BAC Information

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BAC

Clone NameB6Ng01-139O22
Chromosome9 (Build37)
Map Location 105,042,067 - 105,042,978
singlet/doubletsinglet
Overlap genenone
Upstream geneHmgb1-rs16, Acpp, LOC100040921, Cpne4, Mrpl3, Nudt16
Downstream gene1700080E11Rik, Nek11, Aste1, Atp2c1, EG434434, LOC664981, Pik3r4, E330026B02Rik, EG665033, 1110001D15Rik, LOC669311
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139O22.bB6Ng01-139O22.g
ACCDH938792DH938793
length9111,045
definitionDH938792|Mus musculus domesticus DNA, BAC clone: B6Ng01-139O22, 5' end.DH938793|Mus musculus domesticus DNA, BAC clone: B6Ng01-139O22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagccagagaaacaggacctagaaggcatgtggggagaaggctgt
ttctctttggtagacttcctgtggcctgaaggccatgacagtctctgtta
ccctgcatggctcacacccttctacctagtgtgttaactacaataaccca
ctttttcttttcctcttatggaatgagccacacccagcatcttccacgtg
gctcaaactctgatgctctgagaatggtatcaagggtgaaatgctcatat
cctgttctggtgtttcactcatcagataaccagaatatttggggtacaga
ttttaatactttctgtgcaataacccccctttcccattctcctctcactg
tcttagttagggttttactgctgtgaacagacaccatgaccaaggcaagt
cttaaaatggcaacatttaattggggctggcttacaggttcagaggttca
gtccagtatcatcaaggcaggaacatggcagtatccaggcaggcatgata
ctggaggagctgagagttctacatcttcatctgaaggctgctagcaggat
actcacttccaggcagctaggaaaagggtcttaaatcccacacccacagt
gacacacctacttcaacaaggccacccctcctgatagtgccactacaagc
cattactctaaccctgtctgtttcacttagccttcctcagagcccgagtt
cagtaacaggagacattcctccttcccagcatggtcctgccaggagaagg
tagctttgcctcaaacctggcaactgacaaggactggggctcagagagaa
tgaagtctgagagtgatgtctgtgaagagggaaagtgcaaggttgagaag
tagaaatttcttgctgattctgctaagagaggaatgagtgtgtgagttgt
gtgtgtgtgtg
gaattcagttgtctgggaggtatttcacactgtaaaatattgatttcaat
cagacccctttattttcaagatccgtgactgtttcagggaagtccattgg
gtctcataaaataagagggagcatattcctgacaaatggtcccttcctgg
gacactctggtctgggtgatgcgctggaagcatgagagtggctgagagca
gtttccaatggtgtttctaaaagaacagttgggagcaaagagccttctga
gatacttgtccctagacaagagctgaaggagaggtcactgggagtgtggc
caccagtcttgcaatccctgtttcgcgcaagcagcttcttcgactgaaca
aataggagtttcttcaataaaggaaggacacctctaggatgtgggtggta
ttgttctctttcaagcgtagacagagacttcatagcctccaaagaacttg
aagagtgcgatcttggctttgagcccacgggagtctatctatctacctat
ctactatctatctatctatctatctatctatctatctatctatctatcta
ttatctatctatctatctatctatctatctatctatctatctatctacct
atctactatctatctatctatctatctatctatctatctatctatctatc
atctattatctatctatctatctatctatctatctatctatctatctatc
tacctatccatccatctatctatctactatctatctatctatctatctat
ctatctatctacctatctatccatctatctatctattcatccatctatct
atctacctatcttctatctatctatctatctatctatctatctatctatc
tatctatatctatctatctatctatctatctatctatcatctatctatct
actatctatctatctatctatctatctatctatctactactactactact
acttatcatcatcatcatccatcatcatcatcatcactactacctaccta
ctatcatcatcatcatcattcatcatcatcatcatcacttctaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_105042067_105042978
seq2: B6Ng01-139O22.b_48_958

