BAC Information

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BAC

Clone NameB6Ng01-131P08
Chromosome9 (Build37)
Map Location 92,905,516 - 92,998,114
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC331000, Plscr1, Plscr2, 1700057G04Rik, LOC666850, Plscr4, Plod2, LOC100039921, LOC100039931, LOC100039944, LOC667009, LOC100040114
Downstream geneLOC674371
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131P08.bB6Ng01-131P08.g
ACCDH932886DH932887
length9491,195
definitionDH932886|Mus musculus domesticus DNA, BAC clone: B6Ng01-131P08, 5' end.DH932887|Mus musculus domesticus DNA, BAC clone: B6Ng01-131P08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,905,516 - 92,906,291)(92,996,909 - 92,998,114)
sequence
gaattcatttcattattgtctgataaacataaacagagtggtatcactat
ggatggttagaatatcgtttgtcttttaagtagtcttcaattacaagctt
gtcagtcaagaaggtagtatcaagatggtggaacaataagaagtgtagtg
aaaagtagtgaggccacataggctcacataaacaaaaaagttaattctgt
tttcacagattgggtttggcaaaactgaagtaaattagcccccttatgag
cagaaatcatcaacctgcaagaaattatccttcctttatttgttttctgt
taggtgttttgtttcagcaatggaaaatataaccaatacagatatttgtt
accataactgggatcactgttataacaatcctgatcatgtggttcataga
ctctcagaaatactctgtgtgagggatatggaagagtttggtattttgtg
ctagaaaaatgttataatgctctaagcaaaattgaatggctcattgttat
cagaatttgaaaaattaacatgctagagaaatgcacatagcagaagcccc
agctcctgagatttcagatagaaacaagaactctaccggaaatttggcta
tccttactactgcaatcttggtaagagccttgctgtattctacctgtgtc
ctgagaaattgcatgagaccaaatttaaaagtaaagtactaatttgttgg
gtggaacaaatgttcagacagggtaggatccagattgtgtcatggccccc
actcttatctaagtctacagtcaaagagagggagagaactagcataaaag
agaagacaatgtgctctttggaaagaaatgaagggagtttaaagttgcac
gcacatcaagtattgatattcagcggttaattgtttacaatattagtaac
attaaagagaaacctctttaaacctcctctcagactaggtggtttctgg
gaattcaacacgagatgggatgtttagatgttttggacttagaattctga
tcacgggcacatgagcataatgcttccctgaggagaaatattaaaagcaa
aaggcttcagttaaacttataaagaaagtacaaataatgagaaatgccac
aaatattctctaagaaaaactgtagcaacccagactattcatatgctaat
gtcagcctgtccttttcctttataaacttcagccaactaaaaatgttaac
aaccataattccagaaacttcaccatggataattaactcaaatactagga
gtatcagtcaactcggaatttgcttgatgaaagtggttcttgcccaggta
tattaccatagttacatgtctttatggtattcactttcttctttcagaac
atcaggctctgcaaataccatttgatagccttctattgtttcaaaaatta
ctaaatattttaaattaactttttaaaatcagtaatattataccagtaag
aaacccaacaagtaaaagtgtttgcaccaaatccaatgacttgagtttga
tcccagaatccaccaaggaaagagagagaaatcactctacaaagtcctct
gactagtgaacacacttcccatgcagacacaaagtcaatttaaaatgtga
tatgctatatgaaatcatctctgcatttatttcatttctgcaaaaaccca
ctcctaaatttggtgtaggaataacaaagaattatgccactattataact
tttcaatgtagtttttttgccagaatacctatatataaaggtaacttaga
ctcaaagagatttaaatttgcataatattaactttgtatttccattctaa
aacagactgatgcccagtaccagaccctctcttggtttgattttaacatt
taatttagtcagagtagtgacacagcatttatattttttaatcatagaaa
atttctctaactcagacttgaatgttcagttggctgtgtgagaattctgc
agagacctttcacagataccttagtgtttttagttagatcatatactaaa
tgtaaaacatagacaatcttcctctatttaggtacttttatattggttgt
acacttattctattgctcttttcatcacctttatttccaaggccataatc
tattgaacatatttctgaggagaatctgaggctggtccatcaggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_92905516_92906291
seq2: B6Ng01-131P08.b_46_821

seq1  GAATTCATTTCATTATTGTCTGATAAACATAAACAGAGTGGTATCACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCATTATTGTCTGATAAACATAAACAGAGTGGTATCACTAT  50

seq1  GGATGGTTAGAATATCGTTTGTCTTTTAAGTAGTCTTCAATTACAAGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGTTAGAATATCGTTTGTCTTTTAAGTAGTCTTCAATTACAAGCTT  100

