BAC Information

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BAC

Clone NameB6Ng01-130J24
Chromosome9 (Build37)
Map Location 79,067,500 - 79,068,569
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041074, Gsta1, LOC666367, LOC100042295, LOC666373, LOC100042314, Omt2a, EG666383, Omt2b, Gsta2, Dppa5, 2410146L05Rik, LOC666408, LOC100042356, LOC666419, E330016A19Rik, Mto1, Eef1a1, Slc17a5, Cd109, LOC384957, EG666456
Downstream geneLOC436085, LOC235509, LOC666479, Col12a1, Cox7a2, Tmem30a, Filip1, LOC100041218, LOC666490, Senp6, LOC100041249, Myo6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130J24.bB6Ng01-130J24.g
ACCDH931892DH931893
length1,0191,064
definitionDH931892|Mus musculus domesticus DNA, BAC clone: B6Ng01-130J24, 5' end.DH931893|Mus musculus domesticus DNA, BAC clone: B6Ng01-130J24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtgccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttatctatatatattggatgttagtcccc
tatctgatttaggataggtaaagatcctttcccaaactgttggtggcctt
tttgtcttattgacggtgtcttttgccttacagaagctttgcaattttat
gaggtcccatttgtcgattctcaatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggcttttccccact
ttttcctcaataagtttcactgtctttggttttatgtagagttccttgat
ccacttagatttgaccttagtacaaggagataggaatggatcaattcgca
ttcttctacatgataacaaacagttgtatcagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctcttgctataccagtaccatgcagttattttcacatattgc
tttgtagtacagcttttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatttgcagattgccctttctaatttgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
ttttacatattgattcctgccaatccatgaacatgaaaaatctttccatc
ttctgagatctttaattttctttcttcgagacttgaagttcttatcatac
agatctttcacttccttagttagagtcatgccaagatatttatattaatt
gtgactatgagaagggtgttgtttcctatttcttccagctgttatccttg
tgtacagaagggcattgac
gaattcccagaggaacaatgagttgtgaaaataagtatctgttagggaaa
aaaaaaaggccagaagttttaagaccttgaataattcatttgcctggcct
accctccctcgccagttacttgcgaatggattttgtttgtggagatgaag
aacatgtgcatggcccaatccaatgcacaaggggataatttatagacaaa
gctgagtagacagagtcaggtctgtagagcctcacgggggtgagtgtagc
ctaaccatagtacaaaacacccagtgacatatgaaagaaaagaataatgt
ccagactaacggatctttgaaccacaggaaggaggtagtttgagtttgct
gtcttatataatcatgctgagatcactgagaaggtgatatgtcaacagaa
atctgaagaaaacaagatgcagaaattcatgctatttgtgaaagaatgga
attgttctgcttcaatggaacaggccatgaaaagcaacatcaggctaagg
atccatgaagaacagaaatgaagtccctgttcctgcagcagagacactga
gggaagaagaccaagtggcaacgccagaactgttacgtggtgcagaccac
aagccttaggggcacatgaaggattttggctcctactgaaaagaggaaat
cttggaggaatttgaactgataggtaatatagaatctttggacttcttcc
ctcatattttccctttcctaaaataccagttacctgaagttcctcatcct
tctcttcactatgaatagttctagatgctaatctctgttccttgaacaca
tccccagttttcacttggcctgtgcttgaccactagttactcttctagaa
gctcttcagtcacagattcagtggaagtgtctatctttttccaagaaggc
gtgaatagatgcccttacaatgatcatccatggcatacatcttccagaca
aatttgttggaatatgaataaatagaaaaaccccattacagtctttaaac
gaatgcttgcccatgagtctagagctttccagtactgttatcagggatgt
tctccaaaggctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_79067500_79068569
seq2: B6Ng01-130J24.g_68_1131

seq1  GAATTCCCAGAGGAACAATGAGTTGTGAAAATAAGTATCTGTTAGGGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAGGAACAATGAGTTGTGAAAATAAGTATCTGTTAGGGAAA  50

seq1  AAAAAAAGGCCAGAAGTTTTAAGACCTTGAATAATTCATTTGCCTGGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGGCCAGAAGTTTTAAGACCTTGAATAATTCATTTGCCTGGCCT  100

seq1  ACCCTCCCTCGCCAGTTACTTGCGAATGGATTTTGTTTGTGGAGATGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCCTCGCCAGTTACTTGCGAATGGATTTTGTTTGTGGAGATGAAG  150

