BAC Information

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BAC

Clone NameB6Ng01-132A10
Chromosome9 (Build37)
Map Location 19,552,730 - 19,553,879
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr24, Olfr828, Olfr829, Olfr830, Olfr831-ps1, Olfr832, GA_x5J8B7W6RL5-13870817-13871726, Olfr834, Olfr835, Olfr836, Olfr837, GA_x5J8B7W6RL5-13695863-13696754, Olfr839-ps1, GA_x5J8B7W6RL5-13645512-13646298, Olfr841-ps1, Olfr842-ps1, Olfr843, Olfr845, Olfr1522-ps1, Olfr846, LOC665697, Olfr847, GA_x5J8B7W6RL5-13451244-13452122, Olfr849, Olfr850, Olfr851, Olfr852-ps1, Olfr853, Olfr854, Olfr855, Zfp75, EG624341, LOC665751, Olfr857, Olfr858-ps1
Downstream geneOlfr58, Olfr859, Olfr860, GA_x5J8B7W6RL5-13004417-13003354, Olfr862, Olfr77, EG665823, Olfr863-ps1, Olfr864-ps1, Olfr865-ps1, Olfr866, Olfr867, Olfr868, Olfr869, Olfr870, Olfr871, Olfr872, Olfr39, Olfr873, Olfr18, Zfp560, 4921534A09Rik, EG624824, Zfp26, Zfp426, 5730601F06Rik, 7030419G21Rik, LOC100041205, 2210010B09Rik, 5730577I03Rik, Fbxl12, Ubl5, Pin1, Olfm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132A10.bB6Ng01-132A10.g
ACCDH932938DH932939
length1,1201,246
definitionDH932938|Mus musculus domesticus DNA, BAC clone: B6Ng01-132A10, 5' end.DH932939|Mus musculus domesticus DNA, BAC clone: B6Ng01-132A10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctcagagtcattgtgaattcagatctataatatatcctctggt
tattggcctcatcaatagtgtcaggaatatgtgttctcacagagtacgaa
ttagttcttatggtaatacagatgggtactctcatactatccatagtatt
acaccaatgagcaatttgtcaagctcattgtgttatagttgtaaggttta
cagttggatgaggttgataaccaaccctgctcccagtgatttaaatatta
tgttccaaatctataaaatctagccagtaggagtgaacatttcaggccaa
tatcaactgttatctccatgttctgtgattaagcatgtggcaccttcagg
aatggggtttgactatcgagttctggggggttattaagattacttaacaa
tagcctataatgctaagggtctatgggataaaaatggataataactcact
aaaggctaacttaataccattacatttttgacaaaggctcaaattatctg
ctactttgtcttaatgattagtctttcggctgaatgagaagaaatttaaa
tgtagatttcatttgcatttcagtgatggttaatgagattaaatattttt
ccccaacttgcactttttttcatgagatttatttgttcattatgttaccc
catttttggtgggttttttttttacatattagttttttgttctttgtatg
ttcttcacatttgtttcctatcagatgtacagtgacaaaaatattctccc
attttgtaggttttaacttccgtcaattgtttcctttgttctgcagaaac
atttaaattttatacaatctcatttgaaatttgtcattattttctgactt
ataggattcttattcagaaagttactaacaattctaggatctttttcttg
tattaaaacctttttccatatatatttgatcatgatttccttgccaaatt
gtacaagaatttctacacttccctggcaactatttatgttctttttcaaa
ctgtcttttaaaacaagcaaacagcatttgggtttacattttaaatctgc
agtacatttaaaggttgcgacggaagataaactgattttaaatcaagatt
tcaaatctaaaaaaaaaaaa
gaattcatgaagttgaaaaccttttataaagcaaaggacactgtcaatag
ggcaaaatggaaaccctatagatttaaaaatatctttcccctcctcacct
ccaataaagggctattgtatatatccaatatataaaaagaactcaataag
tttgagtccagataatcaagtaaacttaataaaaatagggtacagagcta
aacaaagaattctcaactgaggaatttcaaatggacgagaaggacctata
gaaattttccgcatccttattcatcagagaattgcaagccaaaacaaccc
tgaaattcgacctcagaccagtcagaatggagaagataaaaaactcaggt
gacagcagatgctggtaaggatatggaaaaggaggaagactcctccatta
ctggtggattgtgatctgtaaaacctatttggaagtcaatctggcagttc
cttagataattggaagtagttctacctgaagatccagctatatcattctt
ggcatacacccaaaagatgctccaacatttaacaaggacatatgctccac
tatgtttctaggagccttatttataatatccagaagctggaaacaaccta
gatgtccctcaacagagaaatagatacagaaaatgtggtaaatttacaca
atggaatactactcagctattaaaaaaatgacaatgaaatttgaaggcaa
acggatagaactaaaaaatatcatcctgagtgaggtgacccagttacaaa
agaaaacacgtggtatgcactcactgatgagtgaatattagcccagaaaa
aaagattattattcaaacataattttataataatttgataatgataacaa
ataaataataattaatgatttataataaattataaatttatctatattta
ataatttcataattattttttatatatttggataatttctttttctaaaa
tgatttagattaaatcctatcagtttataagccataattaatgtcaaatt
taaaatacaaaatttccataagaaaattcagaggttaaactcattgcata
ggaattaaatttttttgaaaaaggtgcttaagcagttacatatcttttag
aagatagtaatatagtatgatgtgtatgactaaaagagactacgaggcta
atactacatttactttaggatacgtttgacttagttgtatgtttggattc
cattgggaaagagagaaactcgtgagtgaaattttcaagagaacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_19552730_19553879
seq2: B6Ng01-132A10.b_50_1169

