BAC Information

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BAC

Clone NameB6Ng01-126P15
Chromosome2 (Build37)9 (Build37)
Map Location 95,864,173 - 95,865,4195,944,390 - 5,944,505
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042843
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126P15.bB6Ng01-126P15.g
ACCDH929212DH929213
length1,222492
definitionDH929212|Mus musculus domesticus DNA, BAC clone: B6Ng01-126P15, 5' end.DH929213|Mus musculus domesticus DNA, BAC clone: B6Ng01-126P15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(95,864,173 - 95,865,419)(5,944,390 - 5,944,505)
sequence
gaattccatacacttctctaaattgtgacaaatattcccattggattctg
catttcaagagaaaaatggcatattctcatatatcagcaattctattgct
gaaactacgaaaacatccatggtggtttgtgcatgagaagagcatccatg
atgcttcctcacataatacctgctaagacctgatagttattaagtattgt
tatattttatcagctttttgccatgtggactgaagtatcatgaaaaatgt
tacatgtattattttaaatcaagtttatacagaaacagcttagttaaata
aaaatggtaaccataatatcatgcacttacagcagttggtactcagtaaa
accttgtttaaattgatctcattagagattttttagcatctctagtatac
aataaaataacagctgtaagctgagatttaagtttctttcttttagatgt
attaacaattgtctataaaaataggagctccaaaaatttggttatgacag
gcatctaactaggagcagtgtttttctcactacactaagatttcatagct
agaggtcctgcagcctgactaatagtttccttcatgttgttggttttaat
gagatgtttgaaatttaagggaaatattcgtggtattttgcctcagagaa
aatagacaaattttctgctcaaatggtgatgatagtatcagccacagatt
agaatcagtcttcactgatagatagatcttgaatgtttgttttcatcgtc
tcttcctgttgtcatctcttctaaatctatttgtcctcaaaaaacatttt
tcccctttccatgataacctatacctattcccaaatctgacatattgatt
gatgtttaaatagagccatgtatgaaaatgacacctgaaaacaaaataga
tcaatgtaagttatccaagattgtgtcattatctctataaaaatgttaca
gcaagagatttttatcatgtggtattagttaagattgcaatttgatgtat
ttcaaacctcagcttgcaacccattattgtatcataatagtactgatgaa
actacagaagagggagaaaagaggataaatgttacaatacagaaaaagat
ggccacatgcattttctttgcattctactaagcagaatataaaacaaact
acttgtaattgaatggaatggttggatactcgcaacataatgccattagg
gaatagatatttcaacctttaa
ataaattcattgtttttaatagcagcgtagcactctattgtgcaaagttg
agactgcaggaaggaccaaccaggaactgccccacccggagatccatccc
ataaacaaccaccaaacccagacactactgcagatgtcaacaaattttgt
gacaggactctaaaatagctctctcctgtgaggctatgaaagcccctggc
aagtacagaagtggattctcacagtcagctattggatggaatacattggg
gacacaaggtccccaaggaaagagctagaaaaagtaccaaaggagctgaa
gggatctgcaaacctttaggatgaacaacaatattaactaaccagtatcc
ccagagctcgtttctctagctgcctatgtagcagaggatggcctagtcgg
ccatcaatgggaggagaggtccttggtcttgtgaagattttatgccccag
tataggggaatgccagggccaggaagcaggagtgggtgggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_95864173_95865419
seq2: B6Ng01-126P15.b_49_1270 (reverse)

seq1  TTAAAGGTTTTGAAATATCTATTCTCCTTATATGTCATTATTGTTGCTGA  50
      |||||||  ||||||||||||||| |||   ||| ||||| |||||| ||
seq2  TTAAAGG--TTGAAATATCTATTC-CCT--AATGGCATTA-TGTTGC-GA  43

seq1  GTAATCAAACAAATCAATTTCAAATTTACAAAGTAGTTTTTGTTTTATAT  100
      || ||| ||| | || | |||||  |||| ||||||  ||||||||||||
seq2  GT-ATCCAACCATTCCA-TTCAA--TTAC-AAGTAG--TTTGTTTTATAT  86

seq1  CTCTTGCTTAAGTAGAAAATGCAAAGAAAATGCATGTGGGCATTCTTTTC  150
       || ||||| |||||  |||||||||||||||||||||| |||  |||||
seq2  -TC-TGCTT-AGTAG--AATGCAAAGAAAATGCATGTGGCCATCTTTTTC  131

seq1  TGTATTGTAACATTTATCCTC-TTTCTCCCTCTTCTGTAGTTTTCATTCA  199
      ||||||||||||||||||||| |||||||||||||||||| ||||| |||
seq2  TGTATTGTAACATTTATCCTCTTTTCTCCCTCTTCTGTAG-TTTCA-TCA  179

seq1  GGTACTATTATTGATACAATAATGGGTTGCAAGCTGAGGTTTGAAAATAC  249
       ||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  -GTACTATTA-TGATACAATAATGGGTTGCAAGCTGAGGTTTG-AAATAC  226

seq1  ATCAAATTGCAATCTTAACTAATAACCACATGATAAAAATCTCTTGCTGT  299
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATCAAATTGCAATCTTAACTAAT-ACCACATGATAAAAATCTCTTGCTGT  275