seq1  AACATGTGCATGGCCCAATCCAATGCACAAGGGGATAATTTATAGACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGTGCATGGCCCAATCCAATGCACAAGGGGATAATTTATAGACAAA  200

seq1  GCTGAGTAGACAGAGTCAGGTCTGTAGAGCCTCACGGGGGTGAGTGTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGTAGACAGAGTCAGGTCTGTAGAGCCTCACGGGGGTGAGTGTAGC  250

seq1  CTAACCATAGTACAAAACACCCAGTGACATATGAAAGAAAAGAATAATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACCATAGTACAAAACACCCAGTGACATATGAAAGAAAAGAATAATGT  300

seq1  CCAGACTAACGGATCTTTGAACCACAGGAAGGAGGTAGTTTGAGTTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTAACGGATCTTTGAACCACAGGAAGGAGGTAGTTTGAGTTTGCT  350

seq1  GTCTTATATAATCATGCTGAGATCACTGAGAAGGTGATATGTCAACAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATATAATCATGCTGAGATCACTGAGAAGGTGATATGTCAACAGAA  400

seq1  ATCTGAAGAAAACAAGATGCAGAAATTCATGCTATTTGTGAAAGAATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAGAAAACAAGATGCAGAAATTCATGCTATTTGTGAAAGAATGGA  450

seq1  ATTGTTCTGCTTCAATGGAACAGGCCATGAAAAGCAACATCAGGCTAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTCTGCTTCAATGGAACAGGCCATGAAAAGCAACATCAGGCTAAGG  500

seq1  ATCCATGAAGAACAGAAATGAAGTCCCTGTTCCTGCAGCAGAGACACTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGAAGAACAGAAATGAAGTCCCTGTTCCTGCAGCAGAGACACTGA  550

seq1  GGGAAGAAGACCAAGTGGCAACGCCAGAACTGTTACGTGGTGCAGACCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAAGACCAAGTGGCAACGCCAGAACTGTTACGTGGTGCAGACCAC  600

seq1  AAGCCTTAGGGGCACATGAAGGATTTTGGCTCCTACTGAAAAGAGGAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTAGGGGCACATGAAGGATTTTGGCTCCTACTGAAAAGAGGAAAT  650

seq1  CTTGGAGGAATTTGAACTGATAGGTAATATAGAATCTTTGGACTTCTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGGAATTTGAACTGATAGGTAATATAGAATCTTTGGACTTCTTCC  700

seq1  CTCATATTTTCCCTTTCCTAAAATACCAGTTACCTGAAGTTCCTCATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATATTTTCCCTTTCCTAAAATACCAGTTACCTGAAGTTCCTCATCCT  750

seq1  TCTCTTCACTATGAATAGTTCTAGATGCTAATCTCTGTTCCTTGAACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCACTATGAATAGTTCTAGATGCTAATCTCTGTTCCTTGAACACA  800

seq1  TCCCCAGTTTTCACTTGGCCTGTGCTTGACCACTAGTTACTCTTCTAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGTTTTCACTTGGCCTGTGCTTGACCACTAGTTACTCTTCTAGAA  850

seq1  GCTCTTCAGTCACAGATTCAGTGGAAGTGTCTATCTTTTTCCAAGAAGGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCAGTCACAGATTCAGTGGAAGTGTCTATCTTTTTCCAAGAAGGC  900

seq1  GTGAATAGATGCCCTTACAATGATCATCCATGGCATACATCTTCCAGACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTGAATAGATGCCCTTACAATGATCATCCATGGCATACATCTTCCAGAC-  949

seq1  AAATTTGTTGGAATATGAATAAATAGAAAAACCCCATTAACAGTTCTTTA  1000
      |||||||||||||||||||||||||||||||||||||| |||| ||||| 
seq2  AAATTTGTTGGAATATGAATAAATAGAAAAACCCCATT-ACAG-TCTTT-  996

seq1  AAACGAAATGCTTGCCCATGAGGTTCTAGAGCTTTCCAGTACTGTTATCA  1050
      ||||| ||||||||||||||||  ||||||||||||||||||||||||||
seq2  AAACG-AATGCTTGCCCATGAG--TCTAGAGCTTTCCAGTACTGTTATCA  1043

seq1  GGGATGTTCT-CAAAGGCTCA  1070
      |||||||||| ||||||||||
seq2  GGGATGTTCTCCAAAGGCTCA  1064