MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-126I21
Chromosome	9 (Build37)
Map Location	5,789,460 - 5,972,912
singlet/doublet	doublet
Overlap gene	LOC547033, LOC100039361, LOC100039372
Upstream gene	Gria4, EG664889, Casp1, Casp4, Casp12
Downstream gene	LOC664957, LOC676037, Pdgfd, Ddi1, EG664919, LOC100039400, LOC100039418, EG547034, Dync2h1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Gria4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14802 MGI:95811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG664889 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664889 MGI:3645154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 141 ESTs, 7 Proteins pseudo : _no_value

name	Casp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12362 MGI:96544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Casp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12363 MGI:107700
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Casp12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12364 MGI:1312922
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC547033 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:547033
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	LOC100039361 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039361
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	LOC100039372 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039372
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	LOC664957 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:664957
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC676037 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:676037
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Pdgfd (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71785 MGI:1919035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ddi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71829 MGI:1919079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 8 Proteins

name	EG664919 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:664919 MGI:3644302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	LOC100039400 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039400
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins pseudo : _no_value

name	LOC100039418 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039418
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs

name	EG547034 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:547034 MGI:3643789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs

name	Dync2h1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110350 MGI:107736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gria4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130535 GeneID:14802 MGI:95811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, ionotropic, AMPA4 (alpha 4) transcript_id : NM_019691.3

name	Casp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198304 GeneID:12362 MGI:96544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 1 transcript_id : NM_009807.2

name	Casp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6671681 GeneID:12363 MGI:107700
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 4, apoptosis-related cysteine peptidase transcript_id : NM_007609.1

name	Casp12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142367382 GeneID:12364 MGI:1312922
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caspase 12 transcript_id : NM_009808.3

name	LOC100039361 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259437 GeneID:100039361
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to Mnn4p transcript_id : XM_001472754.1

name	Pdgfd (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802185 GeneID:71785 MGI:1919035
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : platelet-derived growth factor, D polypeptide transcript_id : NM_027924.2

name	Ddi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385568 GeneID:71829 MGI:1919079
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 16 ESTs, 8 Proteins product : DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae) transcript_id : XM_885770.2

name	EG664919 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94385569 GeneID:664919 MGI:3644302
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : predicted gene, EG664919 transcript_id : XM_973693.1

name	LOC100039418 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149259439 GeneID:100039418
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 7 ESTs product : similar to pol protein transcript_id : XM_001472846.1

name	EG547034 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149259441 GeneID:547034 MGI:3643789
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 6 ESTs product : predicted gene, EG547034 transcript_id : XM_886250.3

name	Dync2h1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:72534791 GeneID:110350 MGI:107736
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dynein cytoplasmic 2 heavy chain 1 transcript_id : NM_029851.2

name	Gria4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40254542 CCDS:CCDS22797.1 GeneID:14802 MGI:95811
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0045211 - postsynaptic membrane [Evidence IEA] GO_function : GO:0005234 - glutamate-gated ion channel activity [Evidence IEA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0004970 - ionotropic glutamate receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : glutamate receptor channel alpha 4; glutamate receptor C; AMPA-selective glutamate receptor 4 (GluR-4) flip product : glutamate receptor, ionotropic, AMPA4 (alpha 4) protein_id : NP_062665.2

name	Casp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198305 CCDS:CCDS22798.1 GeneID:12362 MGI:96544
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005576 - extracellular region [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0030693 - caspase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008219 - cell death [Evidence IDA]; GO:0006917 - induction of apoptosis [Evidence IDA] [Evidence IMP] [Evidence IEA]; GO:0016485 - protein processing [Evidence IDA] [Evidence IMP]; GO:0006508 - proteolysis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0001666 - response to hypoxia [Evidence IMP] codon_start : 1 note : IL-1B converting enzyme; interleukin 1 beta-converting enzyme product : caspase 1 protein_id : NP_033937.2

