BAC Information

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BAC

Clone NameB6Ng01-126M22
Chromosome9 (Build37)
Map Location 34,622,146 - 34,719,932
singlet/doubletdoublet
Overlap geneKirrel3
Upstream genenone
Downstream geneSt3gal4, Dcps, Tirap, Foxred1, Srpr, C030004A17Rik, Rpusd4, EG434394, Cdon, Ddx25, Pus3, EG627480, LOC100042442, Svs7, Gm846, D730048I06Rik, 9230110F15Rik, LOC100041605, 9230113P08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126M22.bB6Ng01-126M22.g
ACCDH929082DH929083
length390675
definitionDH929082|Mus musculus domesticus DNA, BAC clone: B6Ng01-126M22, 5' end.DH929083|Mus musculus domesticus DNA, BAC clone: B6Ng01-126M22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,719,537 - 34,719,932)(34,622,146 - 34,622,820)
sequence
agtctgtgctgttgggaaagtaggcagatctctaaaggcaggctcttgga
atataataccaccttattctgtacgattctcctgagtgccctataaggcg
ctgtcaattcgaaaaagtaggaatgactcaagagaaggagggagaacatt
taaagataacagaagcagattttaatgagctgtgtaagtgggtagaagag
caaaggtagggaagaaatagagaagtaagggacacgtggtggtggggggg
ggagagaacatagcaaactaacaatactgaatcaccaccacacgctttgg
caccagctgttcttccctgtgtaaatagcaccatgaagatcgagctgagc
ctcctactctctttcctgagcagttttgtgttccttgttc
gaattctcttaatcttatgaggtgttattctcaatttgaaagaacccatg
gagaagctctctcagcctttgtgaagacaatttttaaaataaaagaaaca
aaataaacaagcccagcatgtttgagactcttgaaggaaagacagcatgt
aaatcaactaattattaacattcacaagtatttctatgcagccagaaggg
atggggagcctgattttctgtagctctctaagtagtttagggtagagtga
ttagctcattggccaatccaaatagcttcctatgagtcctcttgatggat
gcccatttgcctctcctttcaagatagaaggataaggttactccaacaac
tgtgacccatgctttcaggaagggctgtcagctggaaggaatctccatgc
tcccaagttcatggaagacaaaatagcaagtccttttgtttatgtgaaca
atgaccttctagaataatcagtatagttcatggccacatagaggatgccc
atcccaatgtcagtctccaggcagaagcaagctgatgtggtagagaagca
ggagataaaataaaggcctagaggagacaagaagaggaaactgttgacag
agagcctagaaagaaaggaaaagaaagaaagaaagaaagagagagagaga
gagagagagagggagggagggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_34719537_34719932
seq2: B6Ng01-126M22.b_49_444 (reverse)

seq1  GGACAAGGAACACAAAACTGCTCAGGAAGGAGAGTAGGAGGCTCAGCTCG  50
      | |||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAACAAGGAACACAAAACTGCTCAGGAAAGAGAGTAGGAGGCTCAGCTCG  50

seq1  ATCTTCATGGTGCTATTTACACAGGGAAGAACAGCTGGTGCCAAAGCGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCATGGTGCTATTTACACAGGGAAGAACAGCTGGTGCCAAAGCGTG  100

seq1  TGGTGGTGATTCAGTATTTTTCGTTTGCTCTGTTCTCTCCCCCCCCCACC  150
      |||||||||||||||||| || ||||||| ||||||||||||||||||||
seq2  TGGTGGTGATTCAGTATTGTTAGTTTGCTATGTTCTCTCCCCCCCCCACC  150

seq1  ACCACGTGTCCCTTACTTCTCTATTTCTTCCCTACCTTTGCTCTTCTACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACGTGTCCCTTACTTCTCTATTTCTTCCCTACCTTTGCTCTTCTACC  200

seq1  CACTTACACAGCTCATTAAAATCTGCTTCTGTTATCTTTAAATGTTCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTACACAGCTCATTAAAATCTGCTTCTGTTATCTTTAAATGTTCTCC  250