seq1  GTCAGTCAAGAAGGTAGTATCAAGATGGTGGAACAATAAGAAGTGTAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTCAAGAAGGTAGTATCAAGATGGTGGAACAATAAGAAGTGTAGTG  150

seq1  AAAAGTAGTGAGGCCACATAGGCTCACATAAACAAAAAAGTTAATTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTAGTGAGGCCACATAGGCTCACATAAACAAAAAAGTTAATTCTGT  200

seq1  TTTCACAGATTGGGTTTGGCAAAACTGAAGTAAATTAGCCCCCTTATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACAGATTGGGTTTGGCAAAACTGAAGTAAATTAGCCCCCTTATGAG  250

seq1  CAGAAATCATCAACCTGCAAGAAATTATCCTTCCTTTATTTGTTTTCTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATCATCAACCTGCAAGAAATTATCCTTCCTTTATTTGTTTTCTGT  300

seq1  TAGGTGTTTTGTTTCAGCAATGGAAAATATAACCAATACAGATATTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTTTTGTTTCAGCAATGGAAAATATAACCAATACAGATATTTGTT  350

seq1  ACCATAACTGGGATCACTGTTATAACAATCCTGATCATGTGGTTCATAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAACTGGGATCACTGTTATAACAATCCTGATCATGTGGTTCATAGA  400

seq1  CTCTCAGAAATACTCTGTGTGAGGGATATGGAAGAGTTTGGTATTTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAGAAATACTCTGTGTGAGGGATATGGAAGAGTTTGGTATTTTGTG  450

seq1  CTAGAAAAATGTTATAATGCTCTAAGCAAAATTGAATGGCTCATTGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAAATGTTATAATGCTCTAAGCAAAATTGAATGGCTCATTGTTAT  500

seq1  CAGAATTTGAAAAATTAACATGCTAGAGAAATGCACATAGCAGAAGCCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTGAAAAATTAACATGCTAGAGAAATGCACATAGCAGAAGCCCC  550

seq1  AGCTCCTGAGATTTCAGATAGAAACAAGAACTCTACCGGAAATTTGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTGAGATTTCAGATAGAAACAAGAACTCTACCGGAAATTTGGCTA  600

seq1  TCCTTACTACTGCAATCTTGGTAAGAGCCTTGCTGTATTCTACCTGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTACTACTGCAATCTTGGTAAGAGCCTTGCTGTATTCTACCTGTGTC  650

seq1  CTGAGAAATTGCATGAGACCAAATTTAAAAGTAAAGTACTAATTTGTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAAATTGCATGAGACCAAATTTAAAAGTAAAGTACTAATTTGTTGG  700

seq1  GTGGAACAAATGTTCAGACAGGGTAGGATCCAGATTGTGTCATGGCCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAACAAATGTTCAGACAGGGTAGGATCCAGATTGTGTCATGGCCCCC  750

seq1  ACTCTTATCTAAGTCTACAGTCAAAG  776
      ||||||||||||||||||||||||||
seq2  ACTCTTATCTAAGTCTACAGTCAAAG  776

seq1: chr9_92996909_92998114
seq2: B6Ng01-131P08.g_69_1263 (reverse)

seq1  ACCTGAATGGACCAGCCTTTCTGAGTTTCCTTCCTCAG-AATATGGTCAT  49
      ||||| ||||||||||    || || |||  ||||||| |||||| ||| 
seq2  ACCTG-ATGGACCAGC----CTCAGATTC--TCCTCAGAAATATGTTCAA  43

seq1  TAGATTGTATGCCCCTGGGAAATAAAAAGGTGATGAAAAAGAGCAATAGA  99
      |||||  ||||  ||| ||||||  |||||||||| ||||||||||||||
seq2  TAGAT--TATG-GCCTTGGAAAT--AAAGGTGATG-AAAAGAGCAATAGA  87

seq1  ATAAGTGTAAAAACAAATAATAAAGTA-CTAAATAGA-GAAGATTGTCTA  147
      |||||||| | ||| ||||  |||||| ||||||||| ||||||||||||
seq2  ATAAGTGT-ACAACCAATATAAAAGTACCTAAATAGAGGAAGATTGTCTA  136

seq1  TG-TTTACATTTAGTATGATGATCTAAACTAAAAACAATTAGGTATCTGT  196
      || |||||||||||||| ||||||| ||||||||||| | ||||||||||
seq2  TGTTTTACATTTAGTAT-ATGATCT-AACTAAAAACACTAAGGTATCTGT  184