name	Casp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6671682 CCDS:CCDS22799.1 GeneID:12363 MGI:107700
definition	GO_component : GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : caspase 4, apoptosis-related cysteine protease; caspase 11, apoptosis-related cysteine protease; caspase 11, apoptosis-related cysteine peptidase product : caspase 11 protein_id : NP_031635.1

name	Casp12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981868 CCDS:CCDS22800.1 GeneID:12364 MGI:1312922
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence TAS]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence IEA]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0030968 - unfolded protein response [Evidence IDA]; GO:0006926 - virus-infected cell apoptosis [Evidence IDA] codon_start : 1 exception : mismatches in translation product : caspase 12 protein_id : NP_033938.2

name	LOC100039361 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259438 GeneID:100039361
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472804.1

name	Pdgfd (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229137 CCDS:CCDS22801.1 GeneID:71785 MGI:1919035
definition	GO_component : GO:0005615 - extracellular space [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008083 - growth factor activity [Evidence IEA]; GO:0005161 - platelet-derived growth factor receptor binding [Evidence ISS]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0008283 - cell proliferation [Evidence IEA]; GO:0050875 - cellular physiological process [Evidence ISS]; GO:0050730 - regulation of peptidyl-tyrosine phosphorylation [Evidence IDA]; GO:0000074 - regulation of progression through cell cycle [Evidence IEA] codon_start : 1 product : platelet-derived growth factor, D polypeptide protein_id : NP_082200.1

name	Ddi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82919834 GeneID:71829 MGI:1919079
definition	codon_start : 1 product : DDI1, DNA-damage inducible 1, homolog 1 protein_id : XP_890863.1

name	EG664919 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94385570 GeneID:664919 MGI:3644302
definition	codon_start : 1 product : hypothetical protein protein_id : XP_978787.1

name	LOC100039418 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149259440 GeneID:100039418
definition	codon_start : 1 product : similar to pol protein protein_id : XP_001472896.1

name	EG547034 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149259442 GeneID:547034 MGI:3643789
definition	codon_start : 1 product : similar to 5-methyltetrahydrofolate-homocysteine methyltransferase protein_id : XP_891343.3

name	Dync2h1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:72534792 GeneID:110350 MGI:107736
definition	GO_component : GO:0005868 - cytoplasmic dynein complex [Evidence IEA]; GO:0030286 - dynein complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042624 - ATPase activity, uncoupled [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0008105 - asymmetric protein localization [Evidence IMP]; GO:0042384 - cilium biogenesis [Evidence IMP]; GO:0007368 - determination of left/right symmetry [Evidence IMP]; GO:0009953 - dorsal/ventral pattern formation [Evidence IMP]; GO:0030326 - embryonic limb morphogenesis [Evidence IMP]; GO:0030900 - forebrain development [Evidence IMP]; GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0016485 - protein processing [Evidence IMP] codon_start : 1 note : dynein heavy chain 2; cytoplasmic dynein heavy chain 2 product : dynein, cytoplasmic, heavy chain 2 protein_id : NP_084127.2

name	LOC547033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547033
definition	number : 1 pseudo : _no_value

name	LOC547033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547033
definition	number : 2 pseudo : _no_value

name	LOC547033 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:547033
definition	number : 3 pseudo : _no_value

name	LOC100039372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039372
definition	number : 2 pseudo : _no_value

name	LOC100039372 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039372
definition	number : 1 pseudo : _no_value

name	LOC664957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664957
definition	number : 1 pseudo : _no_value

name	LOC664957 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:664957
definition	number : 2 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 1 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 2 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 3 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 4 pseudo : _no_value

name	LOC676037 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:676037
definition	number : 5 pseudo : _no_value

name	LOC100039400 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100039400
definition	number : 1 pseudo : _no_value

name	EG664889 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94385567 GeneID:664889 MGI:3645154
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 141 ESTs, 7 Proteins product : predicted gene, EG664889 pseudo : _no_value transcript_id : XR_001661.1

