BAC Information

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BAC

Clone NameB6Ng01-126N08
Chromosome9 (Build37)
Map Location 13,735,367 - 13,868,233
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC665285, LOC100039729, LOC100039758, Maml2, Mtmr2, Cep57, 2810485I05Rik, LOC665329
Downstream geneSesn3, Endod1, LOC665351, EG547035, Jmjd2d, 0610040D20Rik, Amotl1, EG665374, Piwil4, Fut4, 1700012B09Rik, Ankrd49, Mre11a, LOC100040259, Gpr83, Folr4, Panx1, Hephl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126N08.bB6Ng01-126N08.g
ACCDH929102DH929103
length1,108904
definitionDH929102|Mus musculus domesticus DNA, BAC clone: B6Ng01-126N08, 5' end.DH929103|Mus musculus domesticus DNA, BAC clone: B6Ng01-126N08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,867,126 - 13,868,233)(13,735,367 - 13,736,267)
sequence
gaattccagcagttgcatttgttacggtttcttttaagttcagaaaacaa
aagaaagagactgttttgaaccatatccaactcacttctctggacacttc
actgtctctttaaaaaaagttcatctggctcttaaaggcagagaaaggta
agtgccccacagtccatgtgttccttcctccaactcgatcctgagaaaag
tccacaacctacaaaggaaggctggaaagagagaaaaccatggcgaattc
caaatgacctgaacgagatatgctcactgtacctgttggtaagttagaac
cccagatgctgtcagtttcccgatgtctcaggctggcacttgtagtctcc
cctcccccagcctgaaacctgcttgctcggggtggagcttcctgctcatt
cgttctgccacgcccactgctggaacctgaggagccacacacgtgcacct
ttctactggacccgagattattcggcgggaatctggtcccctcccccttc
cttcataactagtgtcccaacaataaaatttgagctttgatcagaatgaa
tttgtcttagctccgtttcttctttcgcccagtctagattcctctcttac
agctcgagtagccttctcagtcgaaccgttcatgttgcgagctgctggcg
gccgcaacattttggcgccagaactgggacctgaagaatggcagagagat
gctaagaggaacactgctgtggagctccacaggaaaggaacagctttaat
ccactgccctcttctctcagttgaccaaatttgtccttctttttcaaggt
cccttccttcatgagtcacatactcattggtaaatgcaaggttttcaaag
ttaggatccagactttcctgggccaggccggtggggtcttcttagtttct
tataaggaaaacttggacaggcatggcttcttgagggatggcagagacat
gccctaaggactaattttgtgttgaggttgccaccagttgcattaaaact
cagtcctgattctgggcatggtggtgcatactgaagattatcaggcaata
tgagactgtagcagtcagagctgcaaagtgattcaaggccagtgaagcct
tggtcttc
gaattcctttcttctcatgaaacttaatttcttggattacttattgcaaa
gcttgacctcttaagtgtaagaacatggttatatacatgggtaggaacat
tagtcatatatacacaaatgtatacatatacacacatgtgtacatttata
catatgtatatgtatatatacacgtgcatatatatatatatatatataca
tatatacatacacatacacacacacacacacacacacacacattggtgtc
actcatagtagagaacccataaaagcactgacttaaatttcttttcaatt
tatccagctgattatacatcaaggacatattcttcatcatttacttcaag
ggaccgcagtgagaagggaaggtacagaggtgtgtgagggagagtgcaca
agattttgacaccagacaaacatgggtttaaacagtggcctcttcatata
ttagctgagtgacctggaaaagtagtttgctttgagtctcaaggtgtcag
tgatgttgttaacaggagacaacaatggcttctctctggagctgctgtga
caagtgcatgaggtgaggagataaagctcttaatgcagtgcttgaattag
gtgctgcctggcctctgctcatctgcttgctgctccactcttgacttcct
tagtcatcttctcctgatgaatttgttaacactgataagtacatctgaaa
catggaaaaaacagctccctttctctaagttgacagcaaaaccatggaca
aacctagatatattgttaggatcagagggttctgactcaaaagcattcac
tgtggtgaagagattgacattcagagaagttcgttattcagaaccccaga
aaaagcagtgaagatcttggggaacaaacactctctaaaaatttagggtt
accg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_13867126_13868233
seq2: B6Ng01-126N08.b_48_1155 (reverse)

seq1  GAAGA-CAAGGCCTCACTGGCCTTGAACTCACTTTGCAGCTCTGACTGGC  49
      ||||| |||||| |||||||||||||| ||||||||||||||||||| ||
seq2  GAAGACCAAGGCTTCACTGGCCTTGAA-TCACTTTGCAGCTCTGACT-GC  48

seq1  TACAGTCTCATACTCTGCCTGTATATC-TCAGTATGCACCACCATGCCCA  98
      ||||||||||||   ||||||   ||| ||||||||||||||||||||||
seq2  TACAGTCTCATA--TTGCCTGATAATCTTCAGTATGCACCACCATGCCCA  96

