BAC Information

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BAC

Clone NameB6Ng01-126L14
Chromosome9 (Build37)
Map Location 112,130,548 - 112,131,606
singlet/doubletsinglet
Overlap geneLOC100039341
Upstream geneMlh1, Epm2aip1, Lba1, Dclk3, LOC620615, Stac, 4930545L08Rik, Arpp21
Downstream geneLOC620760, LOC100043800, EG622110, LOC100039391, LOC100043801
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126L14.bB6Ng01-126L14.g
ACCDH929018DH929019
length1,2721,048
definitionDH929018|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L14, 5' end.DH929019|Mus musculus domesticus DNA, BAC clone: B6Ng01-126L14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggatgattgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcagctgaagtcaccttttggtgagcatt
tacatgggacacaaatatcttcacatcctttgcccatttggagagatcta
tccacatacttcttccccagatgtctttctcaccaattttccaattgtga
tctttccaagtccctgaccatccagccaatccattggctacagcccatga
gtcagtgtataatcgtacatctggccatttcttcttgcaaacaaactgta
ataccatgtgtactgcccgaagttctgcccactgtgaagatttcccttca
cctgtgtctttcaaggttgtcccagaaaggggttgtaatgctgcagctgt
ccacttctgggtggtgcctgcataacgtgcagagccatcagtaaaccagg
ctctagtcttctcctcttcggtcagttgatcatagggaacaccccatgag
gctatagtgcatgcttggcagcagatggcattgtaacaggagtagaaacc
ataggcatttgagcacttcttcatgtaacttgcttgtgctcagactgctc
tggccgatcacgtatataccacttccatttgataatagaactgctgctgt
gcacgttcccactttatgactggcagtctgaaagtacccaggctcataga
ggggtaggtcaaggtcgccatggacctggtgtccctattgccaaggcgtt
cagagtccataaggaccatgcaggcaagacctgtttttccaaagggagat
aatagtgtctgcctgcacgtaa
gaattcctactgaaattacacttcacgacaaacaagacacaagccaagaa
cgccactcactgtgttttcccacaaataagtgctataatgtcctgtgaga
attttgtctgtgcttttagagacatgggaatcatttgacagtatttaatt
ttccagttgtgctccttatatacaaataaaaaaaattaaaggatcaagac
taacctttgggtgccaatgagttaacctgttccttctttaaatccagtgg
tctatatctagaattttctagagttttctaagttgctgtaacattgagga
agtcctctgaaggcacattgaaatgctgagtgtgtggatggtttctggac
cacctaatgtactattgaaaagataatttatttaaactgggagaaagaaa
accttttataaattaaatgttccatgttgtactttaaagacatggggata
ttttagcctgcatatgttgattccaaccacagtgttctaaattaccatta
aatttatttacgttttgtttatgagtgtttgcccatatgtatgcatgtcc
accatgcgtgtcattggatggttgtgagccaccaggtggctactgggaag
agatctcagattctctgcaagaacagcaagtgctcttagccagtgagcca
tctctccagcccctcccttatggcgattctttatgccaaataaatcaaaa
tgccaggatgaatgaatttattttccctttcactggaagatcttatatgc
tgggttgttctagggtgagggttgttacctaggcaatatgaagggacctt
gctaagtaacagaaacccaccttccttgtttgtcttatgatttctgcatc
tatcccctgtatttagtgtataataaacaagccaccagtgacctggaaga
aaagattgcagattattagaattccagcactacttgatgaagcaggcatg
aggaagaatcatccagactcattagtaaatagctttgtgactcgatccta
ggaatagctattaagagatgattgatacttccggtagattagtgtttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_112130548_112131606
seq2: B6Ng01-126L14.g_68_1115

seq1  GAATTCCTACTGAAATTACACTTCACGACAAACAAGACACAAGCCAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTGAAATTACACTTCACGACAAACAAGACACAAGCCAAGAA  50

seq1  CGCCACTCACTGTGTTTTCCCACAAATAAGTGCTATAATGTCCTGTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCACTCACTGTGTTTTCCCACAAATAAGTGCTATAATGTCCTGTGAGA  100

seq1  ATTTTGTCTGTGCTTTTAGAGACATGGGAATCATTTGACAGTATTTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTCTGTGCTTTTAGAGACATGGGAATCATTTGACAGTATTTAATT  150