seq1  GAAAGGTCTCTGCAGAATTCTCACACAGACAACTGAACATTCAAGTCTGA  246
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAAAGGTCTCTGCAGAATTCTCACACAGCCAACTGAACATTCAAGTCTGA  234

seq1  GTTAGAGAAATTTTCTATGATT-AAAAATATAAATGCTGTGTCACTACTC  295
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GTTAGAGAAATTTTCTATGATTAAAAAATATAAATGCTGTGTCACTACTC  284

seq1  TGACTAAATTAATGTTTAAAATCAAACCAAGAGAGGGTCTGGTACTGGGC  345
      ||||||||||||   |||||||||||||||||||||||||||||||||||
seq2  TGACTAAATTAAATGTTAAAATCAAACCAAGAGAGGGTCTGGTACTGGGC  334

seq1  ATCAGTCTGTTTTAGAATGGAAATACAAAGTTAATATTATGCAAATTTAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTCTGTTTTAGAATGGAAATACAAAGTTAATATTATGCAAATTTAA  384

seq1  ATCTCTTTGAGTCTAAGTTACCTTTATATATAGGTATTCTGGCAAAAAAA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTTGAGTCTAAGTTACCTTTATATATAGGTATTCTGGCAAAAAAA  434

seq1  CTACATTGAAAAGTTATAATAGTGGCATAATTCTTTGTTATTCCTACACC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTGAAAAGTTATAATAGTGGCATAATTCTTTGTTATTCCTACACC  484

seq1  AAATTTAGGAGTGGGTTTTTGCAGAAATGAAATAAATGCAGAGATGATTT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGGAGTGGGTTTTTGCAGAAATGAAATAAATGCAGAGATGATTT  534

seq1  CATATAGCATATCACATTTTAAATTGACTTTGTGTCTGCATGGGAAGTGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGCATATCACATTTTAAATTGACTTTGTGTCTGCATGGGAAGTGT  584

seq1  GTTCACTAGTCAGAGGACTTTGTAGAGTGATTTCTCTCTCTTTCCTTGGT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTAGTCAGAGGACTTTGTAGAGTGATTTCTCTCTCTTTCCTTGGT  634

seq1  GGATTCTGGGATCAAACTCAAGTCATTGGATTTGGTGCAAACACTTTTAC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTGGGATCAAACTCAAGTCATTGGATTTGGTGCAAACACTTTTAC  684

seq1  TTGTTGGGTTTCTTACTGGTATAATATTACTGATTTTAAAAAGTTAATTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGGTTTCTTACTGGTATAATATTACTGATTTTAAAAAGTTAATTT  734

seq1  AAAATATTTAGTAATTTTTGAAACAATAGAAGGCTATCAAATGGTATTTG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTTAGTAATTTTTGAAACAATAGAAGGCTATCAAATGGTATTTG  784

seq1  CAGAGCCTGATGTTCTGAAAGAAGAAAGTGAATACCATAAAGACATGTAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCTGATGTTCTGAAAGAAGAAAGTGAATACCATAAAGACATGTAA  834

seq1  CTATGGTAATATACCTGGGCAAGAACCACTTTCATCAAGCAAATTCCGAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGTAATATACCTGGGCAAGAACCACTTTCATCAAGCAAATTCCGAG  884

seq1  TTGACTGATACTCCTAGTATTTGAGTTAATTATCCATGGTGAAGTTTCTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGATACTCCTAGTATTTGAGTTAATTATCCATGGTGAAGTTTCTG  934

seq1  GAATTATGGTTGTTAACATTTTTAGTTGGCTGAAGTTTATAAAGGAAAAG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATGGTTGTTAACATTTTTAGTTGGCTGAAGTTTATAAAGGAAAAG  984

seq1  GACAGGCTGACATTAGCATATGAATAGTCTGGGTTGCTACAGTTTTTCTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCTGACATTAGCATATGAATAGTCTGGGTTGCTACAGTTTTTCTT  1034

seq1  AGAGAATATTTGTGGCATTTCTCATTATTTGTACTTTCTTTATAAGTTTA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATATTTGTGGCATTTCTCATTATTTGTACTTTCTTTATAAGTTTA  1084

seq1  ACTGAAGCCTTTTGCTTTTAATATTTCTCCTCAGGGAAGCATTATGCTCA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAGCCTTTTGCTTTTAATATTTCTCCTCAGGGAAGCATTATGCTCA  1134

seq1  TGTGCCCGTGATCAGAATTCTAAGTCCAAAACATCTAAACATCCCATCTC  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCGTGATCAGAATTCTAAGTCCAAAACATCTAAACATCCCATCTC  1184

seq1  GTGTTGAATTC  1206
      |||||||||||
seq2  GTGTTGAATTC  1195