clone name	MSMg01-495N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109P16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-407J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291P20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129D01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-197B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338O02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-120H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-383O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-524G17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373O17
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-397C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136D19
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-137K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-114C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411D13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-380D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-406J20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462N16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-152B18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-062N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374N03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-508I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-205H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-174H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336G11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-463I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517H10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-053C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-313P09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458P07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420F07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336H13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-518K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-158M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-116B08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348L14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059B23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-001C17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314D05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013J14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-308C04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-228H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080F21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-132P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-073J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-201K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126I21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-040B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-200F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049E12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075E16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081A14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-124M21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-130I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010G07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061F24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142E06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-278L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-056J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-080P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-145F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134J05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129P03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117F15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289F05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166N20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-100F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-253G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-075N10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-126I21.b	B6Ng01-126I21.g
ACC	DH928896	DH928897
length	1,179	1,126
definition	DH928896\|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I21, 5' end.	DH928897\|Mus musculus domesticus DNA, BAC clone: B6Ng01-126I21, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(5,971,724 - 5,972,912)	(5,789,460 - 5,790,602)
sequence	gaattctctcaactgttttttgcatagtgtcctttcattaagattttatt tttgatgatttccttctcccgatcaatgctgtcagctcttgtttgtaaac tctttgagtaatcagatcacatctatttattatgccaataaatctcttac tactccaacaaatatttaattatgctgctgattcatctgccttgtttctc ctaatcaagttgagaatattctaacatgtcctctccttttgaacatactt taattcaaaatgaaggaaagagcatctctggtccaattaggttgtccaaa cacaacccctgagcttaatttttatatgaacactgaactggcatttggcc atttcattctttgcttggctacttctgccacgtatgatttcaagatgaca attccctttggacttttggctgaaggcacatgtcatttccaattcattac tttcttaatatttgctagctgcagagcatctgtccccatgcaagcagctt tggataataatgtacacctctgtaaaagtaagataattgtgatgcatgac taagggaaataaaacacaggaatgtaattttccaaatttgagaatctttc tgtgccatatcttatatatggtgatgtttgcatttttagtatgcttgtgg catatctttgtggagaaacatcattcaaggaaagcatttgctttgtggat gttttattgaatgtttcatgcctggtcatgtgatctgactgaaaatgatg tcactaaacaaggaatagtgtattttttcaccacacatactagaagtctt actgagggaagttaaaaagagcaaataatggcatatgccatttatttgct ttttattcatttcatgacttggtaaatttgttgcacattcattattaaaa aaaggcattcaaaactttgaacacttctttctagcagtcattcattaaat tctcacaatccagaagtcataagagttatgaatcagctaaaggcacatct caagacattaaagagtaattgcattatgtatggggttcagattgtagctt gctatggtggggagcaccagtgcacagaatcaccaatccttcaacacttt ggttactgagaactactaggggatgagcttctaggatatctatgaaggcg agacagaagcaatggactggagatcccaa	gaattctttaatttttttgtatctttttaacaagaagggtgcattataat aaggatagattatatgacaaaatagtctgtataataaaaagaagagaatg aacaaaggacagaaatattcctttgttttactgggatgggagctatttgt tcctaatttttatcttctccatttgctttaagtattttatcctgttttgt tccttttttggttatcaaacccaatcttattattgttattttatatgaca ctattagatatttagttaggcaacttttactattagagtattttactttt aaacaatattttaccacatttcaacaggctttgttgacctatcagtgctc tctaaattagtatgcctcacattgcagaaactgtgacagcctcaggatgt actactcttctttaacagcttcattcctcctgtacggccttctcagattt taattacagaatcactttaaattagtaatataatgcatttagaatgtaca aaaaaataaagtgggtggttcataatcataactgtatagtcctagcacac agttagaccacttgcagattctcttggtggtgcccacatagtctttagtg gaggaatgatatctgcttactgtatcctcacaggatagaaggtgctgatg agctctgactttttaaatgagtaccaatctaagtcataaagcctttgttc ttaccagataataaccctttcacctccttttcactcaaaattgtacatat tctattcaggtatttgaagatatcatgcaaatatgttttctgtcatttct tcaataatccgcataatgttttaaatgttttttaaagtaatatttcactc ttccatttcatgaattcttgtattttctctgtcattggttttgggaacat tgatttttatgatttcgccattttaaaatctatcagttccaaaacaatgg ttaacagatcatgcagccattctgggtttggaattgtatttatttttttt gtaaaaaaaaaacccaccctcttattttacacagatagtatacacatgaa gtcaaaggatagctgctaaattgaaccctagtttcatgttgtgggcagca ttttttgccctgaacagatatgttac
quality values	Open. Hide. 61 47 41 38 61 61 61 61 61 49 34 61 61 61 61 61 61 61 59 61 61 59 59 45 61 13 13 15 21 11 12 18 21 18 44 44 36 59 59 59 59 59 61 61 61 61 61 61 61 61 59 59 59 59 59 59 61 61 59 61 61 61 61 61 61 61 61 59 59 59 41 37 44 41 30 43 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 59 59 59 59 61 61 61 61 61 59 61 59 59 59 61 61 61 59 61 61 59 59 59 61 61 59 55 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 61 61 53 61 61 61 61 61 43 61 61 61 61 61 61 61 61 61 61 37 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 38 61 61 47 61 47 57 57 43 57 53 50 57 57 57 57 57 53 51 53 57 53 47 53 57 57 53 57 