seq1  GAATCAGGACTGAGTTTTAAATGC-ACTGGTGGCACCCTCAACACATAA-  146
      |||||||||||||||||| ||||| |||||||||| |||||||||| || 
seq2  GAATCAGGACTGAGTTTT-AATGCAACTGGTGGCAACCTCAACACAAAAT  145

seq1  TAGT-CTTAGTGCATGTCTCTTGCCATCCCTCTAGAAGCCATGCCTGTCC  195
      |||| ||||| ||||||||| ||||||||||| |||||||||||||||||
seq2  TAGTCCTTAGGGCATGTCTC-TGCCATCCCTCAAGAAGCCATGCCTGTCC  194

seq1  -AGTTTTTCCTATAAGGAACTAAGAAGACCCCACCGGCCTGGCCCAGG-A  243
       |||||| | |||||| ||||||||||||||||||||||||||||||| |
seq2  AAGTTTTCCTTATAAGAAACTAAGAAGACCCCACCGGCCTGGCCCAGGAA  244

seq1  AGTCTGGATCCTAGCTTTGAAAACCTTGCATTTACCAATGAGTATGTGAC  293
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGATCCTAACTTTGAAAACCTTGCATTTACCAATGAGTATGTGAC  294

seq1  TCATGAAGGAAGGGACCTTGGAAAAGAAGGACAAATTTGGTTCAACTGAG  343
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  TCATGAAGGAAGGGACCTTGAAAAAGAAGGACAAATTTGG-TCAACTGAG  343

seq1  AGAAGAGGGCAGTGGATTAAAGCTGTTCCTTTCCTGTGGAGCTCCACAGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGGGCAGTGGATTAAAGCTGTTCCTTTCCTGTGGAGCTCCACAGC  393

seq1  AGTGTTCCTCTTAGCATCTCTCTGCCATTCTTCAGGTCCCAGTTCTGGCG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTCCTCTTAGCATCTCTCTGCCATTCTTCAGGTCCCAGTTCTGGCG  443

seq1  CCAAAATGTTGCGGCCGCCAGCAGCTCGCAACATGAACGGTTCGACTGAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATGTTGCGGCCGCCAGCAGCTCGCAACATGAACGGTTCGACTGAG  493

seq1  AAGGCTACTCGAGCTGTAAGAGAGGAATCTAGACTGGGCGAAAGAAGAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTACTCGAGCTGTAAGAGAGGAATCTAGACTGGGCGAAAGAAGAAA  543

seq1  CGGAGCTAAGACAAATTCATTCTGATCAAAGCTCAAATTTTATTGTTGGG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGCTAAGACAAATTCATTCTGATCAAAGCTCAAATTTTATTGTTGGG  593

seq1  ACACTAGTTATGAAGGAAGGGGGAGGGGACCAGATTCCCGCCGAATAATC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGTTATGAAGGAAGGGGGAGGGGACCAGATTCCCGCCGAATAATC  643

seq1  TCGGGTCCAGTAGAAAGGTGCACGTGTGTGGCTCCTCAGGTTCCAGCAGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGTCCAGTAGAAAGGTGCACGTGTGTGGCTCCTCAGGTTCCAGCAGT  693

seq1  GGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCGAGCAAGCAGGTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGTGGCAGAACGAATGAGCAGGAAGCTCCACCCCGAGCAAGCAGGTT  743

seq1  TCAGGCTGGGGGAGGGGAGACTACAAGTGCCAGCCTGAGACATCGGGAAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTGGGGGAGGGGAGACTACAAGTGCCAGCCTGAGACATCGGGAAA  793

seq1  CTGACAGCATCTGGGGTTCTAACTTACCAACAGGTACAGTGAGCATATCT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGCATCTGGGGTTCTAACTTACCAACAGGTACAGTGAGCATATCT  843

seq1  CGTTCAGGTCATTTGGAATTCGCCATGGTTTTCTCTCTTTCCAGCCTTCC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCAGGTCATTTGGAATTCGCCATGGTTTTCTCTCTTTCCAGCCTTCC  893

seq1  TTTGTAGGTTGTGGACTTTTCTCAGGATCGAGTTGGAGGAAGGAACACAT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAGGTTGTGGACTTTTCTCAGGATCGAGTTGGAGGAAGGAACACAT  943

seq1  GGACTGTGGGGCACTTACCTTTCTCTGCCTTTAAGAGCCAGATGAACTTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGTGGGGCACTTACCTTTCTCTGCCTTTAAGAGCCAGATGAACTTT  993

seq1  TTTTAAAGAGACAGTGAAGTGTCCAGAGAAGTGAGTTGGATATGGTTCAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGAGACAGTGAAGTGTCCAGAGAAGTGAGTTGGATATGGTTCAA  1043

