BAC Information

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BAC

Clone NameB6Ng01-140F10
Chromosome9 (Build37)
Map Location 12,147,290 - 12,148,278
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039989
Downstream geneLOC622505, LOC100039680, LOC665285, LOC100039729
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140F10.bB6Ng01-140F10.g
ACCDH939095DH939096
length1,240988
definitionDH939095|Mus musculus domesticus DNA, BAC clone: B6Ng01-140F10, 5' end.DH939096|Mus musculus domesticus DNA, BAC clone: B6Ng01-140F10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggtatactgacagaggctaacagactcacacaaggaacaagc
tcctgccagagacagctagaacatcaaacaccagagattaccagatggcg
aaaagcaaacataagaatcttactaacagaaaccaagatcactgggcatc
atcagaacccagtacgcccaccagagtgagtcctatataccccaacacac
ccaaaaatcaagactcagatttaaaatcatatatcatgattgtggtagaa
gattttaaaaaaggacattaataactaacttaaagaactacaggcaaaca
ctgccaaacaggtagaagtccttaaagaggaaatacagacatcccttaaa
gaattacaaaaaaacacaacctaacaagtgatggaattgaacaaaaccat
ccaagatctaaaaatggaagtataaacaatgaataaaaccgaaagggaga
caactctgaagatagaaaccctaggaaagaaatcaggaaccatagatgtg
accatcagcaacagaatacaagagatggaagagagaatctcaggttcaga
agattgcatagggaacatggacataacaatcaaagaaaatgcaaaatgca
aaaagatcctaactcaaaacatccaggaaatccagtacacaacgagaaga
gcaaacctacagataataggagtagataagaatgaagatttccaacttaa
agggccaacaaatatcttcaacaaaattatagaagaaaacttcctgaacc
taaagaaagagatgcccatgaagaagcctatagaattccaaatagactgg
accagaaaagaaagtcctccacataataatcagaacaacaaatgcactaa
ataaagacagaatattaaaagcaaaaggaaaaaaggtcaagtaacatgta
aaggcaggcctattagagttattccagacttctctctagatactatgaaa
accagaaaatcctagacagatgtatacagaccctagagaacacagtgcca
gctcaggcctctatatcctgcaattctcataccataaatggaaaaccacg
tattcatgacacccaattcacccaatatctttccacgagatgaactatac
cctagaaaagagaacttatcttcacagactaaaagaacgccacagaacgg
attcaatacacgaaataacgaagcagaagcgtcttattcctgactcatag
cattccgataagcatggcctgatcctgctcacgcaacagg
gaattcaccatccaagatttcaaaacagatatcttatgcaaagaaacaga
cctgactggaatcctttgtcattttttttttttgaaaagattttttgcat
caaaagagtctgatggatctatggcaagtcttgaatacactatgcagctg
aggctggtcttcaactcctgattctcaattatgcatctcccgggggttag
aatttcaaagtgtgcattactatgctcagttcctgcagtgaagacaacca
aattcagcttgatatacatgtaggaacagaatttgtgaactgtgctacat
tgttatttttgtaaatttatatttaaaaccagggaaatgttataacttag
atttagggttagggttttccacctgggttaggtttttataacttgatttg
cattgaaacttgaaaggggtagagataagaaattactccatcaatactga
ctgtgtatgattaggtaagaacatttataaatatgaaaattatttagagc
tgagaagatggttcagttaaaaactacttagcattcaaaatgagcattca
acatgagaacctaagatgaatcaacagaactcgcagaatcactgggttaa
caaaaactagagagagagttctgtgattcagagcacttcctgtttttcca
gaagacttggattcaattctctgcatccaaagggatgctcacaaccagtt
ccaggtgatccaaaatcctattctgacctccttggtcaataggtatatac
atggtactaataaaggcaggtaggacattaatgcacataaataaagaaga
ccagcagtctcaactaacccagaccccagggagctcctagagactgaggc
accaatgaagaacacataccggctggtccgaggcccctggcacatatgta
gcagaggtctacgtggtctgacctccgtggaagatatatttaatcctgga
gtgcttgggtcttaggaaagggggaggtctgtagcacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr9_12147290_12148278
seq2: B6Ng01-140F10.g_69_1056

seq1  GAATTCACCATCCAAGATTTCAAAACAGATATCTTATGCAAAGAAACAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCATCCAAGATTTCAAAACAGATATCTTATGCAAAGAAACAGA  50