seq1  TTCCAGTTGTGCTCCTTATATACAAATAAAAAAAATTAAAGGATCAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGTTGTGCTCCTTATATACAAATAAAAAAAATTAAAGGATCAAGAC  200

seq1  TAACCTTTGGGTGCCAATGAGTTAACCTGTTCCTTCTTTAAATCCAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTTGGGTGCCAATGAGTTAACCTGTTCCTTCTTTAAATCCAGTGG  250

seq1  TCTATATCTAGAATTTTCTAGAGTTTTCTAAGTTGCTGTAACATTGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATCTAGAATTTTCTAGAGTTTTCTAAGTTGCTGTAACATTGAGGA  300

seq1  AGTCCTCTGAAGGCACATTGAAATGCTGAGTGTGTGGATGGTTTCTGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCTGAAGGCACATTGAAATGCTGAGTGTGTGGATGGTTTCTGGAC  350

seq1  CACCTAATGTACTATTGAAAAGATAATTTATTTAAACTGGGAGAAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTAATGTACTATTGAAAAGATAATTTATTTAAACTGGGAGAAAGAAA  400

seq1  ACCTTTTATAAATTAAATGTTCCATGTTGTACTTTAAAGACATGGGGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTATAAATTAAATGTTCCATGTTGTACTTTAAAGACATGGGGATA  450

seq1  TTTTAGCCTGCATATGTTGATTCCAACCACAGTGTTCTAAATTACCATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGCCTGCATATGTTGATTCCAACCACAGTGTTCTAAATTACCATTA  500

seq1  AATTTATTTACGTTTTGTTTATGAGTGTTTGCCCATATGTATGCATGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATTTACGTTTTGTTTATGAGTGTTTGCCCATATGTATGCATGTCC  550

seq1  ACCATGCGTGTCATTGGATGGTTGTGAGCCACCAGGTGGCTACTGGGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGCGTGTCATTGGATGGTTGTGAGCCACCAGGTGGCTACTGGGAAG  600

seq1  AGATCTCAGATTCTCTGCAAGAACAGCAAGTGCTCTTAGCCAGTGAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCAGATTCTCTGCAAGAACAGCAAGTGCTCTTAGCCAGTGAGCCA  650

seq1  TCTCTCCAGCCCCTCCCTTATGGCGATTCTTTATGCCAAATAAATCAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAGCCCCTCCCTTATGGCGATTCTTTATGCCAAATAAATCAAAA  700

seq1  TGCCAGGATGAATGAATTTATTTTCCCTTTCACTGGAAGATCTTATATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGGATGAATGAATTTATTTTCCCTTTCACTGGAAGATCTTATATGC  750

seq1  TGGGTTGTTCTAGGGTGAGGGTTGTTACCTAGGCAATATGAAGGGACCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGTTCTAGGGTGAGGGTTGTTACCTAGGCAATATGAAGGGACCTT  800

seq1  GCTAAGTAACAGAAACCCACCTTCCTTGTTTGTTCTATGATTTCTGCATC  850
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  GCTAAGTAACAGAAACCCACCTTCCTTGTTTGTCTTATGATTTCTGCATC  850

seq1  TATCCCCTGTATTTAGTGTATAATAAACAAGCAACCAGTGACCTGGAAGA  900
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  TATCCCCTGTATTTAGTGTATAATAAACAAGCCACCAGTGACCTGGAAGA  900

seq1  AAAGAATGCAGATTATTAGAAATTCCAGCACTAACTTGGATGAAGCAGGC  950
      ||||| ||||||||||||| |||||||||||| |||| ||||||||||||
seq2  AAAGATTGCAGATTATTAG-AATTCCAGCACT-ACTT-GATGAAGCAGGC  947

seq1  ACTGAGGAAGAAATCAATCCAGACTCATTAGGTAGATAAGCTTCGTGACT  1000
      | |||||||| |||| |||||||||||||| ||| || ||||| ||||||
seq2  A-TGAGGAAG-AATC-ATCCAGACTCATTA-GTAAAT-AGCTTTGTGACT  992

seq1  CGATCTCTAGGAAATAGCTATAAAGAGATGATTTGATACTTCC-GTAGAT  1049
      ||||| ||||| ||||||||| ||||||||| ||||||||||| ||||||
seq2  CGATC-CTAGG-AATAGCTATTAAGAGATGA-TTGATACTTCCGGTAGAT  1039

seq1  TATGTGTTTC  1059
      || |||||||
seq2  TA-GTGTTTC  1048