seq1  CTCCTTCTCTTGAGTCATTCCTACTTTTTCGAATTGACAGCGCCTTATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCTCTTGAGTCATTCCTACTTTTTCGAATTGACAGCGCCTTATAG  300

seq1  GGCACTCAGGAGAATCGTACAGAATAAGGTGGTATTATATTCCAAGAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTCAGGAGAATCGTACAGAATAAGGTGGTATTATATTCCAAGAGCC  350

seq1  TGCCTTTAGAGATCTGCCTACTTTCCCAACAGCACAGACTGAATTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTAGAGATCTGCCTACTTTCCCAACAGCACAGACTGAATTC  396

seq1: chr9_34622146_34622820
seq2: B6Ng01-126M22.g_68_742

seq1  GAATTCTCTTAATCTTATGAGGTGTTATTCTCAATTTGAAAGAACCCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAATCTTATGAGGTGTTATTCTCAATTTGAAAGAACCCATG  50

seq1  GAGAAGCTCTCTCAGCCTTTGTGAAGACAATTTTTAAAATAAAAGAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCTCTCTCAGCCTTTGTGAAGACAATTTTTAAAATAAAAGAAACA  100

seq1  AAATAAACAAGCCCAGCATGTTTGAGACTCTTGAAGGAAAGACAGCATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACAAGCCCAGCATGTTTGAGACTCTTGAAGGAAAGACAGCATGT  150

seq1  AAATCAACTAATTATTAACATTCACAAGTATTTCTATGCAGCCAGAAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAACTAATTATTAACATTCACAAGTATTTCTATGCAGCCAGAAGGG  200

seq1  ATGGGGAGCCTGATTTTCTGTAGCTCTCTAAGTAGTTTAGGGTAGAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGAGCCTGATTTTCTGTAGCTCTCTAAGTAGTTTAGGGTAGAGTGA  250

seq1  TTAGCTCATTGGCCAATCCAAATAGCTTCCTATGAGTCCTCTTGATGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTCATTGGCCAATCCAAATAGCTTCCTATGAGTCCTCTTGATGGAT  300

seq1  GCCCATTTGCCTCTCCTTTCAAGATAGAAGGATAAGGTTACTCCAACAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATTTGCCTCTCCTTTCAAGATAGAAGGATAAGGTTACTCCAACAAC  350

seq1  TGTGACCCATGCTTTCAGGAAGGGCTGTCAGCTGGAAGGAATCTCCATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACCCATGCTTTCAGGAAGGGCTGTCAGCTGGAAGGAATCTCCATGC  400

seq1  TCCCAAGTTCATGGAAGACAAAATAGCAAGTCCTTTTGTTTATGTGAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGTTCATGGAAGACAAAATAGCAAGTCCTTTTGTTTATGTGAACA  450

seq1  ATGACCTTCTAGAATAATCAGTATAGTTCATGGCCACATAGAGGATGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCTTCTAGAATAATCAGTATAGTTCATGGCCACATAGAGGATGCCC  500

seq1  ATCCCAATGTCAGTCTCCAGGCAGAAGCAAGCTGATGTGGTAGAGAAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAATGTCAGTCTCCAGGCAGAAGCAAGCTGATGTGGTAGAGAAGCA  550

seq1  GGAGATAAAATAAAGGCCTAGAGGAGACAAGAAGAGGAAACTGTTGACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATAAAATAAAGGCCTAGAGGAGACAAGAAGAGGAAACTGTTGACAG  600

seq1  AGAGCCTAGAAAGAAAGGAAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTAGAAAGAAAGGAAAAGAAAGAAAGAAAGAAAGAGAGAGAGAGA  650

seq1  GAGAGAGAGAGGGAGGGAGGGAGGG  675
      |||||||||||||||||||||||||
seq2  GAGAGAGAGAGGGAGGGAGGGAGGG  675