAGTTATATTTATTTATGCATACATTATCCCAGATAAGTATGGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAGTTATATTTATTTATGCATACATTATCCCAGATAAGTATGGG  793

seq1  TGGCTTATTTGGGTAAGCGAAATTTAATCCAATATAATATATTCTGAACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTATTTGGGTAAGCGAAATTTAATCCAATATAATATATTCTGAACA  843

seq1  GCCACCGAGTTTCCAATATTTTTTAAACTAATTTGCCGAAGACTCTAATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCGAGTTTCCAATATTTTTTAAACTAATTTGCCGAAGACTCTAATT  893

seq1  TTATGTTCAGGTGAAGTAATTACAAAACTTTCACAAAGTTTTCTAATATC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTCAGGTGAAGTAATTACAAAACTTTCACAAAGTTTTCTAATATC  943

seq1  TCAGTCTCTACATCAAATAGTCTTAACTCTTTTCTCCAGTCCCTTGGTGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTCTACATCAAATAGTCTTAACTCTTTTCTCCAGTCCCTTGGTGA  993

seq1  GGGGGATAAATTGCAAACACTAGGAATGAGTGTTAGGGATAACAGGGACT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGATAAATTGCAAACACTAGGAATGAGTGTTAGGGATAACAGGGACT  1043

seq1  GTGCCTGGAGGGCAAGCGGGAAGGGCATTGAAGCTCTGGGCTGAGTTTGA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGGAGGGCAAGCGGGAAGGGCATTGAAGCTCTGGGCTGAGTTTGA  1093

seq1  GAAGACAGGCCTTACTATTGGCATCCTGTTTTAGACTGCCCTTTTACATT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGGCCTTACTATTGGCATCCTGTTTTAGACTGCCCTTTTACATT  1143

seq1  GAGAGAACTTACAATGATGCTGTAGAATTC  1177
      ||||||||||||||||||||||||||||||
seq2  GAGAGAACTTACAATGATGCTGTAGAATTC  1173