BAC Information

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BAC

Clone NameB6Ng01-130O15
Chromosome9 (Build37)
Map Location 91,808,389 - 91,809,499
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434428, LOC621576, Zic1, Zic4
Downstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850, Plscr4, Plod2, LOC100039921, LOC100039931, LOC100039944, LOC667009
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130O15.bB6Ng01-130O15.g
ACCDH932106DH932107
length1,110292
definitionDH932106|Mus musculus domesticus DNA, BAC clone: B6Ng01-130O15, 5' end.DH932107|Mus musculus domesticus DNA, BAC clone: B6Ng01-130O15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttttattaatttaactattttcagtttcttattcaaattcattt
cttaaattttattcaactgttcgtccatgtcctttccctgcccccttgca
catagttataattgctgtctaaaatccctgtcttgtgtatttcttaagaa
acattatagtgagggtgcttattcctgatgaagacatgtctttttgctta
ttcatgttgctaatgctttagggataaaacctagacatctggacttaggt
catcagtaatgtttcttagtgtagatatctttcttcctcttgttgagtga
tttgatgtttatttgctgttacaaattgtcaggttgtagaccagatgaat
ggtacttttgattagtcttggggccagtctttgttggtgtatcagaaata
gtctcagctcagatgtattctatgtgatatttctaagcatagggacagat
ctatagagttcaaagtttctcattatctttaagagtttgggaagggctca
ggattcctccttaggcaacaaagtgggtggagtctgggattcctacctag
aaaaaaggtccaggcaggagttaaaaaaacgtgtggcctttagagagaca
acagaggtgtttggggttggcagcatgagtttgaaattgatgtgagacag
gcatggaacattcatttctcagagagaccatggattagggtagaacttgt
ggcacaagtcagggggtcctatctggaagtagggtacagggtgaatgcag
agcagagaacctcaagaatgcagtagaagtaagcaataacactttgaatg
tcataaatgtaaccaaatacttgctatttaacgttcacaccacaagatac
atacttatcactgttactgaggccaaagagtggttcaaacaatcatggac
actaatatagaaactatacagtaatgctttttttataccgatgaactatt
gcatctctcaaaccttgtcagaagagcttcgtttgcagtagagactaagg
aggagtaacctataatctggtgattaactataaagaactacatctggtct
atgtaaagagataagaggttgtggaaattctccatccacattcctttccc
aagacttatg

tcaggcaaatagatggaactagaaaatatcattctgagtgaggtaaccca
gacacaaaagaacacacatggtatatgcccactggtaagtgaatattagc
cccaaagttcacaatacccatgatataactgacagatcatatgaatctca
agaagaaggaagaccaaagtgtgaattcttcagtcctacttagaaggagg
aacaaaataagatagagtaagggagggatatgaaaggaagagacgaatga
gaggaaaaaagtggggatggatcatgtgtgggtggagatggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_91808389_91809499
seq2: B6Ng01-130O15.b_49_1158 (reverse)

seq1  CATAAGCTTTGGGAAAGGGAGATGTGGATGGAGAA-TTCCACAGACTCTT  49
      ||||||  ||||||||||   |||||||||||||| |||||||  |||||
seq2  CATAAGTCTTGGGAAAGG--AATGTGGATGGAGAATTTCCACAACCTCTT  48

seq1  ATCTCTATACATAGACCAGATGTAGTTCTCTAT-GTTAATCACCAGA-TA  97
      |||||| |||||||||||||||||||||| ||| ||||||||||||| ||
seq2  ATCTCTTTACATAGACCAGATGTAGTTCTTTATAGTTAATCACCAGATTA  98

seq1  TAGGTTACTCCTCCTTAGTCTCTACTGCAAAACGAAGCTCTTCTGACAAG  147
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAGGTTACTCCTCCTTAGTCTCTACTGC-AAACGAAGCTCTTCTGACAAG  147

seq1  GTTTGAGAGATGCAATAGTTCATCGGTATAAAAAAAGCATTACTGTATAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGAGATGCAATAGTTCATCGGTATAAAAAAAGCATTACTGTATAG  197