seq1  GAATTCAGCCAGAGAAACAGGACCTAGAAGGCATGTGGGGAGAAGGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCCAGAGAAACAGGACCTAGAAGGCATGTGGGGAGAAGGCTGT  50

seq1  TTCTCTTTGGTAGACTTCCTGTGGCCTGAAGGCCATGACAGTCTCTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTTTGGTAGACTTCCTGTGGCCTGAAGGCCATGACAGTCTCTGTTA  100

seq1  CCCTGCATGGCTCACACCCTTCTACCTAGTGTGTTAACTACAATAACCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCATGGCTCACACCCTTCTACCTAGTGTGTTAACTACAATAACCCA  150

seq1  CTTTTTCTTTTCCTCTTATGGAATGAGCCACACCCAGCATCTTCCACGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTTTCCTCTTATGGAATGAGCCACACCCAGCATCTTCCACGTG  200

seq1  GCTCAAACTCTGATGCTCTGAGAATGGTATCAAGGGTGAAATGCTCATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAACTCTGATGCTCTGAGAATGGTATCAAGGGTGAAATGCTCATAT  250

seq1  CCTGTTCTGGTGTTTCACTCATCAGATAACCAGAATATTTGGGGTACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCTGGTGTTTCACTCATCAGATAACCAGAATATTTGGGGTACAGA  300

seq1  TTTTAATACTTTCTGTGCAATAACCCCCCTTTCCCATTCTCCTCTCACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATACTTTCTGTGCAATAACCCCCCTTTCCCATTCTCCTCTCACTG  350

seq1  TCTTAGTTAGGGTTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTTAGGGTTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGT  400

seq1  CTTAAAATGGCAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATGGCAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCA  450

seq1  GTCCAGTATCATCAAGGCAGGAACATGGCAGTATCCAGGCAGGCATGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTATCATCAAGGCAGGAACATGGCAGTATCCAGGCAGGCATGATA  500

seq1  CTGGAGGAGCTGAGAGTTCTACATCTTCATCTGAAGGCTGCTAGCAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGAGCTGAGAGTTCTACATCTTCATCTGAAGGCTGCTAGCAGGAT  550

seq1  ACTCACTTCCAGGCAGCTAGGAAAAGGGTCTTAAATCCCACACCCACAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTTCCAGGCAGCTAGGAAAAGGGTCTTAAATCCCACACCCACAGT  600

seq1  GACACACCTACTTCAACAAGGCCACCCCTCCTGATAGTGCCACTACAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACCTACTTCAACAAGGCCACCCCTCCTGATAGTGCCACTACAAGC  650

seq1  CATTACTCTAACCCTGTCTGTTTCACTTAGCCTTCCTCAGAGCCCGAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACTCTAACCCTGTCTGTTTCACTTAGCCTTCCTCAGAGCCCGAGTT  700

seq1  CAGTAACAGGAGACATTCCTCCTTCCCAGCATGGTCCTGCCAGGAGAAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACAGGAGACATTCCTCCTTCCCAGCATGGTCCTGCCAGGAGAAGG  750

seq1  TAGCTTTGCCTCAAACCTGGCAACTGACAAGGACTGGGGCTCAGGAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TAGCTTTGCCTCAAACCTGGCAACTGACAAGGACTGGGGCTCA-GAGAGA  799

seq1  ATGAAGTCTGAGAGTGATGTCTGTGAAGAGGGAAAGTGCAAGGTTGAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTCTGAGAGTGATGTCTGTGAAGAGGGAAAGTGCAAGGTTGAGAA  849

seq1  GTAGAAATTTCTTGCTGATTCTGCTAAGAGAGGAATGAGTGTGTGAGTTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAATTTCTTGCTGATTCTGCTAAGAGAGGAATGAGTGTGTGAGTTG  899

seq1  TGTGTGTGTGTG  912
      ||||||||||||
seq2  TGTGTGTGTGTG  911