seq1  AACATTTTTTATAGAGATAATGACACAATCTTGGATAACTTACATTGATC  349
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACA-TTTTTATAGAGATAATGACACAATCTTGGATAACTTACATTGATC  324

seq1  TATTTTGTTTTCAGGTGTCATTTTCATACATGGCTCTATTTAAACATCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTTTTCAGGTGTCATTTTCATACATGGCTCTATTTAAACATCAA  374

seq1  TCAATATGTCAGATTTGGGAATAGGTATAGGTTATCATGGAAAGGGGAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATATGTCAGATTTGGGAATAGGTATAGGTTATCATGGAAAGGGGAAA  424

seq1  AATGTTTTTTGAGGACAAATAGATTTAGAAGAGATGACAACAGGAAGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTTTGAGGACAAATAGATTTAGAAGAGATGACAACAGGAAGAGA  474

seq1  CGATGAAAACAAACATTCAAGATCTATCTATCAGTGAAGACTGATTCTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGAAAACAAACATTCAAGATCTATCTATCAGTGAAGACTGATTCTAA  524

seq1  TCTGTGGCTGATACTATCATCACCATTTGAGCAGAAAATTTGTCTATTTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGCTGATACTATCATCACCATTTGAGCAGAAAATTTGTCTATTTT  574

seq1  CTCTGAGGCAAAATACCACGAATATTTCCCTTAAATTTCAAACATCTCAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGGCAAAATACCACGAATATTTCCCTTAAATTTCAAACATCTCAT  624

seq1  TAAAACCAACAACATGAAGGAAACTATTAGTCAGGCTGCAGGACCTCTAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCAACAACATGAAGGAAACTATTAGTCAGGCTGCAGGACCTCTAG  674

seq1  CTATGAAATCTTAGTGTAGTGAGAAAAACACTGCTCCTAGTTAGATGCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAAATCTTAGTGTAGTGAGAAAAACACTGCTCCTAGTTAGATGCCT  724

seq1  GTCATAACCAAATTTTTGGAGCTCCTATTTTTATAGACAATTGTTAATAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAACCAAATTTTTGGAGCTCCTATTTTTATAGACAATTGTTAATAC  774

seq1  ATCTAAAAGAAAGAAACTTAAATCTCAGCTTACAGCTGTTATTTTATTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAGAAAGAAACTTAAATCTCAGCTTACAGCTGTTATTTTATTGT  824

seq1  ATACTAGAGATGCTAAAAAATCTCTAATGAGATCAATTTAAACAAGGTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAGAGATGCTAAAAAATCTCTAATGAGATCAATTTAAACAAGGTTT  874

seq1  TACTGAGTACCAACTGCTGTAAGTGCATGATATTATGGTTACCATTTTTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAGTACCAACTGCTGTAAGTGCATGATATTATGGTTACCATTTTTA  924

seq1  TTTAACTAAGCTGTTTCTGTATAAACTTGATTTAAAATAATACATGTAAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTAAGCTGTTTCTGTATAAACTTGATTTAAAATAATACATGTAAC  974

seq1  ATTTTTCATGATACTTCAGTCCACATGGCAAAAAGCTGATAAAATATAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCATGATACTTCAGTCCACATGGCAAAAAGCTGATAAAATATAAC  1024

seq1  AATACTTAATAACTATCAGGTCTTAGCAGGTATTATGTGAGGAAGCATCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTTAATAACTATCAGGTCTTAGCAGGTATTATGTGAGGAAGCATCA  1074

seq1  TGGATGCTCTTCTCATGCACAAACCACCATGGATGTTTTCGTAGTTTCAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCTCTTCTCATGCACAAACCACCATGGATGTTTTCGTAGTTTCAG  1124

seq1  CAATAGAATTGCTGATATATGAGAATATGCCATTTTTCTCTTGAAATGCA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGAATTGCTGATATATGAGAATATGCCATTTTTCTCTTGAAATGCA  1174

seq1  GAATCCAATGGGAATATTTGTCACAATTTAGAGAAGTGTATGGAATTC  1247
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCAATGGGAATATTTGTCACAATTTAGAGAAGTGTATGGAATTC  1222

seq1: chr9_5944390_5944505
seq2: B6Ng01-126P15.g_451_566 (reverse)

seq1  AACCCACCCACTCCCACTTCCTGGCCCTGACATTGCCCTATACTGGGGCA  50
      ||||||||||||||  ||||||||||||| |||| |||||||||||||||
seq2  AACCCACCCACTCCTGCTTCCTGGCCCTGGCATTCCCCTATACTGGGGCA  50

seq1  TAGAACCTTCCCAAGACCAAGGGCCTCTCCTCCCATTGATGACCAACTAG  100
      || || |||| ||||||||||| |||||||||||||||||| || |||||
seq2  TAAAATCTTCACAAGACCAAGGACCTCTCCTCCCATTGATGGCCGACTAG  100

seq1  GCCATCCTCTGCTACA  116
      ||||||||||||||||
seq2  GCCATCCTCTGCTACA  116