seq1  AACAGTCTCTTTCTTTTGTTTTCTGAACTTAAAAGAAACCGTAACAAATG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCTCTTTCTTTTGTTTTCTGAACTTAAAAGAAACCGTAACAAATG  1093

seq1  CAACTGCTGGAATTC  1108
      |||||||||||||||
seq2  CAACTGCTGGAATTC  1108

seq1: chr9_13735367_13736267
seq2: B6Ng01-126N08.g_69_972

seq1  GAATTCCTTTCTTCTCATGAAACTTAATTTCTTGGATTACTTATTGCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCTTCTCATGAAACTTAATTTCTTGGATTACTTATTGCAAA  50

seq1  GCTTGACCTCTTAAGTGTAAGAACATGGTTATATACATGGGTAGGAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGACCTCTTAAGTGTAAGAACATGGTTATATACATGGGTAGGAACAT  100

seq1  TAGTCATATATACACAAATGTATACATATACACACATGTGTACATTTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATATATACACAAATGTATACATATACACACATGTGTACATTTATA  150

seq1  CATATGTATATGTATATATACACGTGCATATATATATATATATATATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTATATGTATATATACACGTGCATATATATATATATATATATACA  200

seq1  TATATACATACACATACACACACACACACACACACACACACATTGGTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATACACATACACACACACACACACACACACACACATTGGTGTC  250

seq1  ACTCATAGTAGAGAACCCATAAAAGCACTGACTTAAATTTCTTTTCAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATAGTAGAGAACCCATAAAAGCACTGACTTAAATTTCTTTTCAATT  300

seq1  TATCCAGCTGATTATACATCAAGGACATATTCTTCATCATTTACTTCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGCTGATTATACATCAAGGACATATTCTTCATCATTTACTTCAAG  350

seq1  GGACCGCAGTGAGAAGGGAAGGTACAGAGGTGTGTGAGGGAGAGTGCACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCGCAGTGAGAAGGGAAGGTACAGAGGTGTGTGAGGGAGAGTGCACA  400

seq1  AGATTTTGACACCAGACAAACATGGGTTTAAACAGTGGCCTCTTCATATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTGACACCAGACAAACATGGGTTTAAACAGTGGCCTCTTCATATA  450

seq1  TTAGCTGAGTGACCTGGAAAAGTAGTTTGCTTTGAGTCTCAAGGTGTCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGAGTGACCTGGAAAAGTAGTTTGCTTTGAGTCTCAAGGTGTCAG  500

seq1  TGATGTTGTTAACAGGAGACAACAATGGCTTCTCTCTGGAGCTGCTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTTGTTAACAGGAGACAACAATGGCTTCTCTCTGGAGCTGCTGTGA  550

seq1  CAAGTGCATGAGGTGAGGAGATAAAGCTCTTAATGCAGTGCTTGAATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCATGAGGTGAGGAGATAAAGCTCTTAATGCAGTGCTTGAATTAG  600

seq1  GTGCTGCCTGGCCTCTGCTCATCTGCTTGCTGCTCCACTCTTGACTTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCCTGGCCTCTGCTCATCTGCTTGCTGCTCCACTCTTGACTTCCT  650

seq1  TAGTCATCTTCTCCTGAATGAA-TTGTTAACACTGATAAGTACATCTGAA  699
      |||||||||||||||| ||||| |||||||||||||||||||||||||||
seq2  TAGTCATCTTCTCCTG-ATGAATTTGTTAACACTGATAAGTACATCTGAA  699

seq1  ACATGGAAAAAACAGCTCCC-TTCTCTAAGTTGACAGCAAAACCATGGAC  748
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACATGGAAAAAACAGCTCCCTTTCTCTAAGTTGACAGCAAAACCATGGAC  749

seq1  AAACCTAGATATAATG-TAAGATCAGAGGGTTCTGACTCAAAAGCATTCA  797
      ||||||||||||| || || ||||||||||||||||||||||||||||||
seq2  AAACCTAGATATATTGTTAGGATCAGAGGGTTCTGACTCAAAAGCATTCA  799

seq1  CTGTGGTGAAGAGATTGACATTCAGAGAAGTTCGTTATCCAGAACCCCAG  847
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTGTGGTGAAGAGATTGACATTCAGAGAAGTTCGTTATTCAGAACCCCAG  849

seq1  AGAAAGCAGTGAAGATCTTGGGG-ACAAACACTC-CTAAATATGTTAGGG  895
      | ||||||||||||||||||||| |||||||||| ||||| || ||||||
seq2  AAAAAGCAGTGAAGATCTTGGGGAACAAACACTCTCTAAAAAT-TTAGGG  898

seq1  TTACTG  901
      |||| |
seq2  TTACCG  904