53 47 57 50 53 53 57 57 57 42 32 57 53 43 57 53 57 57 57 53 52 57 57 57 57 53 53 57 47 53 52 57 52 53 53 57 53 57 47 45 47 48 53 53 53 53 57 57 53 53 52 52 57 42 57 57 50 45 45 53 48 38 53 53 37 21 52 47 46 37 47 46 42 37 44 46 53 57 53 50 53 57 52 53 38 57 57 47 25 53 36 57 57 29 50 42 57 50 36 41 43 53 33 57 37 50 42 35 37 34 57 42 57 57 37 44 40 50 53 36 52 37 34 38 53 53 38 38 33 35 32 57 57 41 34 53 47 27 53 40 36 37 52 22 9 57 52 34 27 52 40 57 32 31 33 43 35 24 52 27 36 30 57 57 57 57 52 40 27 25 14 16 41 31 40 24 37 28 46 33 37 20 44 41 34 40 47 36 40 34 36 34 43 40 14 57 53 35 57 27 26 20 25 57 51 46 45 29 47 21 31 38 51 31 32 16 51 27 51 24 27 29 39 29 29 38 35 30 32 34 51 43 30 44 46 34 12 20 29 51 51 46 16 30 39 35 27 15 31 51 38 37 23 38 35 29 28 23 33 30 46 26 29 51 29 38 46 27 20 14 34 19 29 17 29 18 46 19 26 14 9 12 28 14 51 27 51 51 46 46 46 32 33 32 24 18 29 29 29 13 51 46 17 18 27 51 23 24 33 7 10 15 26 21 26 28 19 51 29 23 25 29 20 28 24 31 28 28 20 33 24 29 25 39 34 29 51 29 29 19 26 28 25 21 31 23 22 26 29 18 28 15 38 38 21 27 31 14 21 21 31 13 36 9 29 16 31 28 20 31 29 25 31 29 14 27 35 30 44 14 33 27 10 7 9 6 10 21 21 18 19 27 11 6 10 10 28 8 9 5 5 6 20 6 12 17 30 10 21 28 7 5 18 23 27 19 30 17 30 7 28 44 44 31 9 16 17 18 12 33 13 8 16 12 30 9 22 15 14 13 16 14 17 8 17 10 5 7 5 6 13 34 13 24 29 7 12 9 3 4 8 20 8 20 11 11 31 20 8 16 18 17 22 7 7 6 6 4 4 5 5 11 6 12 9 11 24 42 27 5 11 4 8 5 13 7 6 5 5 11 9 11 4 1 4 4 3 4 21 26 9 7 4 6 21 9 16 14 7 4 5 12 16 5 18 4 4 5 10 6 11 9 5 18 5 18 10 7 2 5 4 7 6 3 3 9 3 4 18 7 4 6 7 4 1 4 3 7 10 5 3 7 3 4 7 7 18 17	Open. Hide. 61 47 55 49 61 43 26 25 15 18 18 35 59 59 55 55 61 61 59 61 61 61 61 61 59 61 61 59 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 37 44 34 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 52 55 55 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 50 61 61 39 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 53 61 61 61 61 61 50 61 53 53 57 57 57 53 53 53 53 52 57 57 57 57 57 57 53 53 38 57 57 52 57 53 57 57 42 43 57 47 38 57 43 57 53 50 57 53 53 53 53 45 57 53 57 53 53 52 53 57 43 53 28 47 47 42 32 57 53 45 50 52 57 53 57 57 47 53 45 53 52 57 38 52 45 57 57 53 52 33 53 50 38 57 34 32 57 38 57 47 32 46 16 53 45 53 53 50 35 50 57 38 53 53 53 50 53 47 45 36 57 57 57 53 45 57 45 50 53 53 35 53 36 43 53 37 42 50 53 33 13 25 37 45 37 30 36 42 57 41 38 37 46 33 57 53 37 27 40 50 31 50 30 40 50 40 37 42 21 42 52 42 52 50 35 57 42 37 57 31 35 35 52 34 37 39 40 33 57 57 40 39 32 40 35 40 14 57 57 29 17 37 48 25 36 42 30 47 37 40 40 41 37 34 35 44 40 22 15 30 28 37 29 57 40 34 36 39 28 40 20 29 32 37 33 41 47 30 35 51 47 35 35 30 41 24 46 46 30 40 28 37 29 30 24 32 51 28 38 21 29 32 18 30 30 32 38 29 29 39 22 29 29 28 30 29 23 39 15 51 51 29 41 47 32 28 33 25 51 51 51 51 48 24 51 29 21 23 34 29 24 29 29 51 29 35 28 33 34 43 31 29 31 29 23 34 51 43 34 20 28 35 28 34 21 23 41 22 27 24 8 28 22 51 51 46 36 26 29 27 46 23 29 18 21 26 31 31 29 51 51 46 20 51 9 41 17 25 19 20 21 23 9 6 51 51 51 29 27 21 14 20 30 51 40 29 12 12 40 15 29 51 51 23 28 51 51 38 15 19 20 31 29 20 18 31 38 26 31 32 22 51 51 16 27 17 28 18 24 27 14 12 30 6 9 6 12 15 12 7 7 22 29 23 21 17 23 16 8 27 31 18 10 12 25 20 12 42 29 26 33 11 17 5 12 6 7 13 12 22 20 13 29 16 8 14 13 6 4 4 4 4 10 30 42 30 36 6 33 26 33 16 16 31 12 5 4 6 4 3 4 8 14 11 21 37 33 7 5 17 9 10 3 5 17 4 4 8 5 8 5 6 14 8 23 11 10 20 3 4 17 4 4 4 7 5 7 14 6 4 3 5 11 26 26 5 2 4 22 18 11 5 9 16 22 15 14 5 4 5 5 7 7 4 8 5 7 9 17 10 22 6 21 25 24 4 4 4 16 10 17 27 29 29 27 19 10 19 20 9 17 10 6 9 4 4 3 4 6 3 3 9 9 20 7 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr9_5971724_5972912
seq2: B6Ng01-126I21.b_49_1227 (reverse)