seq1  GAATTCTCTCAGAGTCATTGTGAATTCAGATCTATAATATATCCTCTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCAGAGTCATTGTGAATTCAGATCTATAATATATCCTCTGGT  50

seq1  TATTGGCCTCATCAATAGTGTCAGGAATATGTGTTCTCACAGAGTACGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGCCTCATCAATAGTGTCAGGAATATGTGTTCTCACAGAGTACGAA  100

seq1  TTAGTTCTTATGGTAATACAGATGGGTACTCTCATACTATCCATAGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTTCTTATGGTAATACAGATGGGTACTCTCATACTATCCATAGTATT  150

seq1  ACACCAATGAGCAATTTGTCAAGCTCATTGTGTTATAGTTGTAAGGTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAATGAGCAATTTGTCAAGCTCATTGTGTTATAGTTGTAAGGTTTA  200

seq1  CAGTTGGATGAGGTTGATAACCAACCCTGCTCCCAGTGATTTAAATATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGATGAGGTTGATAACCAACCCTGCTCCCAGTGATTTAAATATTA  250

seq1  TGTTCCAAATCTATAAAATCTAGCCAGTAGGAGTGAACATTTCAGGCCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAAATCTATAAAATCTAGCCAGTAGGAGTGAACATTTCAGGCCAA  300

seq1  TATCAACTGTTATCTCCATGTTCTGTGATTAAGCATGTGGCACCTTCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAACTGTTATCTCCATGTTCTGTGATTAAGCATGTGGCACCTTCAGG  350

seq1  AATGGGGTTTGACTATCGAGTTCTGGGGGGTTATTAAGATTACTTAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGGTTTGACTATCGAGTTCTGGGGGGTTATTAAGATTACTTAACAA  400

seq1  TAGCCTATAATGCTAAGGGTCTATGGGATAAAAATGGATAATAACTCACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTATAATGCTAAGGGTCTATGGGATAAAAATGGATAATAACTCACT  450

seq1  AAAGGCTAACTTAATACCATTACATTTTTGACAAAGGCTCAAATTATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCTAACTTAATACCATTACATTTTTGACAAAGGCTCAAATTATCTG  500

seq1  CTACTTTGTCTTAATGATTAGTCTTTCGGCTGAATGAGAAGAAATTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTGTCTTAATGATTAGTCTTTCGGCTGAATGAGAAGAAATTTAAA  550

seq1  TGTAGATTTCATTTGCATTTCAGTGATGGTTAATGAGATTAAATATTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATTTCATTTGCATTTCAGTGATGGTTAATGAGATTAAATATTTTT  600

seq1  CCCCAACTTGCACTTTTTTTCATGAGATTTATTTGTTCATTATGTTACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACTTGCACTTTTTTTCATGAGATTTATTTGTTCATTATGTTACCC  650

seq1  CATTTTTGGTGGGTTTTTTTTTTACATATTAGTTTTTTGTTCTTTGTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTGGTGGGTTTTTTTTTTACATATTAGTTTTTTGTTCTTTGTATG  700

seq1  TTCTTCACATTTGTTTCCTATCAGATGTACAGTGACAAAAATATTCTCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACATTTGTTTCCTATCAGATGTACAGTGACAAAAATATTCTCCC  750

seq1  ATTTTGTAGGTTTTAACTTCCGTCAATTGTTTCCTTTGTTCTGCAGAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTAGGTTTTAACTTCCGTCAATTGTTTCCTTTGTTCTGCAGAAAC  800

seq1  ATTTAAATTTTATACAATCTCATTTGAAATTTGTCATTATTTTCTGACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATTTTATACAATCTCATTTGAAATTTGTCATTATTTTCTGACTT  850

seq1  ATAGGATTCTTATTCAGAAAGTTACTAACAATTCTAGGATCTTTTTCTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGATTCTTATTCAGAAAGTTACTAACAATTCTAGGATCTTTTTCTTG  900

seq1  TATTAAAACCTTTTTCCATATATATTTGATCATGATTTCCTTGCCAAATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAACCTTTTTCCATATATATTTGATCATGATTTCCTTGCCAAATT  950

seq1  GTACAAGAATTTCTACACTTCCCTGGCAAACCTATTTTATGTTCTTTTTT  1000
      |||||||||||||||||||||||||||||  ||| |||||||||||||| 
seq2  GTACAAGAATTTCTACACTTCCCTGGCAA--CTA-TTTATGTTCTTTTT-  996

seq1  CAAAACTGTCTTTTAAAACAAAGCAAAACAGCATTTGGGGTTTTACATTT  1050
        ||||||||||||||||| |||| ||||||||||||||  |||||||||
seq2  -CAAACTGTCTTTTAAAAC-AAGC-AAACAGCATTTGGG--TTTACATTT  1041

seq1  TAAAAATCTGCAAGTACATTTTAAAAGTCTGCAAAAACAGAAAGATAAAA  1100
      |  |||||||| |||||||||  ||||  ||| |     | ||||| |||
seq2  T--AAATCTGC-AGTACATTT--AAAGGTTGCGA----CGGAAGAT-AAA  1081

seq1  CTGAATTTATTAAATCAAAAGATTATACAAAAATATCTAAAAAAAAAAAA  1150
      ||||   | |||||||  |||||  | |||    ||||||||||||||||
seq2  CTGA---TTTTAAATC--AAGAT--TTCAA----ATCTAAAAAAAAAAAA  1120