seq1  CCTGACTGGAATCCTTTGTCATTTTTTTTTTTTGAAAAGATTTTTTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTGGAATCCTTTGTCATTTTTTTTTTTTGAAAAGATTTTTTGCAT  100

seq1  CAAAAGAGTCTGATGGATCTATGGCAAGTCTTGAATACACTATGCAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAGTCTGATGGATCTATGGCAAGTCTTGAATACACTATGCAGCTG  150

seq1  AGGCTGGTCTTCAACTCCTGATTCTCAATTATGCATCTCCCGGGGGTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGTCTTCAACTCCTGATTCTCAATTATGCATCTCCCGGGGGTTAG  200

seq1  AATTTCAAAGTGTGCATTACTATGCTCAGTTCCTGCAGTGAAGACAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAAAGTGTGCATTACTATGCTCAGTTCCTGCAGTGAAGACAACCA  250

seq1  AATTCAGCTTGATATACATGTAGGAACAGAATTTGTGAACTGTGCTACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGCTTGATATACATGTAGGAACAGAATTTGTGAACTGTGCTACAT  300

seq1  TGTTATTTTTGTAAATTTATATTTAAAACCAGGGAAATGTTATAACTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTTTGTAAATTTATATTTAAAACCAGGGAAATGTTATAACTTAG  350

seq1  ATTTAGGGTTAGGGTTTTCCACCTGGGTTAGGTTTTTATAACTTGATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGGTTAGGGTTTTCCACCTGGGTTAGGTTTTTATAACTTGATTTG  400

seq1  CATTGAAACTTGAAAGGGGTAGAGATAAGAAATTACTCCATCAATACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGAAACTTGAAAGGGGTAGAGATAAGAAATTACTCCATCAATACTGA  450

seq1  CTGTGTATGATTAGGTAAGAACATTTATAAATATGAAAATTATTTAGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATGATTAGGTAAGAACATTTATAAATATGAAAATTATTTAGAGC  500

seq1  TGAGAAGATGGTTCAGTTAAAAACTACTTAGCATTCAAAATGAGCATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGATGGTTCAGTTAAAAACTACTTAGCATTCAAAATGAGCATTCA  550

seq1  ACATGAGAACCTAAGATGAATCAACAGAACTCGCAGAATCACTGGGTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGAACCTAAGATGAATCAACAGAACTCGCAGAATCACTGGGTTAA  600

seq1  CAAAAACTAGAGAGAGAGTTCTGTGATTCAGAGCACTTCCTGTTTTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACTAGAGAGAGAGTTCTGTGATTCAGAGCACTTCCTGTTTTTCCA  650

seq1  GAAGACTTGGATTCAATTCCCTGCATCCAAAGGGATGCTCACAACCAGTT  700
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GAAGACTTGGATTCAATTCTCTGCATCCAAAGGGATGCTCACAACCAGTT  700

seq1  CCAGGTGATCCAAAATCCTATTCTGACCTCCTTGGTCAATAGGTATATAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGATCCAAAATCCTATTCTGACCTCCTTGGTCAATAGGTATATAC  750

seq1  ATGGTACTAATAAAGGCAGGTAGGACATTAATGCACATAAATAAAGAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTACTAATAAAGGCAGGTAGGACATTAATGCACATAAATAAAGAAGA  800

seq1  CCAGCAGTCTCAACTAACCCAGACCCCAGGGAGCTCCTAGAGACTGAGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGTCTCAACTAACCCAGACCCCAGGGAGCTCCTAGAGACTGAGGC  850

seq1  ACCAATGAAGAACACATACCGGCTGGTCCGAGGCCCCTGGCACATATGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGAAGAACACATACCGGCTGGTCCGAGGCCCCTGGCACATATGTA  900

seq1  GCAGAGGTCTACGTGGTCTGACCTCCGTGGAAGATATATTTAATCCTGGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGTCTACGTGGTCTGACCTCCGTGGAAGATATATTTAATCCTGGA  950

seq1  GTGCCTTGGGTCTTAGGAAAGGGGGAGGTCTGTAGCACC  989
      ||| |||||||||||||||||||||||||||||||||||
seq2  GTG-CTTGGGTCTTAGGAAAGGGGGAGGTCTGTAGCACC  988