seq1  TTGGAATCTCCAGGCCA-TGCTTCTGCTCTGCCCTTCATAGATATCCTAG  49
      |||| |||||||| ||| |||||||| |||  ||||||||||||||||||
seq2  TTGGGATCTCCAGTCCATTGCTTCTG-TCTCGCCTTCATAGATATCCTAG  49

seq1  AAGCTCATCCCCTTATGTAG-TCTCAGTAAACAAAAGTGTTGAGAGATTG  98
      |||||||||||||   |||| ||||||| ||| ||||||||||  |||||
seq2  AAGCTCATCCCCT--AGTAGTTCTCAGT-AACCAAAGTGTTGAAGGATTG  96

seq1  GTGATTCTGTGCAACTGTTGCT-CACACCATAGCAAGCTACAATCTGAAC  147
      |||||||||||| |||| |||| | |||||||||||||||||||||||||
seq2  GTGATTCTGTGC-ACTGGTGCTCCCCACCATAGCAAGCTACAATCTGAAC  145

seq1  CCCATTACATAATGCAATTACTCTGTTAATGTCTTGAGATTGTGCCTTTA  197
      |||| ||||||||||||||||||| |||||||||||||| ||||||||||
seq2  CCCA-TACATAATGCAATTACTCT-TTAATGTCTTGAGA-TGTGCCTTTA  192

seq1  GCTGATTCATAACTCTTATGACTTCTGGATTGTGAGAATTTAATGAATGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATTCATAACTCTTATGACTTCTGGATTGTGAGAATTTAATGAATGA  242

seq1  CTGCTAGAAAGAAGTGTTCAAAGTTTTGAATGCCTTTTTTTAAATAATGA  297
      ||||||||||||||||||||||||||||||||||||||||| ||||||| 
seq2  CTGCTAGAAAGAAGTGTTCAAAGTTTTGAATGCCTTTTTTT-AATAATG-  290

seq1  AATGTGCAAACAAAATTTACCAAGTCATGAAATGAATAAAAAGCAAAATA  347
      |||||||||   |||||||||||||||||||||||||||||||| |||||
seq2  AATGTGCAA--CAAATTTACCAAGTCATGAAATGAATAAAAAGC-AAATA  337

seq1  AATGGCATATGCCATTATTTGCTCTTTTTAACTTCCCTCAGTAAGACTTC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCATATGCCATTATTTGCTCTTTTTAACTTCCCTCAGTAAGACTTC  387

seq1  TAGTATGTGTGGTGAAAAAATACACTATTCCTTGTTTAGTGACATCATTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATGTGTGGTGAAAAAATACACTATTCCTTGTTTAGTGACATCATTT  437

seq1  TCAGTCAGATCACATGACCAGGCATGAAACATTCAATAAAACATCCACAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCAGATCACATGACCAGGCATGAAACATTCAATAAAACATCCACAA  487

seq1  AGCAAATGCTTTCCTTGAATGATGTTTCTCCACAAAGATATGCCACAAGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATGCTTTCCTTGAATGATGTTTCTCCACAAAGATATGCCACAAGC  537

seq1  ATACTAAAAATGCAAACATCACCATATATAAGATATGGCACAGAAAGATT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAAAATGCAAACATCACCATATATAAGATATGGCACAGAAAGATT  587

seq1  CTCAAATTTGGAAAATTACATTCCTGTGTTTTATTTCCCTTAGTCATGCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATTTGGAAAATTACATTCCTGTGTTTTATTTCCCTTAGTCATGCA  637

seq1  TCACAATTATCTTACTTTTACAGAGGTGTACATTATTATCCAAAGCTGCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATTATCTTACTTTTACAGAGGTGTACATTATTATCCAAAGCTGCT  687