seq1  TTTCTATATTAGTGTCCATGATTGTTTGAACCACTCTTTTGGCCTCAGTA  247
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTTCTATATTAGTGTCCATGATTGTTTGAACCACTC-TTTGGCCTCAGTA  246

seq1  ACAGTGATAAGTATGTATCTTGTGGTGTGAACGTTAAATAGCAAGTATTT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGATAAGTATGTATCTTGTGGTGTGAACGTTAAATAGCAAGTATTT  296

seq1  GGTTACATTTATGACATTCAAAGTGTTATTGCTTACTTCTACTGCATTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACATTTATGACATTCAAAGTGTTATTGCTTACTTCTACTGCATTCT  346

seq1  TGAGGTTCTCTGCTCTGCATTCACCCTGTACCCTACTTCCAGATAGGACC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTCTCTGCTCTGCATTCACCCTGTACCCTACTTCCAGATAGGACC  396

seq1  CCCTGACTTGTGCCACAAGTTCTACCCTAATCCATGGTCTCTCTGAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGACTTGTGCCACAAGTTCTACCCTAATCCATGGTCTCTCTGAGAAA  446

seq1  TGAATGTTCCATGCCTGTCTCACATCAATTTCAAACTCATGCTGCCAACC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTCCATGCCTGTCTCACATCAATTTCAAACTCATGCTGCCAACC  496

seq1  CCAAACACCTCTGTTGTCTCTCTAAAGGCCACACGTTTTTTTAACTCCTG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACACCTCTGTTGTCTCTCTAAAGGCCACACGTTTTTTTAACTCCTG  546

seq1  CCTGGACCTTTTTTCTAGGTAGGAATCCCAGACTCCACCCACTTTGTTGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGACCTTTTTTCTAGGTAGGAATCCCAGACTCCACCCACTTTGTTGC  596

seq1  CTAAGGAGGAATCCTGAGCCCTTCCCAAACTCTTAAAGATAATGAGAAAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGGAGGAATCCTGAGCCCTTCCCAAACTCTTAAAGATAATGAGAAAC  646

seq1  TTTGAACTCTATAGATCTGTCCCTATGCTTAGAAATATCACATAGAATAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACTCTATAGATCTGTCCCTATGCTTAGAAATATCACATAGAATAC  696

seq1  ATCTGAGCTGAGACTATTTCTGATACACCAACAAAGACTGGCCCCAAGAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGCTGAGACTATTTCTGATACACCAACAAAGACTGGCCCCAAGAC  746

seq1  TAATCAAAAGTACCATTCATCTGGTCTACAACCTGACAATTTGTAACAGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAAAGTACCATTCATCTGGTCTACAACCTGACAATTTGTAACAGC  796

seq1  AAATAAACATCAAATCACTCAACAAGAGGAAGAAAGATATCTACACTAAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAACATCAAATCACTCAACAAGAGGAAGAAAGATATCTACACTAAG  846

seq1  AAACATTACTGATGACCTAAGTCCAGATGTCTAGGTTTTATCCCTAAAGC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTACTGATGACCTAAGTCCAGATGTCTAGGTTTTATCCCTAAAGC  896

seq1  ATTAGCAACATGAATAAGCAAAAAGACATGTCTTCATCAGGAATAAGCAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCAACATGAATAAGCAAAAAGACATGTCTTCATCAGGAATAAGCAC  946

seq1  CCTCACTATAATGTTTCTTAAGAAATACACAAGACAGGGATTTTAGACAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTATAATGTTTCTTAAGAAATACACAAGACAGGGATTTTAGACAG  996

seq1  CAATTATAACTATGTGCAAGGGGGCAGGGAAAGGACATGGACGAACAGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTATAACTATGTGCAAGGGGGCAGGGAAAGGACATGGACGAACAGTT  1046

seq1  GAATAAAATTTAAGAAATGAATTTGAATAAGAAACTGAAAATAGTTAAAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAAATTTAAGAAATGAATTTGAATAAGAAACTGAAAATAGTTAAAT  1096

seq1  TAATAAAAGAATTC  1111
      ||||||||||||||
seq2  TAATAAAAGAATTC  1110


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