BAC Information

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BAC

Clone NameB6Ng01-132A07
Chromosome9 (Build37)
Map Location 116,249,741 - 116,250,960
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039567, LOC670467, EG546164, Gadl1, EG668829, Tgfbr2, LOC100043817, LOC100043819, D730003K21Rik
Downstream geneRbms3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132A07.bB6Ng01-132A07.g
ACCDH932932DH932933
length1,189487
definitionDH932932|Mus musculus domesticus DNA, BAC clone: B6Ng01-132A07, 5' end.DH932933|Mus musculus domesticus DNA, BAC clone: B6Ng01-132A07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacccccagcacctctacagtgccttataactctgttaattaca
gtctcaggggatctgaagccttcttttgaccttctcgggcaccagacata
taggcggtacacatacatatatgtaggcagatatgcacacataagataat
gaaacaaatcttaaaaagtcaaaacacaccattaacaaaaacccagacaa
aaaaatcataatcagaagaactgaacaggctgtgagtttcatctctctgc
cttcagcaagacatcctaagggagaaatagaaaggaagacagagtgtgat
aaaattaaataaacatattttgcacttaagtaaaaaacagttttatttca
tagattttctttctacttgctgtgcattgttgggcaggtttcatagttgc
tatggtttccagtttcatattcacagtcaaagggttagagagatgaatca
gtggtaaaagcaaaaagtacctgagtttgctttccagaacttaagttaag
gttggctcttttgagagtaacagggatctgatgccctcttctggtctcta
tgggcactgcactcaattgcatagacacacaggcatgcaaacataattaa
acagaaaatcaagtctttgcacaacacagataaagacagttactcactta
taggctaataagagggttaaattaaagtgatattcatgaagttcctaaaa
atgtcttatacaaagacaaaaatcaacaaaatggaaattatagtttatag
tttaactacttgttcataaaaacgactctaatattttcatgttaacacaa
gtgaaacctctgtgaagagatgtattgagttctgtaaagctaagaatact
ctgaggacagagatgggattgtgggcagtgtttggtatcctggcttagag
ttccccctatgaactctttggtgaacgcttctttatattttgatggagtt
gagaatctggaatatacagtccagagagatgactcagtggttaaagtgta
tagtgtgttcatagccacaccacccatcagtagctcacaactgtctgcag
cttcagctccagggtatctctttgcttctacagggcatgaatgcattgca
tgaaacaaccaccagcatgcacaccacccaccacgtgatttgactaatta
aaatagtggggtcatgactgcaaatttgtctgtgtacca

tccttcgcctaggacgtgtcactccctgattggctgcagcccatcggccg
agttgacgtcacggggaaggcagagcacatggagtggagaaccaccctcg
gcacatgcgcagattatttgtttaccacttagaacacagctgtcagcgcc
atcttgtaacggcgaatgtgggcgcggctcccaacagaggggagaggaga
aaagaggagagaggaggagagaggaggagaagagagagagaactagaaat
gggattaggctagaactttcaaagcccacctcagtcttcctccaacaagg
ctgtctcatgaaggtccccaaacagggccaacaaccagggacccaatgtt
taaattcatgagtttgtggaagacattcttcagtcaaaagcccatgggtg
ggaagctgggaagaaagctcgaccagtgaagtgcctgccttgcagatatg
agcaccctagtcccatcccaggaaccactaaacatgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_116249741_116250960
seq2: B6Ng01-132A07.b_48_1236

seq1  GAATTCAACCCCCAGCACCTCTACAGTGCCTTATAACTCTGTTAATTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCCCCAGCACCTCTACAGTGCCTTATAACTCTGTTAATTACA  50

seq1  GTCTCAGGGGATCTGAAGCCTTCTTTTGACCTTCTCGGGCACCAGACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAGGGGATCTGAAGCCTTCTTTTGACCTTCTCGGGCACCAGACATA  100

seq1  TAGGCGGTACACATACATATATGTAGGCAGATATGCACACATAAGATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCGGTACACATACATATATGTAGGCAGATATGCACACATAAGATAAT  150

seq1  GAAACAAATCTTAAAAAGTCAAAACACACCATTAACAAAAACCCAGACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAAATCTTAAAAAGTCAAAACACACCATTAACAAAAACCCAGACAA  200

seq1  AAAAATCATAATCAGAAGAACTGAACAGGCTGTGAGTTTCATCTCTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCATAATCAGAAGAACTGAACAGGCTGTGAGTTTCATCTCTCTGC  250

seq1  CTTCAGCAAGACATCCTAAGGGAGAAATAGAAAGGAAGACAGAGTGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCAAGACATCCTAAGGGAGAAATAGAAAGGAAGACAGAGTGTGAT  300