seq1  TGCATGGGGACAGATGCTCTGCAGCTAGCAAATATTAAGAAAGTAATGAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGGGACAGATGCTCTGCAGCTAGCAAATATTAAGAAAGTAATGAA  737

seq1  TTGGAAATGACATGTGCCTTCAGCCAAAAGTCCAAAGGGAATTGTCATCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAATGACATGTGCCTTCAGCCAAAAGTCCAAAGGGAATTGTCATCT  787

seq1  TGAAATCATACGTGGCAGAAGTAGCCAAGCAAAGAATGAAATGGCCAAAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCATACGTGGCAGAAGTAGCCAAGCAAAGAATGAAATGGCCAAAT  837

seq1  GCCAGTTCAGTGTTCATATAAAAATTAAGCTCAGGGGTTGTGTTTGGACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTCAGTGTTCATATAAAAATTAAGCTCAGGGGTTGTGTTTGGACA  887

seq1  ACCTAATTGGACCAGAGATGCTCTTTCCTTCATTTTGAATTAAAGTATGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATTGGACCAGAGATGCTCTTTCCTTCATTTTGAATTAAAGTATGT  937

seq1  TCAAAAGGAGAGGACATGTTAGAATATTCTCAACTTGATTAGGAGAAACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGGAGAGGACATGTTAGAATATTCTCAACTTGATTAGGAGAAACA  987

seq1  AGGCAGATGAATCAGCAGCATAATTAAATATTTGTTGGAGTAGTAAGAGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGATGAATCAGCAGCATAATTAAATATTTGTTGGAGTAGTAAGAGA  1037

seq1  TTTATTGGCATAATAAATAGATGTGATCTGATTACTCAAAGAGTTTACAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGGCATAATAAATAGATGTGATCTGATTACTCAAAGAGTTTACAA  1087

seq1  ACAAGAGCTGACAGCATTGATCGGGAGAAGGAAATCATCAAAAATAAAAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGCTGACAGCATTGATCGGGAGAAGGAAATCATCAAAAATAAAAT  1137

seq1  CTTAATGAAAGGACACTATGCAAAAAACAGTTGAGAGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGAAAGGACACTATGCAAAAAACAGTTGAGAGAATTC  1179

seq1: chr9_5789460_5790602
seq2: B6Ng01-126I21.g_67_1192

seq1  GAATTCTTTAATTTTTTTGTATCTTTTTAACAAGAAGGGTGCATTATAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAATTTTTTTGTATCTTTTTAACAAGAAGGGTGCATTATAAT  50

seq1  AAGGATAGATTATATGACAAAATAGTCTGTATAATAAAAAGAAGAGAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATAGATTATATGACAAAATAGTCTGTATAATAAAAAGAAGAGAATG  100

seq1  AACAAAGGACAGAAATATTCCTTTGTTTTACTGGGATGGGAGCTATTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGGACAGAAATATTCCTTTGTTTTACTGGGATGGGAGCTATTTGT  150

seq1  TCCTAATTTTTATCTTCTCCATTTGCTTTAAGTATTTTATCCTGTTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATTTTTATCTTCTCCATTTGCTTTAAGTATTTTATCCTGTTTTGT  200

seq1  TCCTTTTTTGGTTATCAAACCCAATCTTATTATTGTTATTTTATATGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTTTGGTTATCAAACCCAATCTTATTATTGTTATTTTATATGACA  250

seq1  CTATTAGATATTTAGTTAGGCAACTTTTACTATTAGAGTATTTTACTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTAGATATTTAGTTAGGCAACTTTTACTATTAGAGTATTTTACTTTT  300

seq1  AAACAATATTTTACCACATTTCAACAGGCTTTGTTGACCTATCAGTGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATATTTTACCACATTTCAACAGGCTTTGTTGACCTATCAGTGCTC  350

seq1  TCTAAATTAGTATGCCTCACATTGCAGAAACTGTGACAGCCTCAGGATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTAGTATGCCTCACATTGCAGAAACTGTGACAGCCTCAGGATGT  400

seq1  ACTACTCTTCTTTAACAGCTTCATTCCTCCTGTACGGCCTTCTCAGATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTCTTCTTTAACAGCTTCATTCCTCCTGTACGGCCTTCTCAGATTT  450

seq1  TAATTACAGAATCACTTTAAATTAGTAATATAATGCATTTAGAATGTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACAGAATCACTTTAAATTAGTAATATAATGCATTTAGAATGTACA  500

seq1  AAAAAATAAAGTGGGTGGTTCATAATCATAACTGTATAGTCCTAGCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAAAGTGGGTGGTTCATAATCATAACTGTATAGTCCTAGCACAC  550

seq1  AGTTAGACCACTTGCAGATTCTCTTGGTGGTGCCCACATAGTCTTTAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGACCACTTGCAGATTCTCTTGGTGGTGCCCACATAGTCTTTAGTG  600

seq1  GAGGAATGATATCTGCTTACTGTATCCTCACAGGATAGAAGGTGCTGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAATGATATCTGCTTACTGTATCCTCACAGGATAGAAGGTGCTGATG  650

seq1  AGCTCTGACTTTTTAAATGAGTACCAATCTAAGTCATAAAGCCTTTGTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGACTTTTTAAATGAGTACCAATCTAAGTCATAAAGCCTTTGTTC  700

seq1  TTACCAGATAATAACCCTTTCACCTCCTTTTCACTCAAAATTGTACATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCAGATAATAACCCTTTCACCTCCTTTTCACTCAAAATTGTACATAT  750

seq1  TCTATTCAGGTATTTGAAGATATCATGCAAATATGTTTTCTGTCATTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTCAGGTATTTGAAGATATCATGCAAATATGTTTTCTGTCATTTCT  800

seq1  TCAATAATCCGCATAATGTTTTAAATGTTTTTTTAAAGTAATATTTCACT  850
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCAATAATCCGCATAATGTTTTAAATG-TTTTTTAAAGTAATATTTCACT  849

seq1  CTTCCATTTCATGAATTCTTGTATTTTTCTCTGTCATTGGTTTTTGGAAC  900
      ||||||||||||||||||||||| |||||||||||||||||||| |||||
seq2  CTTCCATTTCATGAATTCTTGTA-TTTTCTCTGTCATTGGTTTTGGGAAC  898

seq1  ATTGATTTTTATGATTTTCGCCATTTTAAAATCTATCAGTTCCAAAACAA  950
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ATTGATTTTTATGA-TTTCGCCATTTTAAAATCTATCAGTTCCAAAACAA  947

seq1  TGGTTAACAGATCATGCAGCCATTCTGGGTTTGGAATTTGTATTTATTTT  1000
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGGTTAACAGATCATGCAGCCATTCTGGGTTTGGAA-TTGTATTTATTTT  996

seq1  TATGTAAAAAAAAAAACCCACACCTGTTTATTTTACACAGAATAGTATAC  1050
      | |   ||||||||||||||| |||  ||||||||||||| |||||||||
seq2  TTTTGTAAAAAAAAAACCCAC-CCT-CTTATTTTACACAG-ATAGTATAC  1043

seq1  ACATGGAGGTCAGAGGATAGCTTGCTAAAATTGAACCTCAAGTTCTCATG  1100
      |||| || |||| |||||||| |||| |||||||||| | |||| |||||
seq2  ACAT-GAAGTCAAAGGATAGC-TGCT-AAATTGAACC-CTAGTT-TCATG  1088

seq1  TTGGTGGCAAGCATTTTTTTGCCCTTGAACAGATTCATGTTAC  1143
      || ||||  |||| |||||||||| |||||||||  |||||||
seq2  TT-GTGGGCAGCA-TTTTTTGCCC-TGAACAGAT--ATGTTAC  1126

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BAC

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Alignment Information