seq1  AAAATTAAATAAACATATTTTGCACTTAAGTAAAAAACAGTTTTATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAATAAACATATTTTGCACTTAAGTAAAAAACAGTTTTATTTCA  350

seq1  TAGATTTTCTTTCTACTTGCTGTGCATTGTTGGGCAGGTTTCATAGTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTCTTTCTACTTGCTGTGCATTGTTGGGCAGGTTTCATAGTTGC  400

seq1  TATGGTTTCCAGTTTCATATTCACAGTCAAAGGGTTAGAGAGATGAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTCCAGTTTCATATTCACAGTCAAAGGGTTAGAGAGATGAATCA  450

seq1  GTGGTAAAAGCAAAAAGTACCTGAGTTTGCTTTCCAGAACTTAAGTTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAAAAGCAAAAAGTACCTGAGTTTGCTTTCCAGAACTTAAGTTAAG  500

seq1  GTTGGCTCTTTTGAGAGTAACAGGGATCTGATGCCCTCTTCTGGTCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTCTTTTGAGAGTAACAGGGATCTGATGCCCTCTTCTGGTCTCTA  550

seq1  TGGGCACTGCACTCAATTGCATAGACACACAGGCATGCAAACATAATTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACTGCACTCAATTGCATAGACACACAGGCATGCAAACATAATTAA  600

seq1  ACAGAAAATCAAGTCTTTGCACAACACAGATAAAGACAGTTACTCACTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAAATCAAGTCTTTGCACAACACAGATAAAGACAGTTACTCACTTA  650

seq1  TAGGCTAATAAGAGGGTTAAATTAAAGTGATATTCATGAAGTTCCTAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAATAAGAGGGTTAAATTAAAGTGATATTCATGAAGTTCCTAAAA  700

seq1  ATGTCTTATACAAAGACAAAAATCAACAAAATGGAAATTATAGTTTATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTTATACAAAGACAAAAATCAACAAAATGGAAATTATAGTTTATAG  750

seq1  TTTAACTACTTGTTCATAAAAACGACTCTAATATTTTCATGTTAACACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTACTTGTTCATAAAAACGACTCTAATATTTTCATGTTAACACAA  800

seq1  GTGAAACCTCTGTGAAGAGATGTATTGAGTTCTGTAAAGCTAAGAATACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAACCTCTGTGAAGAGATGTATTGAGTTCTGTAAAGCTAAGAATACT  850

seq1  CTGAGGACAGAGATGGGATTGTGGGCAGTGTTTGGTATCCTGGCTTAGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGACAGAGATGGGATTGTGGGCAGTGTTTGGTATCCTGGCTTAGAG  900

seq1  TTCCCCCTATGAACTCTTTGGTGAACGCTTCTTTATTATTTTTGATGGAG  950
      ||||||||||||||||||||||||||||||||||||   |||||||||||
seq2  TTCCCCCTATGAACTCTTTGGTGAACGCTTCTTTAT--ATTTTGATGGAG  948

seq1  TTGAGAATCTGGAATATACAGTCCAGAGAGATGACTCAGTGGTTAAAAGT  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TTGAGAATCTGGAATATACAGTCCAGAGAGATGACTCAGTGGTT-AAAGT  997

seq1  GTATAGTGTGTTCATAGCCACACCCACCCCATCAGGTAGCTCACAACTGT  1050
      ||||||||||||||||||||||||   ||||||| |||||||||||||||
seq2  GTATAGTGTGTTCATAGCCACACC--ACCCATCA-GTAGCTCACAACTGT  1044

seq1  CTGCAGCTTCAGCTCCAGGGGTATCTCTTTTGCTTCTACAGGGGCATGAA  1100
      ||||||||||||||||| ||||||||| |||||||||||| |||||||||
seq2  CTGCAGCTTCAGCTCCA-GGGTATCTC-TTTGCTTCTACA-GGGCATGAA  1091

seq1  TGCATTGCATAGAAACACACACACACACACACACACACACACACACACAC  1150
      |||||||||| ||||||  |||   ||  |||||       ||| ||| |
seq2  TGCATTGCAT-GAAACAACCACCAGCATGCACAC-------CACCCAC-C  1132

seq1  ACGTTTGATTTTGTAACTAATTAAAATTTATGTGTGTGTTCATTTTGACT  1200
      |||  |||||   | ||||||||||||      ||| | |||   |||||
seq2  ACG--TGATT---TGACTAATTAAAAT-----AGTGGGGTCA---TGACT  1169

seq1  GCATATTTGTCTGTGTACCA  1220
      ||| ||||||||||||||||
seq2  GCAAATTTGTCTGTGTACCA  1189


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